RNA–Protein interactions for RNA: ENST00000546774.1

CALCOCO1-205, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-205ENST00000546774 CCDC61Q9Y6R9 512 aa11.78□□□□□ -0.52
CALCOCO1-205ENST00000546774 ROCK2O75116 1388 aaKnown RBP11.78□□□□□ -0.52
CALCOCO1-205ENST00000546774 ATRNO75882 1429 aa11.77□□□□□ -0.52
CALCOCO1-205ENST00000546774 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.77□□□□□ -0.52
CALCOCO1-205ENST00000546774 SRPK2P78362 688 aaKnown RBP11.77□□□□□ -0.53
CALCOCO1-205ENST00000546774 RGS12O14924 1447 aa11.77□□□□□ -0.53
CALCOCO1-205ENST00000546774 PLCH1Q4KWH8 1693 aa11.76□□□□□ -0.53
CALCOCO1-205ENST00000546774 PLEKHG3A1L390 1219 aa11.76□□□□□ -0.53
CALCOCO1-205ENST00000546774 CABP2Q9NPB3 220 aa11.76□□□□□ -0.53
CALCOCO1-205ENST00000546774 ACEP12821 1306 aa11.76□□□□□ -0.53
CALCOCO1-205ENST00000546774 SLIT2O94813 1529 aa11.76□□□□□ -0.53
CALCOCO1-205ENST00000546774 NWD2Q9ULI1 1742 aa11.75□□□□□ -0.53
CALCOCO1-205ENST00000546774 FAM83GA6ND36 823 aa11.75□□□□□ -0.53
CALCOCO1-205ENST00000546774 UNC5CLQ8IV45 518 aa11.75□□□□□ -0.53
CALCOCO1-205ENST00000546774 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
CALCOCO1-205ENST00000546774 TONSLQ96HA7 1378 aa11.75□□□□□ -0.53
CALCOCO1-205ENST00000546774 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
CALCOCO1-205ENST00000546774 UPF1Q92900 1129 aaKnown RBP eCLIP11.74□□□□□ -0.53
CALCOCO1-205ENST00000546774 POLR3AO14802 1390 aaPredicted RBP11.74□□□□□ -0.53
CALCOCO1-205ENST00000546774 MSH5O43196 834 aa11.73□□□□□ -0.53
CALCOCO1-205ENST00000546774 NUTM2GQ5VZR2 741 aa11.73□□□□□ -0.53
CALCOCO1-205ENST00000546774 PPIP5K1Q6PFW1 1433 aa11.73□□□□□ -0.53
CALCOCO1-205ENST00000546774 EVC2Q86UK5 1308 aa11.73□□□□□ -0.53
CALCOCO1-205ENST00000546774 CARD11Q9BXL7 1154 aa11.72□□□□□ -0.53
CALCOCO1-205ENST00000546774 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
CALCOCO1-205ENST00000546774 CABP1Q9NZU7 370 aa11.72□□□□□ -0.53
CALCOCO1-205ENST00000546774 BRWD3Q6RI45 1802 aa11.72□□□□□ -0.53
CALCOCO1-205ENST00000546774 COL14A1Q05707 1796 aaKnown RBP11.72□□□□□ -0.53
CALCOCO1-205ENST00000546774 ABTB2Q8N961 1025 aa11.71□□□□□ -0.53
CALCOCO1-205ENST00000546774 PHRF1Q9P1Y6 1649 aaKnown RBP11.71□□□□□ -0.54
CALCOCO1-205ENST00000546774 GLI3P10071 1580 aa11.71□□□□□ -0.54
CALCOCO1-205ENST00000546774 RALGAPBQ86X10 1494 aa11.7□□□□□ -0.54
CALCOCO1-205ENST00000546774 VPS72Q15906 364 aa11.7□□□□□ -0.54
CALCOCO1-205ENST00000546774 BTG4Q9NY30 223 aa11.7□□□□□ -0.54
CALCOCO1-205ENST00000546774 CCDC9Q9Y3X0 531 aaKnown RBP11.7□□□□□ -0.54
CALCOCO1-205ENST00000546774 NRAPQ86VF7 1730 aa11.69□□□□□ -0.54
CALCOCO1-205ENST00000546774 ZC3H6P61129 1189 aaKnown RBP11.68□□□□□ -0.54
CALCOCO1-205ENST00000546774 PRDM11Q9NQV5 511 aa11.68□□□□□ -0.54
CALCOCO1-205ENST00000546774 AKAP12Q02952 1782 aa11.68□□□□□ -0.54
CALCOCO1-205ENST00000546774 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
CALCOCO1-205ENST00000546774 CHRNA2Q15822 529 aa11.67□□□□□ -0.54
CALCOCO1-205ENST00000546774 PCGF6Q9BYE7 350 aa11.67□□□□□ -0.54
CALCOCO1-205ENST00000546774 KIAA0232Q92628 1395 aa11.67□□□□□ -0.54
CALCOCO1-205ENST00000546774 ONECUT3O60422 494 aaPredicted RBP11.66□□□□□ -0.54
CALCOCO1-205ENST00000546774 NLRP13Q86W25 1043 aa11.66□□□□□ -0.54
CALCOCO1-205ENST00000546774 SEPT12Q8IYM1 358 aa11.66□□□□□ -0.54
CALCOCO1-205ENST00000546774 USP6P35125 1406 aa11.66□□□□□ -0.54
CALCOCO1-205ENST00000546774 EP400Q96L91 3159 aa11.65□□□□□ -0.54
CALCOCO1-205ENST00000546774 ZNF692Q9BU19 519 aaPredicted RBP11.65□□□□□ -0.54
CALCOCO1-205ENST00000546774 BRD4O60885 1362 aaPredicted RBP11.65□□□□□ -0.55
CALCOCO1-205ENST00000546774 SBNO2Q9Y2G9 1366 aa11.65□□□□□ -0.55
CALCOCO1-205ENST00000546774 NRKQ7Z2Y5 1582 aa11.64□□□□□ -0.55
CALCOCO1-205ENST00000546774 GCP02774 474 aa11.64□□□□□ -0.55
CALCOCO1-205ENST00000546774 NLRP6P59044 892 aa11.64□□□□□ -0.55
CALCOCO1-205ENST00000546774 PIK3C2AO00443 1686 aa11.64□□□□□ -0.55
CALCOCO1-205ENST00000546774 USP19O94966 1318 aa11.63□□□□□ -0.55
CALCOCO1-205ENST00000546774 SSH2Q76I76 1423 aa11.63□□□□□ -0.55
CALCOCO1-205ENST00000546774 A0A0G2JS52 829 aa11.63□□□□□ -0.55
CALCOCO1-205ENST00000546774 MYT1Q01538 1121 aa11.63□□□□□ -0.55
CALCOCO1-205ENST00000546774 FAM98CQ17RN3 349 aaKnown RBP11.63□□□□□ -0.55
CALCOCO1-205ENST00000546774 STRN4Q9NRL3 753 aa11.63□□□□□ -0.55
CALCOCO1-205ENST00000546774 SPATA31A5Q5VU36 1347 aa11.62□□□□□ -0.55
CALCOCO1-205ENST00000546774 SPATA31A7Q8IWB4 1347 aa11.62□□□□□ -0.55
CALCOCO1-205ENST00000546774 ST20-MTHFSA0A0A6YYL1 179 aa11.62□□□□□ -0.55
CALCOCO1-205ENST00000546774 EVA1CP58658 441 aa11.62□□□□□ -0.55
CALCOCO1-205ENST00000546774 TMC1Q8TDI8 760 aa11.62□□□□□ -0.55
CALCOCO1-205ENST00000546774 MON2Q7Z3U7 1717 aa11.62□□□□□ -0.55
CALCOCO1-205ENST00000546774 KTN1Q86UP2 1357 aaKnown RBP11.62□□□□□ -0.55
CALCOCO1-205ENST00000546774 CAMTA1Q9Y6Y1 1673 aa11.62□□□□□ -0.55
CALCOCO1-205ENST00000546774 RGPD5Q99666 1765 aa11.62□□□□□ -0.55
CALCOCO1-205ENST00000546774 TTC21BQ7Z4L5 1316 aa11.61□□□□□ -0.55
CALCOCO1-205ENST00000546774 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
CALCOCO1-205ENST00000546774 KRT27Q7Z3Y8 459 aa11.61□□□□□ -0.55
CALCOCO1-205ENST00000546774 SLC12A5Q9H2X9 1139 aa11.61□□□□□ -0.55
CALCOCO1-205ENST00000546774 CPDO75976 1380 aa11.61□□□□□ -0.55
CALCOCO1-205ENST00000546774 LMO7Q8WWI1 1683 aa11.61□□□□□ -0.55
CALCOCO1-205ENST00000546774 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
CALCOCO1-205ENST00000546774 CCDC125Q86Z20 511 aa11.6□□□□□ -0.55
CALCOCO1-205ENST00000546774 TESK2Q96S53 571 aa11.6□□□□□ -0.55
CALCOCO1-205ENST00000546774 USP35Q9P2H5 1018 aa11.6□□□□□ -0.55
CALCOCO1-205ENST00000546774 SLIT3O75094 1523 aa11.6□□□□□ -0.55
CALCOCO1-205ENST00000546774 SPATA31A1Q5TZJ5 1347 aa11.6□□□□□ -0.55
CALCOCO1-205ENST00000546774 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
CALCOCO1-205ENST00000546774 LARP1Q6PKG0 1096 aaKnown RBP11.59□□□□□ -0.55
CALCOCO1-205ENST00000546774 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.59□□□□□ -0.55
CALCOCO1-205ENST00000546774 PUS7Q96PZ0 661 aaKnown RBP11.59□□□□□ -0.55
CALCOCO1-205ENST00000546774 COL18A1P39060 1754 aa11.59□□□□□ -0.55
CALCOCO1-205ENST00000546774 CLSPNQ9HAW4 1339 aa11.59□□□□□ -0.55
CALCOCO1-205ENST00000546774 CD163L1Q9NR16 1453 aa11.58□□□□□ -0.56
CALCOCO1-205ENST00000546774 SOX12O15370 315 aa11.58□□□□□ -0.56
CALCOCO1-205ENST00000546774 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
CALCOCO1-205ENST00000546774 TIMELESSQ9UNS1 1208 aa11.58□□□□□ -0.56
CALCOCO1-205ENST00000546774 THSD7AQ9UPZ6 1657 aa11.58□□□□□ -0.56
CALCOCO1-205ENST00000546774 FAM182BQ5T319 152 aa11.57□□□□□ -0.56
CALCOCO1-205ENST00000546774 KCNH5Q8NCM2 988 aa11.57□□□□□ -0.56
CALCOCO1-205ENST00000546774 ZRANB1Q9UGI0 708 aa11.57□□□□□ -0.56
CALCOCO1-205ENST00000546774 USP47Q96K76 1375 aa11.56□□□□□ -0.56
CALCOCO1-205ENST00000546774 BLMP54132 1417 aaPredicted RBP11.56□□□□□ -0.56
CALCOCO1-205ENST00000546774 CCER1Q8TC90 406 aaPredicted RBP11.56□□□□□ -0.56
CALCOCO1-205ENST00000546774 TERF2IPQ9NYB0 399 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms