RNA–Protein interactions for RNA: ENST00000546425.1

HVCN1-204, Transcript of hydrogen voltage gated channel 1, humanhuman

TSL 3

Gene HVCN1, Length 788 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HVCN1-204ENST00000546425 PLEKHG3A1L390 1219 aa18.37■□□□□ 0.53
HVCN1-204ENST00000546425 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
HVCN1-204ENST00000546425 CABP2Q9NPB3 220 aa18.37■□□□□ 0.53
HVCN1-204ENST00000546425 PHRF1Q9P1Y6 1649 aaKnown RBP18.37■□□□□ 0.53
HVCN1-204ENST00000546425 NWD2Q9ULI1 1742 aa18.37■□□□□ 0.53
HVCN1-204ENST00000546425 ACEP12821 1306 aa18.36■□□□□ 0.53
HVCN1-204ENST00000546425 LMOD2Q6P5Q4 547 aa18.36■□□□□ 0.53
HVCN1-204ENST00000546425 NGLY1Q96IV0 654 aa18.36■□□□□ 0.53
HVCN1-204ENST00000546425 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.52
HVCN1-204ENST00000546425 CCER1Q8TC90 406 aaPredicted RBP18.33■□□□□ 0.52
HVCN1-204ENST00000546425 MON2Q7Z3U7 1717 aa18.32■□□□□ 0.52
HVCN1-204ENST00000546425 BRD4O60885 1362 aaPredicted RBP18.32■□□□□ 0.52
HVCN1-204ENST00000546425 ATAD2Q6PL18 1390 aa18.32■□□□□ 0.52
HVCN1-204ENST00000546425 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
HVCN1-204ENST00000546425 FNBP4Q8N3X1 1017 aaPredicted RBP18.32■□□□□ 0.52
HVCN1-204ENST00000546425 COL14A1Q05707 1796 aaKnown RBP18.32■□□□□ 0.52
HVCN1-204ENST00000546425 CDK12Q9NYV4 1490 aaPredicted RBP18.32■□□□□ 0.52
HVCN1-204ENST00000546425 NRKQ7Z2Y5 1582 aa18.31■□□□□ 0.52
HVCN1-204ENST00000546425 CABLES1Q8TDN4 633 aa18.31■□□□□ 0.52
HVCN1-204ENST00000546425 SLIT2O94813 1529 aa18.31■□□□□ 0.52
HVCN1-204ENST00000546425 USP21Q9UK80 565 aa18.3■□□□□ 0.52
HVCN1-204ENST00000546425 NRAPQ86VF7 1730 aa18.29■□□□□ 0.52
HVCN1-204ENST00000546425 BCL9LQ86UU0 1499 aa18.29■□□□□ 0.52
HVCN1-204ENST00000546425 RXRBP28702 533 aa18.29■□□□□ 0.52
HVCN1-204ENST00000546425 HOXD11P31277 338 aaPredicted RBP18.29■□□□□ 0.52
HVCN1-204ENST00000546425 QTRT2Q9H974 415 aaKnown RBP18.29■□□□□ 0.52
HVCN1-204ENST00000546425 CABP1Q9NZU7 370 aa18.29■□□□□ 0.52
HVCN1-204ENST00000546425 ATRNO75882 1429 aa18.29■□□□□ 0.52
HVCN1-204ENST00000546425 USP6P35125 1406 aa18.29■□□□□ 0.52
HVCN1-204ENST00000546425 PLEKHG5O94827 1062 aa18.28■□□□□ 0.52
HVCN1-204ENST00000546425 PIK3C2AO00443 1686 aa18.28■□□□□ 0.52
HVCN1-204ENST00000546425 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
HVCN1-204ENST00000546425 TRPC5Q9UL62 973 aaPredicted RBP18.27■□□□□ 0.52
HVCN1-204ENST00000546425 RBM6P78332 1123 aaKnown RBP18.26■□□□□ 0.51
HVCN1-204ENST00000546425 USP47Q96K76 1375 aa18.26■□□□□ 0.51
HVCN1-204ENST00000546425 ST20-MTHFSA0A0A6YYL1 179 aa18.25■□□□□ 0.51
HVCN1-204ENST00000546425 SLC24A1O60721 1099 aa18.25■□□□□ 0.51
HVCN1-204ENST00000546425 CPSF1Q10570 1443 aaKnown RBP18.24■□□□□ 0.51
HVCN1-204ENST00000546425 PUS7Q96PZ0 661 aaKnown RBP18.24■□□□□ 0.51
HVCN1-204ENST00000546425 SSH2Q76I76 1423 aa18.23■□□□□ 0.51
HVCN1-204ENST00000546425 USP54Q70EL1 1684 aa18.23■□□□□ 0.51
HVCN1-204ENST00000546425 ABTB2Q8N961 1025 aa18.23■□□□□ 0.51
HVCN1-204ENST00000546425 TESK2Q96S53 571 aa18.23■□□□□ 0.51
HVCN1-204ENST00000546425 ZNF692Q9BU19 519 aaPredicted RBP18.23■□□□□ 0.51
HVCN1-204ENST00000546425 RGS12O14924 1447 aa18.23■□□□□ 0.51
HVCN1-204ENST00000546425 GLI3P10071 1580 aa18.22■□□□□ 0.51
HVCN1-204ENST00000546425 UNC5CLQ8IV45 518 aa18.22■□□□□ 0.51
HVCN1-204ENST00000546425 USP19O94966 1318 aa18.22■□□□□ 0.51
HVCN1-204ENST00000546425 NUTM2GQ5VZR2 741 aa18.21■□□□□ 0.51
HVCN1-204ENST00000546425 SLIT3O75094 1523 aa18.21■□□□□ 0.51
HVCN1-204ENST00000546425 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
HVCN1-204ENST00000546425 KTN1Q86UP2 1357 aaKnown RBP18.2■□□□□ 0.5
HVCN1-204ENST00000546425 FAM83GA6ND36 823 aa18.2■□□□□ 0.5
HVCN1-204ENST00000546425 NLRP13Q86W25 1043 aa18.2■□□□□ 0.5
HVCN1-204ENST00000546425 TTC21AQ8NDW8 1320 aa18.19■□□□□ 0.5
HVCN1-204ENST00000546425 LMO7Q8WWI1 1683 aa18.18■□□□□ 0.5
HVCN1-204ENST00000546425 NINLQ9Y2I6 1382 aa18.18■□□□□ 0.5
HVCN1-204ENST00000546425 BRWD3Q6RI45 1802 aa18.18■□□□□ 0.5
HVCN1-204ENST00000546425 KIAA0232Q92628 1395 aa18.17■□□□□ 0.5
HVCN1-204ENST00000546425 GJD4Q96KN9 370 aaPredicted RBP18.17■□□□□ 0.5
HVCN1-204ENST00000546425 PRDM11Q9NQV5 511 aa18.17■□□□□ 0.5
HVCN1-204ENST00000546425 TTC21BQ7Z4L5 1316 aa18.17■□□□□ 0.5
HVCN1-204ENST00000546425 MYOM1P52179 1685 aa18.16■□□□□ 0.5
HVCN1-204ENST00000546425 TMF1P82094 1093 aa18.16■□□□□ 0.5
HVCN1-204ENST00000546425 VPS72Q15906 364 aa18.16■□□□□ 0.5
HVCN1-204ENST00000546425 TMC1Q8TDI8 760 aa18.16■□□□□ 0.5
HVCN1-204ENST00000546425 BTG4Q9NY30 223 aa18.16■□□□□ 0.5
HVCN1-204ENST00000546425 CPDO75976 1380 aa18.16■□□□□ 0.5
HVCN1-204ENST00000546425 NLRP6P59044 892 aa18.15■□□□□ 0.5
HVCN1-204ENST00000546425 HDGFL2Q7Z4V5 671 aaPredicted RBP18.15■□□□□ 0.5
HVCN1-204ENST00000546425 ZC3H6P61129 1189 aaKnown RBP18.14■□□□□ 0.49
HVCN1-204ENST00000546425 SLC12A5Q9H2X9 1139 aa18.14■□□□□ 0.49
HVCN1-204ENST00000546425 TERF2IPQ9NYB0 399 aa18.14■□□□□ 0.49
HVCN1-204ENST00000546425 A0A1W2PP64 1363 aa18.14■□□□□ 0.49
HVCN1-204ENST00000546425 EDC4Q6P2E9 1401 aaKnown RBP18.14■□□□□ 0.49
HVCN1-204ENST00000546425 LTN1O94822 1766 aa18.13■□□□□ 0.49
HVCN1-204ENST00000546425 COL18A1P39060 1754 aa18.13■□□□□ 0.49
HVCN1-204ENST00000546425 RGPD5Q99666 1765 aa18.13■□□□□ 0.49
HVCN1-204ENST00000546425 GCP02774 474 aa18.13■□□□□ 0.49
HVCN1-204ENST00000546425 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
HVCN1-204ENST00000546425 CHRNA2Q15822 529 aa18.11■□□□□ 0.49
HVCN1-204ENST00000546425 CDCA8Q53HL2 280 aa18.11■□□□□ 0.49
HVCN1-204ENST00000546425 CCDC9Q9Y3X0 531 aaKnown RBP18.11■□□□□ 0.49
HVCN1-204ENST00000546425 CAMTA1Q9Y6Y1 1673 aa18.11■□□□□ 0.49
HVCN1-204ENST00000546425 KIF20BQ96Q89 1820 aa18.11■□□□□ 0.49
HVCN1-204ENST00000546425 NFAT5O94916 1531 aa18.1■□□□□ 0.49
HVCN1-204ENST00000546425 USP31Q70CQ4 1352 aa18.1■□□□□ 0.49
HVCN1-204ENST00000546425 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
HVCN1-204ENST00000546425 KCNH5Q8NCM2 988 aa18.09■□□□□ 0.49
HVCN1-204ENST00000546425 THSD7AQ9UPZ6 1657 aa18.09■□□□□ 0.49
HVCN1-204ENST00000546425 ABCC6O95255 1503 aa18.08■□□□□ 0.49
HVCN1-204ENST00000546425 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.08■□□□□ 0.48
HVCN1-204ENST00000546425 EIF4G2P78344 907 aaKnown RBP eCLIP18.07■□□□□ 0.48
HVCN1-204ENST00000546425 WNK3Q9BYP7 1800 aa18.07■□□□□ 0.48
HVCN1-204ENST00000546425 COL5A2P05997 1499 aaPredicted RBP18.07■□□□□ 0.48
HVCN1-204ENST00000546425 SPATA31A5Q5VU36 1347 aa18.06■□□□□ 0.48
HVCN1-204ENST00000546425 SPATA31A7Q8IWB4 1347 aa18.06■□□□□ 0.48
HVCN1-204ENST00000546425 AATKQ6ZMQ8 1374 aa18.05■□□□□ 0.48
HVCN1-204ENST00000546425 ONECUT3O60422 494 aaPredicted RBP18.05■□□□□ 0.48
HVCN1-204ENST00000546425 NME9Q86XW9 330 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms