RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 DIEXFQ68CQ4 756 aaKnown RBP10.87□□□□□ -0.67
KDM1B-203ENST00000546309 UNC5CLQ8IV45 518 aa10.87□□□□□ -0.67
KDM1B-203ENST00000546309 EIF4G2P78344 907 aaKnown RBP eCLIP10.86□□□□□ -0.67
KDM1B-203ENST00000546309 GPRASP1Q5JY77 1395 aa10.86□□□□□ -0.67
KDM1B-203ENST00000546309 KIAA1210Q9ULL0 1709 aa10.84□□□□□ -0.67
KDM1B-203ENST00000546309 VPS72Q15906 364 aa10.84□□□□□ -0.67
KDM1B-203ENST00000546309 DEFB132Q7Z7B7 95 aa10.84□□□□□ -0.67
KDM1B-203ENST00000546309 PHRF1Q9P1Y6 1649 aaKnown RBP10.84□□□□□ -0.67
KDM1B-203ENST00000546309 THSD7AQ9UPZ6 1657 aa10.83□□□□□ -0.68
KDM1B-203ENST00000546309 HAP1P54257 671 aaPredicted RBP10.83□□□□□ -0.68
KDM1B-203ENST00000546309 FAM182BQ5T319 152 aa10.83□□□□□ -0.68
KDM1B-203ENST00000546309 POLR3AO14802 1390 aaPredicted RBP10.82□□□□□ -0.68
KDM1B-203ENST00000546309 CCDC125Q86Z20 511 aa10.82□□□□□ -0.68
KDM1B-203ENST00000546309 SEPT12Q8IYM1 358 aa10.82□□□□□ -0.68
KDM1B-203ENST00000546309 NUDT16Q96DE0 195 aaKnown RBP10.82□□□□□ -0.68
KDM1B-203ENST00000546309 POGKQ9P215 609 aa10.82□□□□□ -0.68
KDM1B-203ENST00000546309 TRPM1Q7Z4N2 1603 aa10.81□□□□□ -0.68
KDM1B-203ENST00000546309 COL14A1Q05707 1796 aaKnown RBP10.81□□□□□ -0.68
KDM1B-203ENST00000546309 HSPA5P11021 654 aaKnown RBP10.81□□□□□ -0.68
KDM1B-203ENST00000546309 PSME1Q06323 249 aa10.81□□□□□ -0.68
KDM1B-203ENST00000546309 SF3B2Q13435 895 aaKnown RBP10.81□□□□□ -0.68
KDM1B-203ENST00000546309 CDK19Q9BWU1 502 aa10.81□□□□□ -0.68
KDM1B-203ENST00000546309 LMO7Q8WWI1 1683 aa10.81□□□□□ -0.68
KDM1B-203ENST00000546309 CAMTA1Q9Y6Y1 1673 aa10.81□□□□□ -0.68
KDM1B-203ENST00000546309 SSH2Q76I76 1423 aa10.8□□□□□ -0.68
KDM1B-203ENST00000546309 NRKQ7Z2Y5 1582 aa10.8□□□□□ -0.68
KDM1B-203ENST00000546309 COL18A1P39060 1754 aa10.8□□□□□ -0.68
KDM1B-203ENST00000546309 TNS1Q9HBL0 1735 aaKnown RBP10.79□□□□□ -0.68
KDM1B-203ENST00000546309 CHRNA2Q15822 529 aa10.79□□□□□ -0.68
KDM1B-203ENST00000546309 BTG4Q9NY30 223 aa10.79□□□□□ -0.68
KDM1B-203ENST00000546309 CCDC9Q9Y3X0 531 aaKnown RBP10.79□□□□□ -0.68
KDM1B-203ENST00000546309 SPATA31A5Q5VU36 1347 aa10.79□□□□□ -0.68
KDM1B-203ENST00000546309 SPATA31A7Q8IWB4 1347 aa10.79□□□□□ -0.68
KDM1B-203ENST00000546309 ARHGEF10O15013 1369 aa10.78□□□□□ -0.68
KDM1B-203ENST00000546309 ITSN1Q15811 1721 aa10.78□□□□□ -0.68
KDM1B-203ENST00000546309 PLEKHG3A1L390 1219 aa10.78□□□□□ -0.68
KDM1B-203ENST00000546309 NUTM2GQ5VZR2 741 aa10.78□□□□□ -0.68
KDM1B-203ENST00000546309 CARD11Q9BXL7 1154 aa10.78□□□□□ -0.68
KDM1B-203ENST00000546309 ACEP12821 1306 aa10.78□□□□□ -0.68
KDM1B-203ENST00000546309 ROCK2O75116 1388 aaKnown RBP10.77□□□□□ -0.68
KDM1B-203ENST00000546309 KIAA0232Q92628 1395 aa10.77□□□□□ -0.68
KDM1B-203ENST00000546309 USP47Q96K76 1375 aa10.77□□□□□ -0.68
KDM1B-203ENST00000546309 QRICH2Q9H0J4 1663 aa10.77□□□□□ -0.69
KDM1B-203ENST00000546309 A0A0G2JS52 829 aa10.77□□□□□ -0.69
KDM1B-203ENST00000546309 MYT1Q01538 1121 aa10.77□□□□□ -0.69
KDM1B-203ENST00000546309 LMOD2Q6P5Q4 547 aa10.77□□□□□ -0.69
KDM1B-203ENST00000546309 BLMP54132 1417 aaPredicted RBP10.76□□□□□ -0.69
KDM1B-203ENST00000546309 FAM98CQ17RN3 349 aaKnown RBP10.76□□□□□ -0.69
KDM1B-203ENST00000546309 CABP2Q9NPB3 220 aa10.76□□□□□ -0.69
KDM1B-203ENST00000546309 USP19O94966 1318 aa10.76□□□□□ -0.69
KDM1B-203ENST00000546309 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
KDM1B-203ENST00000546309 PIK3C2AO00443 1686 aa10.75□□□□□ -0.69
KDM1B-203ENST00000546309 RGPD5Q99666 1765 aa10.75□□□□□ -0.69
KDM1B-203ENST00000546309 ZC3H6P61129 1189 aaKnown RBP10.74□□□□□ -0.69
KDM1B-203ENST00000546309 PTF1AQ7RTS3 328 aa10.74□□□□□ -0.69
KDM1B-203ENST00000546309 KRT27Q7Z3Y8 459 aa10.74□□□□□ -0.69
KDM1B-203ENST00000546309 SPATA31A1Q5TZJ5 1347 aa10.74□□□□□ -0.69
KDM1B-203ENST00000546309 WASHC2AQ641Q2 1341 aa10.74□□□□□ -0.69
KDM1B-203ENST00000546309 PEAK1Q9H792 1746 aa10.73□□□□□ -0.69
KDM1B-203ENST00000546309 NGDNQ8NEJ9 315 aaKnown RBP10.73□□□□□ -0.69
KDM1B-203ENST00000546309 CCDC61Q9Y6R9 512 aa10.73□□□□□ -0.69
KDM1B-203ENST00000546309 CCDC7Q96M83 1385 aa10.73□□□□□ -0.69
KDM1B-203ENST00000546309 SLIT3O75094 1523 aa10.73□□□□□ -0.69
KDM1B-203ENST00000546309 LARP1Q6PKG0 1096 aaKnown RBP10.72□□□□□ -0.69
KDM1B-203ENST00000546309 PPIP5K1Q6PFW1 1433 aa10.72□□□□□ -0.69
KDM1B-203ENST00000546309 CD163L1Q9NR16 1453 aa10.72□□□□□ -0.69
KDM1B-203ENST00000546309 AKAP12Q02952 1782 aa10.72□□□□□ -0.69
KDM1B-203ENST00000546309 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.69
KDM1B-203ENST00000546309 PAK3O75914 559 aaPredicted RBP10.71□□□□□ -0.69
KDM1B-203ENST00000546309 USP6P35125 1406 aa10.71□□□□□ -0.69
KDM1B-203ENST00000546309 CABP1Q9NZU7 370 aa10.71□□□□□ -0.69
KDM1B-203ENST00000546309 AXIN2Q9Y2T1 843 aa10.71□□□□□ -0.69
KDM1B-203ENST00000546309 CPDO75976 1380 aa10.7□□□□□ -0.7
KDM1B-203ENST00000546309 KIF7Q2M1P5 1343 aa10.7□□□□□ -0.7
KDM1B-203ENST00000546309 CENPJQ9HC77 1338 aaPredicted RBP10.7□□□□□ -0.7
KDM1B-203ENST00000546309 C11orf95C9JLR9 678 aaPredicted RBP10.7□□□□□ -0.7
KDM1B-203ENST00000546309 EN1Q05925 392 aaPredicted RBP10.7□□□□□ -0.7
KDM1B-203ENST00000546309 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
KDM1B-203ENST00000546309 SBF2Q86WG5 1849 aa10.7□□□□□ -0.7
KDM1B-203ENST00000546309 COL5A2P05997 1499 aaPredicted RBP10.69□□□□□ -0.7
KDM1B-203ENST00000546309 CPSF1Q10570 1443 aaKnown RBP10.69□□□□□ -0.7
KDM1B-203ENST00000546309 BAG6P46379 1132 aa10.69□□□□□ -0.7
KDM1B-203ENST00000546309 CAMKK2Q96RR4 588 aa10.69□□□□□ -0.7
KDM1B-203ENST00000546309 TESK2Q96S53 571 aa10.69□□□□□ -0.7
KDM1B-203ENST00000546309 PRDM11Q9NQV5 511 aa10.69□□□□□ -0.7
KDM1B-203ENST00000546309 DISP2A7MBM2 1401 aa10.68□□□□□ -0.7
KDM1B-203ENST00000546309 EIF3AQ14152 1382 aaKnown RBP10.68□□□□□ -0.7
KDM1B-203ENST00000546309 SBNO2Q9Y2G9 1366 aa10.68□□□□□ -0.7
KDM1B-203ENST00000546309 RGPD1P0DJD0 1748 aa10.68□□□□□ -0.7
KDM1B-203ENST00000546309 PSDA5PKW4 1024 aaPredicted RBP10.68□□□□□ -0.7
KDM1B-203ENST00000546309 GCP02774 474 aa10.68□□□□□ -0.7
KDM1B-203ENST00000546309 MIER1Q8N108 512 aa10.68□□□□□ -0.7
KDM1B-203ENST00000546309 RREB1Q92766 1687 aa10.68□□□□□ -0.7
KDM1B-203ENST00000546309 NFAT5O94916 1531 aa10.68□□□□□ -0.7
KDM1B-203ENST00000546309 NUP188Q5SRE5 1749 aa10.67□□□□□ -0.7
KDM1B-203ENST00000546309 PARP4Q9UKK3 1724 aaKnown RBP10.67□□□□□ -0.7
KDM1B-203ENST00000546309 LRP5O75197 1615 aa10.67□□□□□ -0.7
KDM1B-203ENST00000546309 EZH2Q15910 746 aaKnown RBP10.67□□□□□ -0.7
KDM1B-203ENST00000546309 ABTB2Q8N961 1025 aa10.67□□□□□ -0.7
KDM1B-203ENST00000546309 STRN4Q9NRL3 753 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms