RNA–Protein interactions for RNA: ENST00000546202.5

PPP1CA-211, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 4

Gene PPP1CA, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-211ENST00000546202 TRPM3Q9HCF6 1732 aaPredicted RBP22.38■■□□□ 1.17
PPP1CA-211ENST00000546202 KIF20BQ96Q89 1820 aa22.38■■□□□ 1.17
PPP1CA-211ENST00000546202 BRD4O60885 1362 aaPredicted RBP22.38■■□□□ 1.17
PPP1CA-211ENST00000546202 FOXO3O43524 673 aa22.35■■□□□ 1.17
PPP1CA-211ENST00000546202 KNSTRNQ9Y448 316 aa22.35■■□□□ 1.17
PPP1CA-211ENST00000546202 ANKRD26Q9UPS8 1709 aa22.34■■□□□ 1.17
PPP1CA-211ENST00000546202 PXDNQ92626 1479 aa22.34■■□□□ 1.17
PPP1CA-211ENST00000546202 NPHP3Q7Z494 1330 aa22.33■■□□□ 1.17
PPP1CA-211ENST00000546202 AHDC1Q5TGY3 1603 aaPredicted RBP22.33■■□□□ 1.17
PPP1CA-211ENST00000546202 PSME1Q06323 249 aa22.33■■□□□ 1.17
PPP1CA-211ENST00000546202 NPC1L1Q9UHC9 1359 aa22.33■■□□□ 1.17
PPP1CA-211ENST00000546202 AMER1Q5JTC6 1135 aaPredicted RBP22.32■■□□□ 1.16
PPP1CA-211ENST00000546202 DIEXFQ68CQ4 756 aaKnown RBP22.32■■□□□ 1.16
PPP1CA-211ENST00000546202 TTC21BQ7Z4L5 1316 aa22.31■■□□□ 1.16
PPP1CA-211ENST00000546202 CGNL1Q0VF96 1302 aa22.31■■□□□ 1.16
PPP1CA-211ENST00000546202 TTC21AQ8NDW8 1320 aa22.31■■□□□ 1.16
PPP1CA-211ENST00000546202 PIK3C2AO00443 1686 aa22.3■■□□□ 1.16
PPP1CA-211ENST00000546202 USP54Q70EL1 1684 aa22.3■■□□□ 1.16
PPP1CA-211ENST00000546202 ALS2Q96Q42 1657 aa22.3■■□□□ 1.16
PPP1CA-211ENST00000546202 KRT28Q7Z3Y7 464 aa22.3■■□□□ 1.16
PPP1CA-211ENST00000546202 JCADQ9P266 1359 aa22.29■■□□□ 1.16
PPP1CA-211ENST00000546202 DDX17Q92841 729 aaKnown RBP22.29■■□□□ 1.16
PPP1CA-211ENST00000546202 SOS2Q07890 1332 aaPredicted RBP22.29■■□□□ 1.16
PPP1CA-211ENST00000546202 SBNO1A3KN83 1393 aa22.28■■□□□ 1.16
PPP1CA-211ENST00000546202 NSD2O96028 1365 aa22.28■■□□□ 1.16
PPP1CA-211ENST00000546202 MARF1Q9Y4F3 1742 aaKnown RBP22.28■■□□□ 1.16
PPP1CA-211ENST00000546202 FYB1O15117 783 aa22.27■■□□□ 1.16
PPP1CA-211ENST00000546202 XPCQ01831 940 aaPredicted RBP22.27■■□□□ 1.16
PPP1CA-211ENST00000546202 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.27■■□□□ 1.16
PPP1CA-211ENST00000546202 UPF1Q92900 1129 aaKnown RBP eCLIP22.27■■□□□ 1.16
PPP1CA-211ENST00000546202 PHLPP1O60346 1717 aa22.26■■□□□ 1.15
PPP1CA-211ENST00000546202 NME9Q86XW9 330 aa22.24■■□□□ 1.15
PPP1CA-211ENST00000546202 COL16A1Q07092 1604 aaPredicted RBP22.24■■□□□ 1.15
PPP1CA-211ENST00000546202 USP31Q70CQ4 1352 aa22.24■■□□□ 1.15
PPP1CA-211ENST00000546202 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
PPP1CA-211ENST00000546202 OVOS2A0A0J9YW53 1432 aa22.23■■□□□ 1.15
PPP1CA-211ENST00000546202 OVOS2Q6IE36 1432 aa22.23■■□□□ 1.15
PPP1CA-211ENST00000546202 PAK3O75914 559 aaPredicted RBP22.22■■□□□ 1.15
PPP1CA-211ENST00000546202 CC2D1BQ5T0F9 858 aaKnown RBP22.22■■□□□ 1.15
PPP1CA-211ENST00000546202 SPATA31A3Q5VYP0 1347 aa22.22■■□□□ 1.15
PPP1CA-211ENST00000546202 GGNBP2Q9H3C7 697 aa22.21■■□□□ 1.15
PPP1CA-211ENST00000546202 PARD3Q8TEW0 1356 aa22.21■■□□□ 1.15
PPP1CA-211ENST00000546202 LRP6O75581 1613 aa22.2■■□□□ 1.15
PPP1CA-211ENST00000546202 ABTB2Q8N961 1025 aa22.2■■□□□ 1.14
PPP1CA-211ENST00000546202 PRKRIP1Q9H875 184 aaPredicted RBP22.19■■□□□ 1.14
PPP1CA-211ENST00000546202 ZRANB1Q9UGI0 708 aa22.19■■□□□ 1.14
PPP1CA-211ENST00000546202 CRYBG1Q9Y4K1 1723 aa22.19■■□□□ 1.14
PPP1CA-211ENST00000546202 ARHGEF10O15013 1369 aa22.18■■□□□ 1.14
PPP1CA-211ENST00000546202 SPATA31A6Q5VVP1 1343 aa22.18■■□□□ 1.14
PPP1CA-211ENST00000546202 ANP32CO43423 234 aa22.18■■□□□ 1.14
PPP1CA-211ENST00000546202 MEX3CQ5U5Q3 659 aaKnown RBP22.18■■□□□ 1.14
PPP1CA-211ENST00000546202 ZNF772Q68DY9 489 aaPredicted RBP22.18■■□□□ 1.14
PPP1CA-211ENST00000546202 RALBP1Q15311 655 aa22.17■■□□□ 1.14
PPP1CA-211ENST00000546202 NLRP6P59044 892 aa22.16■■□□□ 1.14
PPP1CA-211ENST00000546202 MORC1Q86VD1 984 aa22.16■■□□□ 1.14
PPP1CA-211ENST00000546202 COG3Q96JB2 828 aa22.16■■□□□ 1.14
PPP1CA-211ENST00000546202 SLIT3O75094 1523 aa22.16■■□□□ 1.14
PPP1CA-211ENST00000546202 CNGB1Q14028 1251 aaPredicted RBP22.15■■□□□ 1.14
PPP1CA-211ENST00000546202 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
PPP1CA-211ENST00000546202 COL22A1Q8NFW1 1626 aaPredicted RBP22.15■■□□□ 1.14
PPP1CA-211ENST00000546202 PHRF1Q9P1Y6 1649 aaKnown RBP22.15■■□□□ 1.14
PPP1CA-211ENST00000546202 USP19O94966 1318 aa22.14■■□□□ 1.14
PPP1CA-211ENST00000546202 LRRC59Q96AG4 307 aaKnown RBP22.14■■□□□ 1.13
PPP1CA-211ENST00000546202 ABCA3Q99758 1704 aa22.14■■□□□ 1.13
PPP1CA-211ENST00000546202 NUTM2GQ5VZR2 741 aa22.13■■□□□ 1.13
PPP1CA-211ENST00000546202 MAP2P11137 1827 aaKnown RBP22.13■■□□□ 1.13
PPP1CA-211ENST00000546202 RXRBP28702 533 aa22.12■■□□□ 1.13
PPP1CA-211ENST00000546202 LMOD2Q6P5Q4 547 aa22.12■■□□□ 1.13
PPP1CA-211ENST00000546202 SHPRHQ149N8 1683 aa22.11■■□□□ 1.13
PPP1CA-211ENST00000546202 AATKQ6ZMQ8 1374 aa22.11■■□□□ 1.13
PPP1CA-211ENST00000546202 NFAT5O94916 1531 aa22.11■■□□□ 1.13
PPP1CA-211ENST00000546202 PNPLA6Q8IY17 1366 aa22.1■■□□□ 1.13
PPP1CA-211ENST00000546202 NUTM2BA6NNL0 878 aaPredicted RBP22.09■■□□□ 1.13
PPP1CA-211ENST00000546202 NUTM2EB1AL46 878 aaPredicted RBP22.09■■□□□ 1.13
PPP1CA-211ENST00000546202 NUTM2AQ8IVF1 878 aaPredicted RBP22.09■■□□□ 1.13
PPP1CA-211ENST00000546202 MYBBP1AQ9BQG0 1328 aaKnown RBP22.08■■□□□ 1.13
PPP1CA-211ENST00000546202 LTN1O94822 1766 aa22.07■■□□□ 1.12
PPP1CA-211ENST00000546202 PPP2R1AP30153 589 aa22.07■■□□□ 1.12
PPP1CA-211ENST00000546202 MIER1Q8N108 512 aa22.07■■□□□ 1.12
PPP1CA-211ENST00000546202 TNNT2P45379 298 aaPredicted RBP22.06■■□□□ 1.12
PPP1CA-211ENST00000546202 KCNH5Q8NCM2 988 aa22.06■■□□□ 1.12
PPP1CA-211ENST00000546202 SMG6Q86US8 1419 aaKnown RBP22.06■■□□□ 1.12
PPP1CA-211ENST00000546202 GCP02774 474 aa22.04■■□□□ 1.12
PPP1CA-211ENST00000546202 FBLN1P23142 703 aa22.03■■□□□ 1.12
PPP1CA-211ENST00000546202 CABLES1Q8TDN4 633 aa22.03■■□□□ 1.12
PPP1CA-211ENST00000546202 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
PPP1CA-211ENST00000546202 POLKQ9UBT6 870 aa22.02■■□□□ 1.12
PPP1CA-211ENST00000546202 AFF2P51816 1311 aa22.02■■□□□ 1.12
PPP1CA-211ENST00000546202 SOX12O15370 315 aa22■■□□□ 1.11
PPP1CA-211ENST00000546202 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
PPP1CA-211ENST00000546202 CDK12Q9NYV4 1490 aaPredicted RBP21.99■■□□□ 1.11
PPP1CA-211ENST00000546202 CCER2I3L3R5 266 aa21.99■■□□□ 1.11
PPP1CA-211ENST00000546202 MTHFSP49914 203 aa21.99■■□□□ 1.11
PPP1CA-211ENST00000546202 RRS1Q15050 365 aaKnown RBP21.99■■□□□ 1.11
PPP1CA-211ENST00000546202 MAP3K19Q56UN5 1328 aa21.99■■□□□ 1.11
PPP1CA-211ENST00000546202 COL18A1P39060 1754 aa21.99■■□□□ 1.11
PPP1CA-211ENST00000546202 CPDO75976 1380 aa21.99■■□□□ 1.11
PPP1CA-211ENST00000546202 PLEKHG5O94827 1062 aa21.98■■□□□ 1.11
PPP1CA-211ENST00000546202 ARHGEF25Q86VW2 580 aa21.98■■□□□ 1.11
PPP1CA-211ENST00000546202 EMILIN1Q9Y6C2 1016 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms