RNA–Protein interactions for RNA: ENST00000546152.1

PRPF19-207, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 5

Gene PRPF19, Length 814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-207ENST00000546152 RGS12O14924 1447 aa28.61■■■□□ 2.17
PRPF19-207ENST00000546152 PPIP5K1Q6PFW1 1433 aa28.61■■■□□ 2.17
PRPF19-207ENST00000546152 RALGAPBQ86X10 1494 aa28.61■■■□□ 2.17
PRPF19-207ENST00000546152 CARD11Q9BXL7 1154 aa28.59■■■□□ 2.17
PRPF19-207ENST00000546152 EVC2Q86UK5 1308 aa28.59■■■□□ 2.17
PRPF19-207ENST00000546152 UNC5CLQ8IV45 518 aa28.58■■■□□ 2.17
PRPF19-207ENST00000546152 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.57■■■□□ 2.16
PRPF19-207ENST00000546152 CRYBG1Q9Y4K1 1723 aa28.57■■■□□ 2.16
PRPF19-207ENST00000546152 FAM83GA6ND36 823 aa28.56■■■□□ 2.16
PRPF19-207ENST00000546152 PCGF6Q9BYE7 350 aa28.55■■■□□ 2.16
PRPF19-207ENST00000546152 CABP1Q9NZU7 370 aa28.55■■■□□ 2.16
PRPF19-207ENST00000546152 GJD4Q96KN9 370 aaPredicted RBP28.54■■■□□ 2.16
PRPF19-207ENST00000546152 PLCH1Q4KWH8 1693 aa28.53■■■□□ 2.16
PRPF19-207ENST00000546152 SBNO2Q9Y2G9 1366 aa28.52■■■□□ 2.16
PRPF19-207ENST00000546152 NWD2Q9ULI1 1742 aa28.51■■■□□ 2.15
PRPF19-207ENST00000546152 NUTM2GQ5VZR2 741 aa28.5■■■□□ 2.15
PRPF19-207ENST00000546152 UPF1Q92900 1129 aaKnown RBP eCLIP28.49■■■□□ 2.15
PRPF19-207ENST00000546152 GLI3P10071 1580 aa28.48■■■□□ 2.15
PRPF19-207ENST00000546152 USP6P35125 1406 aa28.47■■■□□ 2.15
PRPF19-207ENST00000546152 VPS72Q15906 364 aa28.47■■■□□ 2.15
PRPF19-207ENST00000546152 ABTB2Q8N961 1025 aa28.47■■■□□ 2.15
PRPF19-207ENST00000546152 BRD4O60885 1362 aaPredicted RBP28.47■■■□□ 2.15
PRPF19-207ENST00000546152 PHRF1Q9P1Y6 1649 aaKnown RBP28.47■■■□□ 2.15
PRPF19-207ENST00000546152 COL14A1Q05707 1796 aaKnown RBP28.46■■■□□ 2.15
PRPF19-207ENST00000546152 CLSPNQ9HAW4 1339 aa28.44■■■□□ 2.14
PRPF19-207ENST00000546152 BTG4Q9NY30 223 aa28.44■■■□□ 2.14
PRPF19-207ENST00000546152 ATAD2Q6PL18 1390 aa28.44■■■□□ 2.14
PRPF19-207ENST00000546152 SSH2Q76I76 1423 aa28.43■■■□□ 2.14
PRPF19-207ENST00000546152 NRAPQ86VF7 1730 aa28.43■■■□□ 2.14
PRPF19-207ENST00000546152 USP19O94966 1318 aa28.43■■■□□ 2.14
PRPF19-207ENST00000546152 KIAA0232Q92628 1395 aa28.42■■■□□ 2.14
PRPF19-207ENST00000546152 PRDM11Q9NQV5 511 aa28.42■■■□□ 2.14
PRPF19-207ENST00000546152 NLRP13Q86W25 1043 aa28.4■■■□□ 2.14
PRPF19-207ENST00000546152 ZC3H6P61129 1189 aaKnown RBP28.39■■■□□ 2.14
PRPF19-207ENST00000546152 ZNF692Q9BU19 519 aaPredicted RBP28.39■■■□□ 2.14
PRPF19-207ENST00000546152 NRKQ7Z2Y5 1582 aa28.38■■■□□ 2.13
PRPF19-207ENST00000546152 CPSF1Q10570 1443 aaKnown RBP28.38■■■□□ 2.13
PRPF19-207ENST00000546152 TIMELESSQ9UNS1 1208 aa28.38■■■□□ 2.13
PRPF19-207ENST00000546152 CCDC9Q9Y3X0 531 aaKnown RBP28.38■■■□□ 2.13
PRPF19-207ENST00000546152 ST20-MTHFSA0A0A6YYL1 179 aa28.37■■■□□ 2.13
PRPF19-207ENST00000546152 CHRNA2Q15822 529 aa28.37■■■□□ 2.13
PRPF19-207ENST00000546152 TESK2Q96S53 571 aa28.37■■■□□ 2.13
PRPF19-207ENST00000546152 AKAP12Q02952 1782 aa28.37■■■□□ 2.13
PRPF19-207ENST00000546152 ONECUT3O60422 494 aaPredicted RBP28.36■■■□□ 2.13
PRPF19-207ENST00000546152 GCP02774 474 aa28.35■■■□□ 2.13
PRPF19-207ENST00000546152 TTC21BQ7Z4L5 1316 aa28.34■■■□□ 2.13
PRPF19-207ENST00000546152 CPDO75976 1380 aa28.34■■■□□ 2.13
PRPF19-207ENST00000546152 PIK3C2AO00443 1686 aa28.33■■■□□ 2.13
PRPF19-207ENST00000546152 NLRP6P59044 892 aa28.33■■■□□ 2.13
PRPF19-207ENST00000546152 SEPT12Q8IYM1 358 aa28.32■■■□□ 2.12
PRPF19-207ENST00000546152 PUS7Q96PZ0 661 aaKnown RBP28.32■■■□□ 2.12
PRPF19-207ENST00000546152 KTN1Q86UP2 1357 aaKnown RBP28.31■■■□□ 2.12
PRPF19-207ENST00000546152 CD163L1Q9NR16 1453 aa28.31■■■□□ 2.12
PRPF19-207ENST00000546152 SLIT3O75094 1523 aa28.3■■■□□ 2.12
PRPF19-207ENST00000546152 SPATA31A5Q5VU36 1347 aa28.3■■■□□ 2.12
PRPF19-207ENST00000546152 SPATA31A7Q8IWB4 1347 aa28.3■■■□□ 2.12
PRPF19-207ENST00000546152 TTC21AQ8NDW8 1320 aa28.29■■■□□ 2.12
PRPF19-207ENST00000546152 SLC12A5Q9H2X9 1139 aa28.29■■■□□ 2.12
PRPF19-207ENST00000546152 USP47Q96K76 1375 aa28.28■■■□□ 2.12
PRPF19-207ENST00000546152 BRWD3Q6RI45 1802 aa28.27■■■□□ 2.12
PRPF19-207ENST00000546152 MON2Q7Z3U7 1717 aa28.27■■■□□ 2.12
PRPF19-207ENST00000546152 LMO7Q8WWI1 1683 aa28.27■■■□□ 2.12
PRPF19-207ENST00000546152 CAMTA1Q9Y6Y1 1673 aa28.27■■■□□ 2.12
PRPF19-207ENST00000546152 FAM98CQ17RN3 349 aaKnown RBP28.27■■■□□ 2.12
PRPF19-207ENST00000546152 TMC1Q8TDI8 760 aa28.27■■■□□ 2.12
PRPF19-207ENST00000546152 EP400Q96L91 3159 aa28.27■■■□□ 2.12
PRPF19-207ENST00000546152 SLC24A1O60721 1099 aa28.25■■■□□ 2.11
PRPF19-207ENST00000546152 CCER1Q8TC90 406 aaPredicted RBP28.25■■■□□ 2.11
PRPF19-207ENST00000546152 STRN4Q9NRL3 753 aa28.25■■■□□ 2.11
PRPF19-207ENST00000546152 SPATA31A1Q5TZJ5 1347 aa28.23■■■□□ 2.11
PRPF19-207ENST00000546152 EVA1CP58658 441 aa28.21■■■□□ 2.11
PRPF19-207ENST00000546152 HDGFL2Q7Z4V5 671 aaPredicted RBP28.21■■■□□ 2.11
PRPF19-207ENST00000546152 KRT27Q7Z3Y8 459 aa28.2■■■□□ 2.1
PRPF19-207ENST00000546152 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.2■■■□□ 2.1
PRPF19-207ENST00000546152 TERF2IPQ9NYB0 399 aa28.2■■■□□ 2.1
PRPF19-207ENST00000546152 A0A1W2PP64 1363 aa28.2■■■□□ 2.1
PRPF19-207ENST00000546152 A0A0G2JS52 829 aa28.19■■■□□ 2.1
PRPF19-207ENST00000546152 MYT1Q01538 1121 aa28.19■■■□□ 2.1
PRPF19-207ENST00000546152 LARP1Q6PKG0 1096 aaKnown RBP28.19■■■□□ 2.1
PRPF19-207ENST00000546152 ZRANB1Q9UGI0 708 aa28.19■■■□□ 2.1
PRPF19-207ENST00000546152 AATKQ6ZMQ8 1374 aa28.19■■■□□ 2.1
PRPF19-207ENST00000546152 KCNH5Q8NCM2 988 aa28.18■■■□□ 2.1
PRPF19-207ENST00000546152 NINLQ9Y2I6 1382 aa28.18■■■□□ 2.1
PRPF19-207ENST00000546152 THSD7AQ9UPZ6 1657 aa28.18■■■□□ 2.1
PRPF19-207ENST00000546152 EDC4Q6P2E9 1401 aaKnown RBP28.18■■■□□ 2.1
PRPF19-207ENST00000546152 COL5A2P05997 1499 aaPredicted RBP28.17■■■□□ 2.1
PRPF19-207ENST00000546152 USP31Q70CQ4 1352 aa28.17■■■□□ 2.1
PRPF19-207ENST00000546152 ZBTB7CA1YPR0 619 aa28.17■■■□□ 2.1
PRPF19-207ENST00000546152 TMF1P82094 1093 aa28.16■■■□□ 2.1
PRPF19-207ENST00000546152 ARHGEF25Q86VW2 580 aa28.16■■■□□ 2.1
PRPF19-207ENST00000546152 NME9Q86XW9 330 aa28.16■■■□□ 2.1
PRPF19-207ENST00000546152 CCDC125Q86Z20 511 aa28.16■■■□□ 2.1
PRPF19-207ENST00000546152 COL18A1P39060 1754 aa28.15■■■□□ 2.1
PRPF19-207ENST00000546152 NFAT5O94916 1531 aa28.15■■■□□ 2.1
PRPF19-207ENST00000546152 USP54Q70EL1 1684 aa28.14■■■□□ 2.1
PRPF19-207ENST00000546152 USP35Q9P2H5 1018 aa28.14■■■□□ 2.1
PRPF19-207ENST00000546152 SOX12O15370 315 aa28.13■■■□□ 2.09
PRPF19-207ENST00000546152 AXIN2Q9Y2T1 843 aa28.13■■■□□ 2.09
PRPF19-207ENST00000546152 BARGINQ6ZT62 677 aa28.12■■■□□ 2.09
PRPF19-207ENST00000546152 BLMP54132 1417 aaPredicted RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms