RNA–Protein interactions for RNA: ENST00000546048.5

MDM2-234, Transcript of MDM2 proto-oncogene, human

TSL 5

Gene MDM2, Length 363 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDM2-234	ENST00000546048	SCAF11	Q99590	1463 aa	Known RBP	7.62	□□□□□ -1.19
MDM2-234	ENST00000546048	TET3	O43151	1660 aa		7.61	□□□□□ -1.19
MDM2-234	ENST00000546048	LHX6	Q9UPM6	363 aa		7.61	□□□□□ -1.19
MDM2-234	ENST00000546048	RIMS2	Q9UQ26	1411 aa		7.61	□□□□□ -1.19
MDM2-234	ENST00000546048	ZNF687	Q8N1G0	1237 aa		7.6	□□□□□ -1.19
MDM2-234	ENST00000546048	MPHOSPH9	Q99550	1183 aa		7.6	□□□□□ -1.19
MDM2-234	ENST00000546048	ADGRB3	O60242	1522 aa		7.6	□□□□□ -1.19
MDM2-234	ENST00000546048	EID1	Q9Y6B2	187 aa		7.59	□□□□□ -1.19
MDM2-234	ENST00000546048	SETD5	Q9C0A6	1442 aa		7.59	□□□□□ -1.19
MDM2-234	ENST00000546048	TMEM131L	A2VDJ0	1609 aa		7.59	□□□□□ -1.19
MDM2-234	ENST00000546048	RAB3GAP2	Q9H2M9	1393 aa		7.59	□□□□□ -1.2
MDM2-234	ENST00000546048	PDE4A	P27815	886 aa		7.58	□□□□□ -1.2
MDM2-234	ENST00000546048	MMRN1	Q13201	1228 aa		7.58	□□□□□ -1.2
MDM2-234	ENST00000546048	UPF1	Q92900	1129 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
MDM2-234	ENST00000546048	LARP6	Q9BRS8	491 aa	Known RBP	7.58	□□□□□ -1.2
MDM2-234	ENST00000546048	ADAMTS13	Q76LX8	1427 aa		7.58	□□□□□ -1.2
MDM2-234	ENST00000546048	STRCP1	A6NGW2	1772 aa		7.58	□□□□□ -1.2
MDM2-234	ENST00000546048	LRRC7	Q96NW7	1537 aa		7.57	□□□□□ -1.2
MDM2-234	ENST00000546048	ALK	Q9UM73	1620 aa		7.57	□□□□□ -1.2
MDM2-234	ENST00000546048	UBAP1L	F5GYI3	381 aa		7.57	□□□□□ -1.2
MDM2-234	ENST00000546048	MFSD10	Q14728	455 aa		7.57	□□□□□ -1.2
MDM2-234	ENST00000546048	OXER1	Q8TDS5	423 aa		7.57	□□□□□ -1.2
MDM2-234	ENST00000546048	DDX27	Q96GQ7	796 aa	Known RBP	7.57	□□□□□ -1.2
MDM2-234	ENST00000546048	PTPRU	Q92729	1446 aa		7.57	□□□□□ -1.2
MDM2-234	ENST00000546048	PLEKHG1	Q9ULL1	1385 aa		7.57	□□□□□ -1.2
MDM2-234	ENST00000546048	GCC2	Q8IWJ2	1684 aa		7.57	□□□□□ -1.2
MDM2-234	ENST00000546048	KCNA6	P17658	529 aa		7.56	□□□□□ -1.2
MDM2-234	ENST00000546048	IQGAP1	P46940	1657 aa		7.56	□□□□□ -1.2
MDM2-234	ENST00000546048	CLTCL1	P53675	1640 aa		7.56	□□□□□ -1.2
MDM2-234	ENST00000546048	POLR1A	O95602	1720 aa	Predicted RBP	7.55	□□□□□ -1.2
MDM2-234	ENST00000546048	PPP1R15A	O75807	674 aa	Predicted RBP	7.55	□□□□□ -1.2
MDM2-234	ENST00000546048	PIP4K2B	P78356	416 aa		7.55	□□□□□ -1.2
MDM2-234	ENST00000546048	ZNF326	Q5BKZ1	582 aa	Known RBP	7.55	□□□□□ -1.2
MDM2-234	ENST00000546048	BCAN	Q96GW7	911 aa		7.55	□□□□□ -1.2
MDM2-234	ENST00000546048	TBX22	Q9Y458	520 aa		7.55	□□□□□ -1.2
MDM2-234	ENST00000546048	MET	P08581	1390 aa		7.55	□□□□□ -1.2
MDM2-234	ENST00000546048	ADGRF5	Q8IZF2	1346 aa		7.54	□□□□□ -1.2
MDM2-234	ENST00000546048	TRPM2	O94759	1503 aa		7.54	□□□□□ -1.2
MDM2-234	ENST00000546048	RGL3	Q3MIN7	710 aa		7.54	□□□□□ -1.2
MDM2-234	ENST00000546048	POTEE	Q6S8J3	1075 aa		7.54	□□□□□ -1.2
MDM2-234	ENST00000546048	TMEM94	Q12767	1356 aa		7.54	□□□□□ -1.2
MDM2-234	ENST00000546048	MYO5B	Q9ULV0	1848 aa		7.54	□□□□□ -1.2
MDM2-234	ENST00000546048	CPS1	P31327	1500 aa		7.53	□□□□□ -1.2
MDM2-234	ENST00000546048	TBC1D12	O60347	775 aa		7.53	□□□□□ -1.2
MDM2-234	ENST00000546048	HSPA1L	P34931	641 aa		7.53	□□□□□ -1.2
MDM2-234	ENST00000546048	PROSER2	Q86WR7	435 aa	Predicted RBP	7.53	□□□□□ -1.2
MDM2-234	ENST00000546048	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	7.53	□□□□□ -1.2
MDM2-234	ENST00000546048	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	7.53	□□□□□ -1.2
MDM2-234	ENST00000546048	IQSEC2	Q5JU85	1478 aa		7.53	□□□□□ -1.2
MDM2-234	ENST00000546048	SPATA31E1	Q6ZUB1	1445 aa		7.52	□□□□□ -1.2
MDM2-234	ENST00000546048	NEXMIF	Q5QGS0	1516 aa		7.52	□□□□□ -1.2
MDM2-234	ENST00000546048	KDM5A	P29375	1690 aa	Known RBP	7.52	□□□□□ -1.21
MDM2-234	ENST00000546048	ANKRD30B	Q9BXX2	1392 aa		7.52	□□□□□ -1.21
MDM2-234	ENST00000546048	SPRYD3	Q8NCJ5	442 aa		7.52	□□□□□ -1.21
MDM2-234	ENST00000546048	AMOTL2	Q9Y2J4	779 aa		7.52	□□□□□ -1.21
MDM2-234	ENST00000546048	AXIN2	Q9Y2T1	843 aa		7.52	□□□□□ -1.21
MDM2-234	ENST00000546048	HDGF	P51858	240 aa	Known RBP	7.51	□□□□□ -1.21
MDM2-234	ENST00000546048	EMILIN3	Q9NT22	766 aa		7.51	□□□□□ -1.21
MDM2-234	ENST00000546048	SPHKAP	Q2M3C7	1700 aa		7.51	□□□□□ -1.21
MDM2-234	ENST00000546048	NRXN3	Q9Y4C0	1643 aa		7.51	□□□□□ -1.21
MDM2-234	ENST00000546048	PSD	A5PKW4	1024 aa	Predicted RBP	7.5	□□□□□ -1.21
MDM2-234	ENST00000546048	HRC	P23327	699 aa		7.5	□□□□□ -1.21
MDM2-234	ENST00000546048	PBX2	P40425	430 aa		7.5	□□□□□ -1.21
MDM2-234	ENST00000546048	LSM11	P83369	360 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
MDM2-234	ENST00000546048	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	7.5	□□□□□ -1.21
MDM2-234	ENST00000546048	CFAP44	Q96MT7	982 aa		7.5	□□□□□ -1.21
MDM2-234	ENST00000546048	TOM1	O60784	492 aa		7.49	□□□□□ -1.21
MDM2-234	ENST00000546048	TMEM132E	Q6IEE7	984 aa		7.49	□□□□□ -1.21
MDM2-234	ENST00000546048	ANKRD13D	Q6ZTN6	518 aa		7.49	□□□□□ -1.21
MDM2-234	ENST00000546048	ROBO2	Q9HCK4	1378 aa		7.48	□□□□□ -1.21
MDM2-234	ENST00000546048	XIRP1	Q702N8	1843 aa	Known RBP	7.48	□□□□□ -1.21
MDM2-234	ENST00000546048	CCDC144A	A2RUR9	1427 aa		7.48	□□□□□ -1.21
MDM2-234	ENST00000546048	NWD1	Q149M9	1564 aa		7.48	□□□□□ -1.21
MDM2-234	ENST00000546048	PPP4R3B	Q5MIZ7	849 aa		7.48	□□□□□ -1.21
MDM2-234	ENST00000546048	SETBP1	Q9Y6X0	1596 aa		7.48	□□□□□ -1.21
MDM2-234	ENST00000546048	RPGRIP1L	Q68CZ1	1315 aa		7.48	□□□□□ -1.21
MDM2-234	ENST00000546048	DHX57	Q6P158	1386 aa	Known RBP	7.47	□□□□□ -1.21
MDM2-234	ENST00000546048	EVI5	O60447	810 aa		7.47	□□□□□ -1.21
MDM2-234	ENST00000546048	CFAP70	Q5T0N1	1121 aa		7.47	□□□□□ -1.21
MDM2-234	ENST00000546048	PIK3R4	Q99570	1358 aa		7.46	□□□□□ -1.21
MDM2-234	ENST00000546048	PLEKHH1	Q9ULM0	1364 aa		7.46	□□□□□ -1.21
MDM2-234	ENST00000546048	PSEN2	P49810	448 aa		7.46	□□□□□ -1.22
MDM2-234	ENST00000546048	WAPL	Q7Z5K2	1190 aa		7.46	□□□□□ -1.22
MDM2-234	ENST00000546048	ZNF454	Q8N9F8	522 aa		7.46	□□□□□ -1.22
MDM2-234	ENST00000546048	DDX17	Q92841	729 aa	Known RBP	7.46	□□□□□ -1.22
MDM2-234	ENST00000546048	SIN3A	Q96ST3	1273 aa		7.46	□□□□□ -1.22
MDM2-234	ENST00000546048	SLAIN2	Q9P270	581 aa		7.46	□□□□□ -1.22
MDM2-234	ENST00000546048	STK26	Q9P289	416 aa		7.46	□□□□□ -1.22
MDM2-234	ENST00000546048	NKTR	P30414	1462 aa	Known RBP	7.46	□□□□□ -1.22
MDM2-234	ENST00000546048	ARHGAP33	O14559	1287 aa		7.45	□□□□□ -1.22
MDM2-234	ENST00000546048	CAMK2B	Q13554	666 aa		7.45	□□□□□ -1.22
MDM2-234	ENST00000546048	DMRTA1	Q5VZB9	504 aa		7.45	□□□□□ -1.22
MDM2-234	ENST00000546048	ILDR2	Q71H61	639 aa		7.45	□□□□□ -1.22
MDM2-234	ENST00000546048	C19orf44	Q9H6X5	657 aa		7.45	□□□□□ -1.22
MDM2-234	ENST00000546048	C14orf93	Q9H972	538 aa	Known RBP	7.45	□□□□□ -1.22
MDM2-234	ENST00000546048	KDM2A	Q9Y2K7	1162 aa		7.45	□□□□□ -1.22
MDM2-234	ENST00000546048	ASXL1	Q8IXJ9	1541 aa		7.45	□□□□□ -1.22
MDM2-234	ENST00000546048	PIK3C2G	O75747	1445 aa		7.44	□□□□□ -1.22
MDM2-234	ENST00000546048	FAM135B	Q49AJ0	1406 aa		7.44	□□□□□ -1.22
MDM2-234	ENST00000546048	CHD2	O14647	1828 aa	Known RBP	7.44	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms