RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.33
CADM1-220ENST00000546000 TTC21BQ7Z4L5 1316 aa23.32■■□□□ 1.32
CADM1-220ENST00000546000 PIK3C2AO00443 1686 aa23.32■■□□□ 1.32
CADM1-220ENST00000546000 PXDNQ92626 1479 aa23.31■■□□□ 1.32
CADM1-220ENST00000546000 NHSL1Q5SYE7 1610 aa23.31■■□□□ 1.32
CADM1-220ENST00000546000 NME9Q86XW9 330 aa23.31■■□□□ 1.32
CADM1-220ENST00000546000 ZRANB1Q9UGI0 708 aa23.31■■□□□ 1.32
CADM1-220ENST00000546000 ZNF692Q9BU19 519 aaPredicted RBP23.29■■□□□ 1.32
CADM1-220ENST00000546000 PIP4K2BP78356 416 aa23.28■■□□□ 1.32
CADM1-220ENST00000546000 PSME1Q06323 249 aa23.28■■□□□ 1.32
CADM1-220ENST00000546000 GGNBP2Q9H3C7 697 aa23.28■■□□□ 1.32
CADM1-220ENST00000546000 CGNL1Q0VF96 1302 aa23.28■■□□□ 1.32
CADM1-220ENST00000546000 ANKRD26Q9UPS8 1709 aa23.28■■□□□ 1.32
CADM1-220ENST00000546000 KRT28Q7Z3Y7 464 aa23.27■■□□□ 1.32
CADM1-220ENST00000546000 MARF1Q9Y4F3 1742 aaKnown RBP23.26■■□□□ 1.31
CADM1-220ENST00000546000 PAK3O75914 559 aaPredicted RBP23.26■■□□□ 1.31
CADM1-220ENST00000546000 NPHP3Q7Z494 1330 aa23.26■■□□□ 1.31
CADM1-220ENST00000546000 SCAF1Q9H7N4 1312 aaKnown RBP23.26■■□□□ 1.31
CADM1-220ENST00000546000 FYB1O15117 783 aa23.25■■□□□ 1.31
CADM1-220ENST00000546000 MIER1Q8N108 512 aa23.25■■□□□ 1.31
CADM1-220ENST00000546000 NPC1L1Q9UHC9 1359 aa23.25■■□□□ 1.31
CADM1-220ENST00000546000 AHDC1Q5TGY3 1603 aaPredicted RBP23.24■■□□□ 1.31
CADM1-220ENST00000546000 ANP32CO43423 234 aa23.24■■□□□ 1.31
CADM1-220ENST00000546000 TOM1O60784 492 aa23.24■■□□□ 1.31
CADM1-220ENST00000546000 NUTM2GQ5VZR2 741 aa23.24■■□□□ 1.31
CADM1-220ENST00000546000 ALS2Q96Q42 1657 aa23.24■■□□□ 1.31
CADM1-220ENST00000546000 PARD3Q8TEW0 1356 aa23.24■■□□□ 1.31
CADM1-220ENST00000546000 PRKRIP1Q9H875 184 aaPredicted RBP23.23■■□□□ 1.31
CADM1-220ENST00000546000 OVOS2A0A0J9YW53 1432 aa23.23■■□□□ 1.31
CADM1-220ENST00000546000 OVOS2Q6IE36 1432 aa23.23■■□□□ 1.31
CADM1-220ENST00000546000 TTC21AQ8NDW8 1320 aa23.22■■□□□ 1.31
CADM1-220ENST00000546000 NSD2O96028 1365 aa23.22■■□□□ 1.31
CADM1-220ENST00000546000 TNS3Q68CZ2 1445 aa23.2■■□□□ 1.3
CADM1-220ENST00000546000 PLEKHG5O94827 1062 aa23.2■■□□□ 1.3
CADM1-220ENST00000546000 USP54Q70EL1 1684 aa23.19■■□□□ 1.3
CADM1-220ENST00000546000 SOS2Q07890 1332 aaPredicted RBP23.19■■□□□ 1.3
CADM1-220ENST00000546000 TNNT2P45379 298 aaPredicted RBP23.19■■□□□ 1.3
CADM1-220ENST00000546000 PHLPP1O60346 1717 aa23.19■■□□□ 1.3
CADM1-220ENST00000546000 SBNO1A3KN83 1393 aa23.18■■□□□ 1.3
CADM1-220ENST00000546000 BRD4O60885 1362 aaPredicted RBP23.18■■□□□ 1.3
CADM1-220ENST00000546000 LMOD2Q6P5Q4 547 aa23.18■■□□□ 1.3
CADM1-220ENST00000546000 MORC1Q86VD1 984 aa23.18■■□□□ 1.3
CADM1-220ENST00000546000 COL16A1Q07092 1604 aaPredicted RBP23.18■■□□□ 1.3
CADM1-220ENST00000546000 ABTB2Q8N961 1025 aa23.17■■□□□ 1.3
CADM1-220ENST00000546000 USP31Q70CQ4 1352 aa23.16■■□□□ 1.3
CADM1-220ENST00000546000 FBLN1P23142 703 aa23.16■■□□□ 1.3
CADM1-220ENST00000546000 SPATA31A3Q5VYP0 1347 aa23.15■■□□□ 1.3
CADM1-220ENST00000546000 SOX12O15370 315 aa23.15■■□□□ 1.3
CADM1-220ENST00000546000 COG3Q96JB2 828 aa23.15■■□□□ 1.3
CADM1-220ENST00000546000 MED1Q15648 1581 aaPredicted RBP23.14■■□□□ 1.3
CADM1-220ENST00000546000 NLRP6P59044 892 aa23.14■■□□□ 1.29
CADM1-220ENST00000546000 CRYBG1Q9Y4K1 1723 aa23.13■■□□□ 1.29
CADM1-220ENST00000546000 PHRF1Q9P1Y6 1649 aaKnown RBP23.12■■□□□ 1.29
CADM1-220ENST00000546000 RALBP1Q15311 655 aa23.12■■□□□ 1.29
CADM1-220ENST00000546000 PPP2R1AP30153 589 aa23.11■■□□□ 1.29
CADM1-220ENST00000546000 CCDC184Q52MB2 194 aa23.11■■□□□ 1.29
CADM1-220ENST00000546000 SLIT3O75094 1523 aa23.11■■□□□ 1.29
CADM1-220ENST00000546000 MYBBP1AQ9BQG0 1328 aaKnown RBP23.1■■□□□ 1.29
CADM1-220ENST00000546000 ABCA3Q99758 1704 aa23.1■■□□□ 1.29
CADM1-220ENST00000546000 USP19O94966 1318 aa23.09■■□□□ 1.29
CADM1-220ENST00000546000 NFAT5O94916 1531 aa23.09■■□□□ 1.29
CADM1-220ENST00000546000 HSPA1LP34931 641 aa23.09■■□□□ 1.29
CADM1-220ENST00000546000 CABLES1Q8TDN4 633 aa23.08■■□□□ 1.29
CADM1-220ENST00000546000 ARHGEF10O15013 1369 aa23.08■■□□□ 1.29
CADM1-220ENST00000546000 PEAK1Q9H792 1746 aa23.06■■□□□ 1.28
CADM1-220ENST00000546000 RRS1Q15050 365 aaKnown RBP23.06■■□□□ 1.28
CADM1-220ENST00000546000 PNPLA6Q8IY17 1366 aa23.05■■□□□ 1.28
CADM1-220ENST00000546000 NLRP13Q86W25 1043 aa23.05■■□□□ 1.28
CADM1-220ENST00000546000 EMILIN1Q9Y6C2 1016 aa23.04■■□□□ 1.28
CADM1-220ENST00000546000 COL22A1Q8NFW1 1626 aaPredicted RBP23.03■■□□□ 1.28
CADM1-220ENST00000546000 AATKQ6ZMQ8 1374 aa23.02■■□□□ 1.28
CADM1-220ENST00000546000 SMG6Q86US8 1419 aaKnown RBP23.02■■□□□ 1.28
CADM1-220ENST00000546000 MAP2P11137 1827 aaKnown RBP23.02■■□□□ 1.28
CADM1-220ENST00000546000 LTN1O94822 1766 aa23.01■■□□□ 1.27
CADM1-220ENST00000546000 MTHFSP49914 203 aa23.01■■□□□ 1.27
CADM1-220ENST00000546000 POLKQ9UBT6 870 aa23.01■■□□□ 1.27
CADM1-220ENST00000546000 ZBTB7CA1YPR0 619 aa23■■□□□ 1.27
CADM1-220ENST00000546000 LRRC59Q96AG4 307 aaKnown RBP23■■□□□ 1.27
CADM1-220ENST00000546000 MAP3K19Q56UN5 1328 aa23■■□□□ 1.27
CADM1-220ENST00000546000 COL3A1P02461 1466 aaPredicted RBP22.99■■□□□ 1.27
CADM1-220ENST00000546000 PPM1GO15355 546 aaPredicted RBP22.99■■□□□ 1.27
CADM1-220ENST00000546000 GCP02774 474 aa22.99■■□□□ 1.27
CADM1-220ENST00000546000 MRS2Q9HD23 443 aa22.99■■□□□ 1.27
CADM1-220ENST00000546000 SHPRHQ149N8 1683 aa22.98■■□□□ 1.27
CADM1-220ENST00000546000 CCER2I3L3R5 266 aa22.97■■□□□ 1.27
CADM1-220ENST00000546000 CDK12Q9NYV4 1490 aaPredicted RBP22.97■■□□□ 1.27
CADM1-220ENST00000546000 ZC3H6P61129 1189 aaKnown RBP22.96■■□□□ 1.27
CADM1-220ENST00000546000 KCNH5Q8NCM2 988 aa22.94■■□□□ 1.26
CADM1-220ENST00000546000 KIAA0232Q92628 1395 aa22.93■■□□□ 1.26
CADM1-220ENST00000546000 HAP1P54257 671 aaPredicted RBP22.92■■□□□ 1.26
CADM1-220ENST00000546000 ARHGEF25Q86VW2 580 aa22.92■■□□□ 1.26
CADM1-220ENST00000546000 JCADQ9P266 1359 aa22.91■■□□□ 1.26
CADM1-220ENST00000546000 CHRNA2Q15822 529 aa22.91■■□□□ 1.26
CADM1-220ENST00000546000 FLT4P35916 1363 aa22.9■■□□□ 1.26
CADM1-220ENST00000546000 AMPHP49418 695 aa22.9■■□□□ 1.26
CADM1-220ENST00000546000 HSP90AB2PQ58FF8 381 aa22.9■■□□□ 1.26
CADM1-220ENST00000546000 COL18A1P39060 1754 aa22.9■■□□□ 1.26
CADM1-220ENST00000546000 NUTM2BA6NNL0 878 aaPredicted RBP22.89■■□□□ 1.25
CADM1-220ENST00000546000 NUTM2EB1AL46 878 aaPredicted RBP22.89■■□□□ 1.25
CADM1-220ENST00000546000 HOXC9P31274 260 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms