RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 KNDC1Q76NI1 1749 aa7.47□□□□□ -1.21
NPIPB3-214ENST00000545358 OTUD5Q96G74 571 aa7.47□□□□□ -1.21
NPIPB3-214ENST00000545358 NRXN3Q9Y4C0 1643 aa7.47□□□□□ -1.21
NPIPB3-214ENST00000545358 G3V3G9 751 aa7.46□□□□□ -1.22
NPIPB3-214ENST00000545358 RALBP1Q15311 655 aa7.46□□□□□ -1.22
NPIPB3-214ENST00000545358 HS6ST3Q8IZP7 471 aa7.46□□□□□ -1.22
NPIPB3-214ENST00000545358 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.46□□□□□ -1.22
NPIPB3-214ENST00000545358 PTPRMP28827 1452 aa7.46□□□□□ -1.22
NPIPB3-214ENST00000545358 PARD3Q8TEW0 1356 aa7.46□□□□□ -1.22
NPIPB3-214ENST00000545358 USP32Q8NFA0 1604 aa7.45□□□□□ -1.22
NPIPB3-214ENST00000545358 YTHDC2Q9H6S0 1430 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-214ENST00000545358 POTEJP0CG39 1038 aa7.45□□□□□ -1.22
NPIPB3-214ENST00000545358 NLRP6P59044 892 aa7.45□□□□□ -1.22
NPIPB3-214ENST00000545358 TULP4Q9NRJ4 1543 aa7.45□□□□□ -1.22
NPIPB3-214ENST00000545358 MYBBP1AQ9BQG0 1328 aaKnown RBP7.45□□□□□ -1.22
NPIPB3-214ENST00000545358 BRD4O60885 1362 aaPredicted RBP7.45□□□□□ -1.22
NPIPB3-214ENST00000545358 NPC1L1Q9UHC9 1359 aa7.45□□□□□ -1.22
NPIPB3-214ENST00000545358 SLIT1O75093 1534 aa7.44□□□□□ -1.22
NPIPB3-214ENST00000545358 CPS1P31327 1500 aa7.44□□□□□ -1.22
NPIPB3-214ENST00000545358 PUS7Q96PZ0 661 aaKnown RBP7.44□□□□□ -1.22
NPIPB3-214ENST00000545358 DIP2AQ14689 1571 aa7.44□□□□□ -1.22
NPIPB3-214ENST00000545358 ZNF142P52746 1687 aaPredicted RBP7.44□□□□□ -1.22
NPIPB3-214ENST00000545358 ADAMTSL3P82987 1691 aa7.44□□□□□ -1.22
NPIPB3-214ENST00000545358 RIMS1Q86UR5 1692 aaKnown RBP7.44□□□□□ -1.22
NPIPB3-214ENST00000545358 TMEM2Q9UHN6 1383 aa7.44□□□□□ -1.22
NPIPB3-214ENST00000545358 NINLQ9Y2I6 1382 aa7.44□□□□□ -1.22
NPIPB3-214ENST00000545358 ARHGAP23Q9P227 1491 aa7.43□□□□□ -1.22
NPIPB3-214ENST00000545358 PER1O15534 1290 aaPredicted RBP7.43□□□□□ -1.22
NPIPB3-214ENST00000545358 HDGFP51858 240 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-214ENST00000545358 MRS2Q9HD23 443 aa7.43□□□□□ -1.22
NPIPB3-214ENST00000545358 LRPPRCP42704 1394 aaKnown RBP7.43□□□□□ -1.22
NPIPB3-214ENST00000545358 TECPR2O15040 1411 aa7.43□□□□□ -1.22
NPIPB3-214ENST00000545358 CEP170BQ9Y4F5 1589 aaPredicted RBP7.42□□□□□ -1.22
NPIPB3-214ENST00000545358 C3orf67Q6ZVT6 689 aa7.42□□□□□ -1.22
NPIPB3-214ENST00000545358 PANK3Q9H999 370 aa7.42□□□□□ -1.22
NPIPB3-214ENST00000545358 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.42□□□□□ -1.22
NPIPB3-214ENST00000545358 TRAK1Q9UPV9 953 aa7.42□□□□□ -1.22
NPIPB3-214ENST00000545358 EVC2Q86UK5 1308 aa7.42□□□□□ -1.22
NPIPB3-214ENST00000545358 PLEKHG1Q9ULL1 1385 aa7.42□□□□□ -1.22
NPIPB3-214ENST00000545358 NUTM2DQ5VT03 806 aaPredicted RBP7.41□□□□□ -1.22
NPIPB3-214ENST00000545358 TMEM132EQ6IEE7 984 aa7.41□□□□□ -1.22
NPIPB3-214ENST00000545358 NLRP13Q86W25 1043 aa7.41□□□□□ -1.22
NPIPB3-214ENST00000545358 RYDENQ9NUL5 291 aaKnown RBP7.41□□□□□ -1.22
NPIPB3-214ENST00000545358 BOLA1Q9Y3E2 137 aa7.41□□□□□ -1.22
NPIPB3-214ENST00000545358 INSRP06213 1382 aa7.41□□□□□ -1.22
NPIPB3-214ENST00000545358 ATAD2Q6PL18 1390 aa7.41□□□□□ -1.22
NPIPB3-214ENST00000545358 ABCC11Q96J66 1382 aa7.41□□□□□ -1.22
NPIPB3-214ENST00000545358 FAM135BQ49AJ0 1406 aa7.41□□□□□ -1.22
NPIPB3-214ENST00000545358 KNSTRNQ9Y448 316 aa7.4□□□□□ -1.22
NPIPB3-214ENST00000545358 ADGRB2O60241 1585 aa7.4□□□□□ -1.22
NPIPB3-214ENST00000545358 MED14O60244 1454 aa7.39□□□□□ -1.23
NPIPB3-214ENST00000545358 ADAMTS13Q76LX8 1427 aa7.39□□□□□ -1.23
NPIPB3-214ENST00000545358 ANKRD36BQ8N2N9 1353 aa7.39□□□□□ -1.23
NPIPB3-214ENST00000545358 PHF8Q9UPP1 1060 aa7.39□□□□□ -1.23
NPIPB3-214ENST00000545358 NSD3Q9BZ95 1437 aa7.38□□□□□ -1.23
NPIPB3-214ENST00000545358 NSD2O96028 1365 aa7.38□□□□□ -1.23
NPIPB3-214ENST00000545358 ZBED9Q6R2W3 1325 aa7.38□□□□□ -1.23
NPIPB3-214ENST00000545358 CCDC184Q52MB2 194 aa7.38□□□□□ -1.23
NPIPB3-214ENST00000545358 SLAIN1Q8ND83 568 aa7.38□□□□□ -1.23
NPIPB3-214ENST00000545358 FBXO22Q8NEZ5 403 aa7.38□□□□□ -1.23
NPIPB3-214ENST00000545358 MFRPQ9BY79 579 aa7.38□□□□□ -1.23
NPIPB3-214ENST00000545358 ATP7BP35670 1465 aa7.37□□□□□ -1.23
NPIPB3-214ENST00000545358 PTCH1Q13635 1447 aa7.37□□□□□ -1.23
NPIPB3-214ENST00000545358 HNRNPUQ00839 825 aaKnown RBP eCLIP7.37□□□□□ -1.23
NPIPB3-214ENST00000545358 TMC1Q8TDI8 760 aa7.37□□□□□ -1.23
NPIPB3-214ENST00000545358 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
NPIPB3-214ENST00000545358 PRAM1Q96QH2 718 aa7.37□□□□□ -1.23
NPIPB3-214ENST00000545358 TMEM121BQ9BXQ6 578 aaPredicted RBP7.37□□□□□ -1.23
NPIPB3-214ENST00000545358 EID1Q9Y6B2 187 aa7.37□□□□□ -1.23
NPIPB3-214ENST00000545358 XRN1Q8IZH2 1706 aaKnown RBP7.37□□□□□ -1.23
NPIPB3-214ENST00000545358 ANKRD26Q9UPS8 1709 aa7.37□□□□□ -1.23
NPIPB3-214ENST00000545358 METP08581 1390 aa7.36□□□□□ -1.23
NPIPB3-214ENST00000545358 CEBPAP49715 358 aaPredicted RBP7.36□□□□□ -1.23
NPIPB3-214ENST00000545358 CC2D1BQ5T0F9 858 aaKnown RBP7.36□□□□□ -1.23
NPIPB3-214ENST00000545358 DPY19L2Q6NUT2 758 aa7.36□□□□□ -1.23
NPIPB3-214ENST00000545358 FAM9BQ8IZU0 186 aa7.36□□□□□ -1.23
NPIPB3-214ENST00000545358 MS4A4AQ96JQ5 239 aa7.36□□□□□ -1.23
NPIPB3-214ENST00000545358 POGKQ9P215 609 aa7.36□□□□□ -1.23
NPIPB3-214ENST00000545358 BLMP54132 1417 aaPredicted RBP7.35□□□□□ -1.23
NPIPB3-214ENST00000545358 SNPHO15079 494 aa7.35□□□□□ -1.23
NPIPB3-214ENST00000545358 THEMISQ8N1K5 641 aaPredicted RBP7.35□□□□□ -1.23
NPIPB3-214ENST00000545358 PNISRQ8TF01 805 aaKnown RBP7.35□□□□□ -1.23
NPIPB3-214ENST00000545358 RTN4Q9NQC3 1192 aaKnown RBP7.35□□□□□ -1.23
NPIPB3-214ENST00000545358 STK26Q9P289 416 aa7.35□□□□□ -1.23
NPIPB3-214ENST00000545358 GTF3C3Q9Y5Q9 886 aa7.35□□□□□ -1.23
NPIPB3-214ENST00000545358 KIF20BQ96Q89 1820 aa7.35□□□□□ -1.23
NPIPB3-214ENST00000545358 TOPAZ1Q8N9V7 1692 aa7.35□□□□□ -1.23
NPIPB3-214ENST00000545358 A0A1W2PP64 1363 aa7.34□□□□□ -1.23
NPIPB3-214ENST00000545358 PIK3R4Q99570 1358 aa7.34□□□□□ -1.23
NPIPB3-214ENST00000545358 CDC42BPGQ6DT37 1551 aa7.34□□□□□ -1.23
NPIPB3-214ENST00000545358 CGNL1Q0VF96 1302 aa7.34□□□□□ -1.23
NPIPB3-214ENST00000545358 MINK1Q8N4C8 1332 aaPredicted RBP7.34□□□□□ -1.23
NPIPB3-214ENST00000545358 MICALL2Q8IY33 904 aa7.34□□□□□ -1.23
NPIPB3-214ENST00000545358 CD163L1Q9NR16 1453 aa7.34□□□□□ -1.23
NPIPB3-214ENST00000545358 PLEKHH1Q9ULM0 1364 aa7.33□□□□□ -1.24
NPIPB3-214ENST00000545358 SETD1BQ9UPS6 1966 aaKnown RBP7.33□□□□□ -1.24
NPIPB3-214ENST00000545358 LTKP29376 864 aa7.33□□□□□ -1.24
NPIPB3-214ENST00000545358 PPP2R1AP30153 589 aa7.33□□□□□ -1.24
NPIPB3-214ENST00000545358 SRPK2P78362 688 aaKnown RBP7.33□□□□□ -1.24
NPIPB3-214ENST00000545358 CNGB1Q14028 1251 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms