RNA–Protein interactions for RNA: ENST00000545115.5

DDX11-228, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-228ENST00000545115 PAK3O75914 559 aaPredicted RBP20.53■□□□□ 0.88
DDX11-228ENST00000545115 NUDT16Q96DE0 195 aaKnown RBP20.53■□□□□ 0.88
DDX11-228ENST00000545115 BTG4Q9NY30 223 aa20.53■□□□□ 0.88
DDX11-228ENST00000545115 COL14A1Q05707 1796 aaKnown RBP20.53■□□□□ 0.88
DDX11-228ENST00000545115 CRYBG1Q9Y4K1 1723 aa20.51■□□□□ 0.87
DDX11-228ENST00000545115 KRT27Q7Z3Y8 459 aa20.5■□□□□ 0.87
DDX11-228ENST00000545115 CDK19Q9BWU1 502 aa20.5■□□□□ 0.87
DDX11-228ENST00000545115 A0A0G2JS52 829 aa20.49■□□□□ 0.87
DDX11-228ENST00000545115 MYT1Q01538 1121 aa20.49■□□□□ 0.87
DDX11-228ENST00000545115 TOPAZ1Q8N9V7 1692 aa20.48■□□□□ 0.87
DDX11-228ENST00000545115 SF3B2Q13435 895 aaKnown RBP20.48■□□□□ 0.87
DDX11-228ENST00000545115 POLR3AO14802 1390 aaPredicted RBP20.47■□□□□ 0.87
DDX11-228ENST00000545115 FAM98CQ17RN3 349 aaKnown RBP20.47■□□□□ 0.87
DDX11-228ENST00000545115 PRDM11Q9NQV5 511 aa20.47■□□□□ 0.87
DDX11-228ENST00000545115 NBPF1Q3BBV0 1214 aa20.46■□□□□ 0.87
DDX11-228ENST00000545115 CCDC61Q9Y6R9 512 aa20.46■□□□□ 0.87
DDX11-228ENST00000545115 DEFB132Q7Z7B7 95 aa20.44■□□□□ 0.86
DDX11-228ENST00000545115 PHRF1Q9P1Y6 1649 aaKnown RBP20.44■□□□□ 0.86
DDX11-228ENST00000545115 ACEP12821 1306 aa20.44■□□□□ 0.86
DDX11-228ENST00000545115 SPATA31A5Q5VU36 1347 aa20.44■□□□□ 0.86
DDX11-228ENST00000545115 SPATA31A7Q8IWB4 1347 aa20.44■□□□□ 0.86
DDX11-228ENST00000545115 KIAA0232Q92628 1395 aa20.44■□□□□ 0.86
DDX11-228ENST00000545115 PLEKHG3A1L390 1219 aa20.43■□□□□ 0.86
DDX11-228ENST00000545115 NBPF8Q3BBV2 869 aa20.42■□□□□ 0.86
DDX11-228ENST00000545115 SRCAPQ6ZRS2 3230 aa20.42■□□□□ 0.86
DDX11-228ENST00000545115 CENPJQ9HC77 1338 aaPredicted RBP20.41■□□□□ 0.86
DDX11-228ENST00000545115 NUTM2GQ5VZR2 741 aa20.4■□□□□ 0.86
DDX11-228ENST00000545115 THSD7AQ9UPZ6 1657 aa20.39■□□□□ 0.86
DDX11-228ENST00000545115 ZC3H6P61129 1189 aaKnown RBP20.39■□□□□ 0.85
DDX11-228ENST00000545115 SRPK2P78362 688 aaKnown RBP20.39■□□□□ 0.85
DDX11-228ENST00000545115 CHRNA2Q15822 529 aa20.39■□□□□ 0.85
DDX11-228ENST00000545115 PPIP5K1Q6PFW1 1433 aa20.38■□□□□ 0.85
DDX11-228ENST00000545115 BAG6P46379 1132 aa20.38■□□□□ 0.85
DDX11-228ENST00000545115 NRKQ7Z2Y5 1582 aa20.38■□□□□ 0.85
DDX11-228ENST00000545115 SPATA31A1Q5TZJ5 1347 aa20.37■□□□□ 0.85
DDX11-228ENST00000545115 ABTB2Q8N961 1025 aa20.37■□□□□ 0.85
DDX11-228ENST00000545115 STRN4Q9NRL3 753 aa20.36■□□□□ 0.85
DDX11-228ENST00000545115 QRICH2Q9H0J4 1663 aa20.35■□□□□ 0.85
DDX11-228ENST00000545115 USP19O94966 1318 aa20.35■□□□□ 0.85
DDX11-228ENST00000545115 L3MBTL2Q969R5 705 aa20.35■□□□□ 0.85
DDX11-228ENST00000545115 CABP2Q9NPB3 220 aa20.35■□□□□ 0.85
DDX11-228ENST00000545115 FAM182BQ5T319 152 aa20.34■□□□□ 0.85
DDX11-228ENST00000545115 BRD4O60885 1362 aaPredicted RBP20.34■□□□□ 0.85
DDX11-228ENST00000545115 CPDO75976 1380 aa20.34■□□□□ 0.85
DDX11-228ENST00000545115 RGPD1P0DJD0 1748 aa20.33■□□□□ 0.85
DDX11-228ENST00000545115 NLRP13Q86W25 1043 aa20.33■□□□□ 0.85
DDX11-228ENST00000545115 SSH2Q76I76 1423 aa20.33■□□□□ 0.84
DDX11-228ENST00000545115 EVA1CP58658 441 aa20.31■□□□□ 0.84
DDX11-228ENST00000545115 DISP2A7MBM2 1401 aa20.3■□□□□ 0.84
DDX11-228ENST00000545115 USP6P35125 1406 aa20.3■□□□□ 0.84
DDX11-228ENST00000545115 LMO7Q8WWI1 1683 aa20.3■□□□□ 0.84
DDX11-228ENST00000545115 CAMTA1Q9Y6Y1 1673 aa20.3■□□□□ 0.84
DDX11-228ENST00000545115 USP35Q9P2H5 1018 aa20.3■□□□□ 0.84
DDX11-228ENST00000545115 TRPM1Q7Z4N2 1603 aa20.3■□□□□ 0.84
DDX11-228ENST00000545115 GCP02774 474 aa20.29■□□□□ 0.84
DDX11-228ENST00000545115 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
DDX11-228ENST00000545115 SIN3AQ96ST3 1273 aa20.29■□□□□ 0.84
DDX11-228ENST00000545115 CABP1Q9NZU7 370 aa20.29■□□□□ 0.84
DDX11-228ENST00000545115 EVC2Q86UK5 1308 aa20.28■□□□□ 0.84
DDX11-228ENST00000545115 EN1Q05925 392 aaPredicted RBP20.28■□□□□ 0.84
DDX11-228ENST00000545115 ROCK2O75116 1388 aaKnown RBP20.28■□□□□ 0.84
DDX11-228ENST00000545115 LARP1Q6PKG0 1096 aaKnown RBP20.27■□□□□ 0.84
DDX11-228ENST00000545115 FAM196AQ6ZSG2 479 aa20.27■□□□□ 0.84
DDX11-228ENST00000545115 TNS1Q9HBL0 1735 aaKnown RBP20.27■□□□□ 0.83
DDX11-228ENST00000545115 TCP11L2Q8N4U5 519 aa20.26■□□□□ 0.83
DDX11-228ENST00000545115 LRP5O75197 1615 aa20.25■□□□□ 0.83
DDX11-228ENST00000545115 NLRP6P59044 892 aa20.25■□□□□ 0.83
DDX11-228ENST00000545115 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
DDX11-228ENST00000545115 COL5A2P05997 1499 aaPredicted RBP20.24■□□□□ 0.83
DDX11-228ENST00000545115 SLIT3O75094 1523 aa20.24■□□□□ 0.83
DDX11-228ENST00000545115 PSDA5PKW4 1024 aaPredicted RBP20.24■□□□□ 0.83
DDX11-228ENST00000545115 PDE3BQ13370 1112 aa20.24■□□□□ 0.83
DDX11-228ENST00000545115 THRAP3Q9Y2W1 955 aaKnown RBP20.24■□□□□ 0.83
DDX11-228ENST00000545115 TRIM37O94972 964 aa20.23■□□□□ 0.83
DDX11-228ENST00000545115 CRB1P82279 1406 aa20.21■□□□□ 0.83
DDX11-228ENST00000545115 EZH2Q15910 746 aaKnown RBP20.21■□□□□ 0.83
DDX11-228ENST00000545115 PIK3C2AO00443 1686 aa20.21■□□□□ 0.83
DDX11-228ENST00000545115 AATKQ6ZMQ8 1374 aa20.21■□□□□ 0.83
DDX11-228ENST00000545115 ZBTB7CA1YPR0 619 aa20.2■□□□□ 0.82
DDX11-228ENST00000545115 PARD3Q8TEW0 1356 aa20.2■□□□□ 0.82
DDX11-228ENST00000545115 CAMKK2Q96RR4 588 aa20.19■□□□□ 0.82
DDX11-228ENST00000545115 ZNF692Q9BU19 519 aaPredicted RBP20.19■□□□□ 0.82
DDX11-228ENST00000545115 APBA3O96018 575 aa20.18■□□□□ 0.82
DDX11-228ENST00000545115 PARP4Q9UKK3 1724 aaKnown RBP20.18■□□□□ 0.82
DDX11-228ENST00000545115 R3HDM1Q15032 1099 aaKnown RBP20.17■□□□□ 0.82
DDX11-228ENST00000545115 TTC21BQ7Z4L5 1316 aa20.17■□□□□ 0.82
DDX11-228ENST00000545115 TTC21AQ8NDW8 1320 aa20.16■□□□□ 0.82
DDX11-228ENST00000545115 AKAP12Q02952 1782 aa20.16■□□□□ 0.82
DDX11-228ENST00000545115 KCNH5Q8NCM2 988 aa20.15■□□□□ 0.82
DDX11-228ENST00000545115 SBNO2Q9Y2G9 1366 aa20.15■□□□□ 0.82
DDX11-228ENST00000545115 CPSF1Q10570 1443 aaKnown RBP20.15■□□□□ 0.82
DDX11-228ENST00000545115 C11orf95C9JLR9 678 aaPredicted RBP20.14■□□□□ 0.81
DDX11-228ENST00000545115 TOM1L2Q6ZVM7 507 aa20.14■□□□□ 0.81
DDX11-228ENST00000545115 COL18A1P39060 1754 aa20.13■□□□□ 0.81
DDX11-228ENST00000545115 OVOS2A0A0G2JMS6 1433 aa20.12■□□□□ 0.81
DDX11-228ENST00000545115 OVOS2A0A0J9YW53 1432 aa20.12■□□□□ 0.81
DDX11-228ENST00000545115 OVOS2Q6IE36 1432 aa20.12■□□□□ 0.81
DDX11-228ENST00000545115 KTN1Q86UP2 1357 aaKnown RBP20.12■□□□□ 0.81
DDX11-228ENST00000545115 WDR17Q8IZU2 1322 aa20.12■□□□□ 0.81
DDX11-228ENST00000545115 ARHGEF25Q86VW2 580 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms