RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, humanhuman

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-211ENST00000544336 ZRANB1Q9UGI0 708 aa39.98■■■■□ 3.99
PDCD2-211ENST00000544336 CRYBG1Q9Y4K1 1723 aa39.97■■■■□ 3.99
PDCD2-211ENST00000544336 A0A0G2JS52 829 aa39.95■■■■□ 3.99
PDCD2-211ENST00000544336 BLMP54132 1417 aaPredicted RBP39.95■■■■□ 3.99
PDCD2-211ENST00000544336 MYT1Q01538 1121 aa39.95■■■■□ 3.99
PDCD2-211ENST00000544336 KIAA1210Q9ULL0 1709 aa39.95■■■■□ 3.99
PDCD2-211ENST00000544336 CDK19Q9BWU1 502 aa39.93■■■■□ 3.98
PDCD2-211ENST00000544336 ONECUT3O60422 494 aaPredicted RBP39.92■■■■□ 3.98
PDCD2-211ENST00000544336 KRT27Q7Z3Y8 459 aa39.9■■■■□ 3.98
PDCD2-211ENST00000544336 FAM98CQ17RN3 349 aaKnown RBP39.89■■■■□ 3.98
PDCD2-211ENST00000544336 TOPAZ1Q8N9V7 1692 aa39.87■■■■□ 3.97
PDCD2-211ENST00000544336 NBPF1Q3BBV0 1214 aa39.87■■■■□ 3.97
PDCD2-211ENST00000544336 DEFB132Q7Z7B7 95 aa39.87■■■■□ 3.97
PDCD2-211ENST00000544336 SF3B2Q13435 895 aaKnown RBP39.86■■■■□ 3.97
PDCD2-211ENST00000544336 PRDM11Q9NQV5 511 aa39.85■■■■□ 3.97
PDCD2-211ENST00000544336 PHRF1Q9P1Y6 1649 aaKnown RBP39.83■■■■□ 3.97
PDCD2-211ENST00000544336 NUTM2GQ5VZR2 741 aa39.83■■■■□ 3.97
PDCD2-211ENST00000544336 ACEP12821 1306 aa39.81■■■■□ 3.96
PDCD2-211ENST00000544336 KIAA0232Q92628 1395 aa39.78■■■■□ 3.96
PDCD2-211ENST00000544336 CCDC61Q9Y6R9 512 aa39.78■■■■□ 3.96
PDCD2-211ENST00000544336 POLR3AO14802 1390 aaPredicted RBP39.77■■■■□ 3.96
PDCD2-211ENST00000544336 SPATA31A5Q5VU36 1347 aa39.77■■■■□ 3.96
PDCD2-211ENST00000544336 SPATA31A7Q8IWB4 1347 aa39.77■■■■□ 3.96
PDCD2-211ENST00000544336 CHRNA2Q15822 529 aa39.77■■■■□ 3.96
PDCD2-211ENST00000544336 SRCAPQ6ZRS2 3230 aa39.76■■■■□ 3.96
PDCD2-211ENST00000544336 NBPF8Q3BBV2 869 aa39.76■■■■□ 3.96
PDCD2-211ENST00000544336 ZC3H6P61129 1189 aaKnown RBP39.74■■■■□ 3.95
PDCD2-211ENST00000544336 SRPK2P78362 688 aaKnown RBP39.72■■■■□ 3.95
PDCD2-211ENST00000544336 CENPJQ9HC77 1338 aaPredicted RBP39.71■■■■□ 3.95
PDCD2-211ENST00000544336 PLEKHG3A1L390 1219 aa39.71■■■■□ 3.95
PDCD2-211ENST00000544336 QRICH2Q9H0J4 1663 aa39.7■■■■□ 3.95
PDCD2-211ENST00000544336 FAM182BQ5T319 152 aa39.7■■■■□ 3.95
PDCD2-211ENST00000544336 STRN4Q9NRL3 753 aa39.7■■■■□ 3.95
PDCD2-211ENST00000544336 THSD7AQ9UPZ6 1657 aa39.7■■■■□ 3.95
PDCD2-211ENST00000544336 PPIP5K1Q6PFW1 1433 aa39.67■■■■□ 3.94
PDCD2-211ENST00000544336 ABTB2Q8N961 1025 aa39.67■■■■□ 3.94
PDCD2-211ENST00000544336 CABP2Q9NPB3 220 aa39.67■■■■□ 3.94
PDCD2-211ENST00000544336 NRKQ7Z2Y5 1582 aa39.65■■■■□ 3.94
PDCD2-211ENST00000544336 SPATA31A1Q5TZJ5 1347 aa39.64■■■■□ 3.94
PDCD2-211ENST00000544336 BAG6P46379 1132 aa39.63■■■■□ 3.93
PDCD2-211ENST00000544336 L3MBTL2Q969R5 705 aa39.63■■■■□ 3.93
PDCD2-211ENST00000544336 RGPD1P0DJD0 1748 aa39.62■■■■□ 3.93
PDCD2-211ENST00000544336 SIN3AQ96ST3 1273 aa39.59■■■■□ 3.93
PDCD2-211ENST00000544336 USP35Q9P2H5 1018 aa39.59■■■■□ 3.93
PDCD2-211ENST00000544336 EVA1CP58658 441 aa39.58■■■■□ 3.93
PDCD2-211ENST00000544336 TRPM1Q7Z4N2 1603 aa39.55■■■■□ 3.92
PDCD2-211ENST00000544336 USP19O94966 1318 aa39.55■■■■□ 3.92
PDCD2-211ENST00000544336 SSH2Q76I76 1423 aa39.55■■■■□ 3.92
PDCD2-211ENST00000544336 EN1Q05925 392 aaPredicted RBP39.54■■■■□ 3.92
PDCD2-211ENST00000544336 CAMTA1Q9Y6Y1 1673 aa39.54■■■■□ 3.92
PDCD2-211ENST00000544336 NEUROD1Q13562 356 aa39.53■■■■□ 3.92
PDCD2-211ENST00000544336 NLRP13Q86W25 1043 aa39.53■■■■□ 3.92
PDCD2-211ENST00000544336 TNS1Q9HBL0 1735 aaKnown RBP39.52■■■■□ 3.92
PDCD2-211ENST00000544336 CABP1Q9NZU7 370 aa39.52■■■■□ 3.92
PDCD2-211ENST00000544336 LMO7Q8WWI1 1683 aa39.51■■■■□ 3.92
PDCD2-211ENST00000544336 CPDO75976 1380 aa39.5■■■■□ 3.91
PDCD2-211ENST00000544336 PSDA5PKW4 1024 aaPredicted RBP39.5■■■■□ 3.91
PDCD2-211ENST00000544336 LARP1Q6PKG0 1096 aaKnown RBP39.49■■■■□ 3.91
PDCD2-211ENST00000544336 GCP02774 474 aa39.48■■■■□ 3.91
PDCD2-211ENST00000544336 ZBTB7CA1YPR0 619 aa39.47■■■■□ 3.91
PDCD2-211ENST00000544336 USP6P35125 1406 aa39.46■■■■□ 3.91
PDCD2-211ENST00000544336 BRD4O60885 1362 aaPredicted RBP39.44■■■■□ 3.9
PDCD2-211ENST00000544336 ROCK2O75116 1388 aaKnown RBP39.44■■■■□ 3.9
PDCD2-211ENST00000544336 EVC2Q86UK5 1308 aa39.43■■■■□ 3.9
PDCD2-211ENST00000544336 TRIM37O94972 964 aa39.43■■■■□ 3.9
PDCD2-211ENST00000544336 BARGINQ6ZT62 677 aa39.43■■■■□ 3.9
PDCD2-211ENST00000544336 NLRP6P59044 892 aa39.42■■■■□ 3.9
PDCD2-211ENST00000544336 FAM196AQ6ZSG2 479 aa39.42■■■■□ 3.9
PDCD2-211ENST00000544336 PDE3BQ13370 1112 aa39.4■■■■□ 3.9
PDCD2-211ENST00000544336 TCP11L2Q8N4U5 519 aa39.4■■■■□ 3.9
PDCD2-211ENST00000544336 DISP2A7MBM2 1401 aa39.39■■■■□ 3.9
PDCD2-211ENST00000544336 COL5A2P05997 1499 aaPredicted RBP39.38■■■■□ 3.9
PDCD2-211ENST00000544336 LRP5O75197 1615 aa39.38■■■■□ 3.89
PDCD2-211ENST00000544336 PIK3C2AO00443 1686 aa39.38■■■■□ 3.89
PDCD2-211ENST00000544336 EZH2Q15910 746 aaKnown RBP39.37■■■■□ 3.89
PDCD2-211ENST00000544336 SLIT3O75094 1523 aa39.35■■■■□ 3.89
PDCD2-211ENST00000544336 APBA3O96018 575 aa39.32■■■■□ 3.89
PDCD2-211ENST00000544336 R3HDM1Q15032 1099 aaKnown RBP39.32■■■■□ 3.89
PDCD2-211ENST00000544336 AKAP12Q02952 1782 aa39.31■■■■□ 3.88
PDCD2-211ENST00000544336 THRAP3Q9Y2W1 955 aaKnown RBP39.31■■■■□ 3.88
PDCD2-211ENST00000544336 PARP4Q9UKK3 1724 aaKnown RBP39.3■■■■□ 3.88
PDCD2-211ENST00000544336 CAMKK2Q96RR4 588 aa39.29■■■■□ 3.88
PDCD2-211ENST00000544336 CRB1P82279 1406 aa39.29■■■■□ 3.88
PDCD2-211ENST00000544336 AATKQ6ZMQ8 1374 aa39.28■■■■□ 3.88
PDCD2-211ENST00000544336 TTC21BQ7Z4L5 1316 aa39.25■■■■□ 3.87
PDCD2-211ENST00000544336 COL18A1P39060 1754 aa39.25■■■■□ 3.87
PDCD2-211ENST00000544336 SOX12O15370 315 aa39.24■■■■□ 3.87
PDCD2-211ENST00000544336 ZNF692Q9BU19 519 aaPredicted RBP39.24■■■■□ 3.87
PDCD2-211ENST00000544336 TOM1L2Q6ZVM7 507 aa39.21■■■■□ 3.87
PDCD2-211ENST00000544336 RGPD5Q99666 1765 aa39.2■■■■□ 3.87
PDCD2-211ENST00000544336 RREB1Q92766 1687 aa39.19■■■■□ 3.86
PDCD2-211ENST00000544336 AXIN2Q9Y2T1 843 aa39.19■■■■□ 3.86
PDCD2-211ENST00000544336 CPSF1Q10570 1443 aaKnown RBP39.19■■■■□ 3.86
PDCD2-211ENST00000544336 LRRC37A3O60309 1634 aa39.18■■■■□ 3.86
PDCD2-211ENST00000544336 KTN1Q86UP2 1357 aaKnown RBP39.18■■■■□ 3.86
PDCD2-211ENST00000544336 PARD3Q8TEW0 1356 aa39.18■■■■□ 3.86
PDCD2-211ENST00000544336 NUP188Q5SRE5 1749 aa39.16■■■■□ 3.86
PDCD2-211ENST00000544336 WNK3Q9BYP7 1800 aa39.16■■■■□ 3.86
PDCD2-211ENST00000544336 TTC21AQ8NDW8 1320 aa39.15■■■■□ 3.86
PDCD2-211ENST00000544336 ARHGEF25Q86VW2 580 aa39.14■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms