RNA–Protein interactions for RNA: ENST00000544140.5

MRPL48-213, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 2

Gene MRPL48, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-213ENST00000544140 HIRIP3Q9BW71 556 aaPredicted RBP17.75■□□□□ 0.43
MRPL48-213ENST00000544140 COL14A1Q05707 1796 aaKnown RBP17.75■□□□□ 0.43
MRPL48-213ENST00000544140 MINK1Q8N4C8 1332 aaPredicted RBP17.74■□□□□ 0.43
MRPL48-213ENST00000544140 KRT27Q7Z3Y8 459 aa17.74■□□□□ 0.43
MRPL48-213ENST00000544140 ARHGEF28Q8N1W1 1705 aaKnown RBP17.73■□□□□ 0.43
MRPL48-213ENST00000544140 DEFB132Q7Z7B7 95 aa17.73■□□□□ 0.43
MRPL48-213ENST00000544140 ATP7BP35670 1465 aa17.73■□□□□ 0.43
MRPL48-213ENST00000544140 BTG4Q9NY30 223 aa17.72■□□□□ 0.43
MRPL48-213ENST00000544140 KDM2AQ9Y2K7 1162 aa17.71■□□□□ 0.43
MRPL48-213ENST00000544140 HOXD11P31277 338 aaPredicted RBP17.7■□□□□ 0.42
MRPL48-213ENST00000544140 CCDC9Q9Y3X0 531 aaKnown RBP17.7■□□□□ 0.42
MRPL48-213ENST00000544140 SPATA31A5Q5VU36 1347 aa17.7■□□□□ 0.42
MRPL48-213ENST00000544140 SPATA31A7Q8IWB4 1347 aa17.7■□□□□ 0.42
MRPL48-213ENST00000544140 ITSN1Q15811 1721 aa17.69■□□□□ 0.42
MRPL48-213ENST00000544140 THSD7AQ9UPZ6 1657 aa17.69■□□□□ 0.42
MRPL48-213ENST00000544140 POLR3AO14802 1390 aaPredicted RBP17.68■□□□□ 0.42
MRPL48-213ENST00000544140 PLEKHG5O94827 1062 aa17.68■□□□□ 0.42
MRPL48-213ENST00000544140 SF3B2Q13435 895 aaKnown RBP17.68■□□□□ 0.42
MRPL48-213ENST00000544140 FAM98CQ17RN3 349 aaKnown RBP17.68■□□□□ 0.42
MRPL48-213ENST00000544140 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
MRPL48-213ENST00000544140 NUDT16Q96DE0 195 aaKnown RBP17.68■□□□□ 0.42
MRPL48-213ENST00000544140 RNF216Q9NWF9 866 aaPredicted RBP17.67■□□□□ 0.42
MRPL48-213ENST00000544140 KIAA1210Q9ULL0 1709 aa17.67■□□□□ 0.42
MRPL48-213ENST00000544140 TOPAZ1Q8N9V7 1692 aa17.66■□□□□ 0.42
MRPL48-213ENST00000544140 LRP5O75197 1615 aa17.65■□□□□ 0.42
MRPL48-213ENST00000544140 DISP2A7MBM2 1401 aa17.65■□□□□ 0.42
MRPL48-213ENST00000544140 PLEKHG3A1L390 1219 aa17.64■□□□□ 0.41
MRPL48-213ENST00000544140 PRDM11Q9NQV5 511 aa17.64■□□□□ 0.41
MRPL48-213ENST00000544140 PHRF1Q9P1Y6 1649 aaKnown RBP17.64■□□□□ 0.41
MRPL48-213ENST00000544140 BAG6P46379 1132 aa17.63■□□□□ 0.41
MRPL48-213ENST00000544140 CDK19Q9BWU1 502 aa17.63■□□□□ 0.41
MRPL48-213ENST00000544140 SPATA31A1Q5TZJ5 1347 aa17.63■□□□□ 0.41
MRPL48-213ENST00000544140 KIAA0232Q92628 1395 aa17.63■□□□□ 0.41
MRPL48-213ENST00000544140 RGPD1P0DJD0 1748 aa17.62■□□□□ 0.41
MRPL48-213ENST00000544140 PAK3O75914 559 aaPredicted RBP17.62■□□□□ 0.41
MRPL48-213ENST00000544140 CCDC61Q9Y6R9 512 aa17.62■□□□□ 0.41
MRPL48-213ENST00000544140 NBPF8Q3BBV2 869 aa17.6■□□□□ 0.41
MRPL48-213ENST00000544140 ACEP12821 1306 aa17.6■□□□□ 0.41
MRPL48-213ENST00000544140 TNS1Q9HBL0 1735 aaKnown RBP17.6■□□□□ 0.41
MRPL48-213ENST00000544140 CPDO75976 1380 aa17.59■□□□□ 0.41
MRPL48-213ENST00000544140 A0A0G2JS52 829 aa17.59■□□□□ 0.41
MRPL48-213ENST00000544140 KCNA4P22459 653 aa17.59■□□□□ 0.41
MRPL48-213ENST00000544140 MYT1Q01538 1121 aa17.59■□□□□ 0.41
MRPL48-213ENST00000544140 NRKQ7Z2Y5 1582 aa17.58■□□□□ 0.41
MRPL48-213ENST00000544140 USP19O94966 1318 aa17.58■□□□□ 0.4
MRPL48-213ENST00000544140 LMO7Q8WWI1 1683 aa17.58■□□□□ 0.4
MRPL48-213ENST00000544140 EN1Q05925 392 aaPredicted RBP17.57■□□□□ 0.4
MRPL48-213ENST00000544140 NBPF1Q3BBV0 1214 aa17.57■□□□□ 0.4
MRPL48-213ENST00000544140 FAM182BQ5T319 152 aa17.57■□□□□ 0.4
MRPL48-213ENST00000544140 BARGINQ6ZT62 677 aa17.57■□□□□ 0.4
MRPL48-213ENST00000544140 SSH2Q76I76 1423 aa17.56■□□□□ 0.4
MRPL48-213ENST00000544140 CAMTA1Q9Y6Y1 1673 aa17.56■□□□□ 0.4
MRPL48-213ENST00000544140 CHRNA2Q15822 529 aa17.56■□□□□ 0.4
MRPL48-213ENST00000544140 BRD4O60885 1362 aaPredicted RBP17.55■□□□□ 0.4
MRPL48-213ENST00000544140 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
MRPL48-213ENST00000544140 ZC3H6P61129 1189 aaKnown RBP17.55■□□□□ 0.4
MRPL48-213ENST00000544140 FAM196AQ6ZSG2 479 aa17.54■□□□□ 0.4
MRPL48-213ENST00000544140 PSDA5PKW4 1024 aaPredicted RBP17.53■□□□□ 0.4
MRPL48-213ENST00000544140 NUTM2GQ5VZR2 741 aa17.53■□□□□ 0.4
MRPL48-213ENST00000544140 CAMKK2Q96RR4 588 aa17.53■□□□□ 0.4
MRPL48-213ENST00000544140 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
MRPL48-213ENST00000544140 ABTB2Q8N961 1025 aa17.52■□□□□ 0.4
MRPL48-213ENST00000544140 PPIP5K1Q6PFW1 1433 aa17.52■□□□□ 0.4
MRPL48-213ENST00000544140 CENPJQ9HC77 1338 aaPredicted RBP17.51■□□□□ 0.39
MRPL48-213ENST00000544140 STRN4Q9NRL3 753 aa17.51■□□□□ 0.39
MRPL48-213ENST00000544140 GCP02774 474 aa17.5■□□□□ 0.39
MRPL48-213ENST00000544140 LARP1Q6PKG0 1096 aaKnown RBP17.5■□□□□ 0.39
MRPL48-213ENST00000544140 NLRP13Q86W25 1043 aa17.5■□□□□ 0.39
MRPL48-213ENST00000544140 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
MRPL48-213ENST00000544140 TRIM37O94972 964 aa17.49■□□□□ 0.39
MRPL48-213ENST00000544140 EZH2Q15910 746 aaKnown RBP17.49■□□□□ 0.39
MRPL48-213ENST00000544140 TCP11L2Q8N4U5 519 aa17.49■□□□□ 0.39
MRPL48-213ENST00000544140 COL5A2P05997 1499 aaPredicted RBP17.49■□□□□ 0.39
MRPL48-213ENST00000544140 RREB1Q92766 1687 aa17.48■□□□□ 0.39
MRPL48-213ENST00000544140 USP6P35125 1406 aa17.47■□□□□ 0.39
MRPL48-213ENST00000544140 SLIT3O75094 1523 aa17.47■□□□□ 0.39
MRPL48-213ENST00000544140 PARP4Q9UKK3 1724 aaKnown RBP17.47■□□□□ 0.39
MRPL48-213ENST00000544140 EVA1CP58658 441 aa17.47■□□□□ 0.39
MRPL48-213ENST00000544140 SRPK2P78362 688 aaKnown RBP17.47■□□□□ 0.39
MRPL48-213ENST00000544140 R3HDM1Q15032 1099 aaKnown RBP17.47■□□□□ 0.39
MRPL48-213ENST00000544140 CABP2Q9NPB3 220 aa17.47■□□□□ 0.39
MRPL48-213ENST00000544140 QRICH2Q9H0J4 1663 aa17.47■□□□□ 0.39
MRPL48-213ENST00000544140 AATKQ6ZMQ8 1374 aa17.46■□□□□ 0.39
MRPL48-213ENST00000544140 USP35Q9P2H5 1018 aa17.46■□□□□ 0.39
MRPL48-213ENST00000544140 PDE3BQ13370 1112 aa17.45■□□□□ 0.38
MRPL48-213ENST00000544140 APBA3O96018 575 aa17.44■□□□□ 0.38
MRPL48-213ENST00000544140 CABP1Q9NZU7 370 aa17.44■□□□□ 0.38
MRPL48-213ENST00000544140 CRB1P82279 1406 aa17.44■□□□□ 0.38
MRPL48-213ENST00000544140 COL18A1P39060 1754 aa17.43■□□□□ 0.38
MRPL48-213ENST00000544140 C11orf95C9JLR9 678 aaPredicted RBP17.43■□□□□ 0.38
MRPL48-213ENST00000544140 L3MBTL2Q969R5 705 aa17.43■□□□□ 0.38
MRPL48-213ENST00000544140 NUP188Q5SRE5 1749 aa17.43■□□□□ 0.38
MRPL48-213ENST00000544140 PEAK1Q9H792 1746 aa17.43■□□□□ 0.38
MRPL48-213ENST00000544140 PIK3C2AO00443 1686 aa17.42■□□□□ 0.38
MRPL48-213ENST00000544140 TRPM1Q7Z4N2 1603 aa17.42■□□□□ 0.38
MRPL48-213ENST00000544140 NLRP6P59044 892 aa17.4■□□□□ 0.38
MRPL48-213ENST00000544140 RGPD3A6NKT7 1758 aaPredicted RBP17.39■□□□□ 0.37
MRPL48-213ENST00000544140 RGPD4Q7Z3J3 1758 aa17.39■□□□□ 0.37
MRPL48-213ENST00000544140 EVC2Q86UK5 1308 aa17.39■□□□□ 0.37
MRPL48-213ENST00000544140 LRRC37A3O60309 1634 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms