RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 REREQ9P2R6 1566 aa6.19□□□□□ -1.42
LMO3-229ENST00000543721 HMGN5P82970 282 aaKnown RBP6.19□□□□□ -1.42
LMO3-229ENST00000543721 CWC22Q9HCG8 908 aaKnown RBP6.19□□□□□ -1.42
LMO3-229ENST00000543721 BMP2KLQ5H9B9 411 aa6.18□□□□□ -1.42
LMO3-229ENST00000543721 KIAA1210Q9ULL0 1709 aa6.18□□□□□ -1.42
LMO3-229ENST00000543721 ADGRL1O94910 1474 aa6.18□□□□□ -1.42
LMO3-229ENST00000543721 POLA2Q14181 598 aa6.18□□□□□ -1.42
LMO3-229ENST00000543721 GTPBP4Q9BZE4 634 aaKnown RBP6.18□□□□□ -1.42
LMO3-229ENST00000543721 CCDC94Q9BW85 323 aaPredicted RBP6.18□□□□□ -1.42
LMO3-229ENST00000543721 MADDQ8WXG6 1647 aa6.18□□□□□ -1.42
LMO3-229ENST00000543721 PLB1Q6P1J6 1458 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 BAG4O95429 457 aaKnown RBP6.17□□□□□ -1.42
LMO3-229ENST00000543721 RLBP1P12271 317 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 HNRNPMP52272 730 aaKnown RBP eCLIP6.17□□□□□ -1.42
LMO3-229ENST00000543721 RBM10P98175 930 aaKnown RBP6.17□□□□□ -1.42
LMO3-229ENST00000543721 PRIMPOLQ96LW4 560 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 SPDYE4A6NLX3 237 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 KIF20AO95235 890 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 RABEP1Q15276 862 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 TCP11L2Q8N4U5 519 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 MYOM1P52179 1685 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 IQSEC2Q5JU85 1478 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 NUCB1Q02818 461 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 TAF3Q5VWG9 929 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 GCC1Q96CN9 775 aa6.17□□□□□ -1.42
LMO3-229ENST00000543721 ABCA8O94911 1581 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 MBD3O95983 291 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 SBNO2Q9Y2G9 1366 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 TRHP20396 242 aaPredicted RBP6.16□□□□□ -1.42
LMO3-229ENST00000543721 DMTNQ08495 405 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 ZNF428Q96B54 188 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 IL16Q14005 1332 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 SPHKAPQ2M3C7 1700 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 NEURL4Q96JN8 1562 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 ATF7IPQ6VMQ6 1270 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 MORC1Q86VD1 984 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 SYAP1Q96A49 352 aaPredicted RBP6.16□□□□□ -1.42
LMO3-229ENST00000543721 SMC4Q9NTJ3 1288 aa6.16□□□□□ -1.42
LMO3-229ENST00000543721 ABCC11Q96J66 1382 aa6.15□□□□□ -1.42
LMO3-229ENST00000543721 PREX2Q70Z35 1606 aa6.15□□□□□ -1.42
LMO3-229ENST00000543721 YEATS2Q9ULM3 1422 aa6.15□□□□□ -1.42
LMO3-229ENST00000543721 KIAA2012Q0VF49 1180 aa6.15□□□□□ -1.42
LMO3-229ENST00000543721 CHD1LQ86WJ1 897 aa6.15□□□□□ -1.42
LMO3-229ENST00000543721 LETM1O95202 739 aaPredicted RBP6.15□□□□□ -1.43
LMO3-229ENST00000543721 ZSCAN23Q3MJ62 389 aa6.15□□□□□ -1.43
LMO3-229ENST00000543721 ITPRIPQ8IWB1 547 aa6.15□□□□□ -1.43
LMO3-229ENST00000543721 ATP10BO94823 1461 aa6.15□□□□□ -1.43
LMO3-229ENST00000543721 MRC2Q9UBG0 1479 aa6.15□□□□□ -1.43
LMO3-229ENST00000543721 SSFA2P28290 1259 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 LRSAM1Q6UWE0 723 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 MYRIPQ8NFW9 859 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 SAMD9LQ8IVG5 1584 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 CEP152O94986 1710 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 CDC45O75419 566 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 NSD2O96028 1365 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 PHF14O94880 888 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 PTMAP06454 111 aaKnown RBP6.14□□□□□ -1.43
LMO3-229ENST00000543721 UVSSAQ2YD98 709 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 ALDH1L2Q3SY69 923 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 CAVIN1Q6NZI2 390 aaKnown RBP6.14□□□□□ -1.43
LMO3-229ENST00000543721 ZBTB40Q9NUA8 1239 aa6.14□□□□□ -1.43
LMO3-229ENST00000543721 TRPM2O94759 1503 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 XPCQ01831 940 aaPredicted RBP6.13□□□□□ -1.43
LMO3-229ENST00000543721 NEUROD2Q15784 382 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 MCTP1Q6DN14 999 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 FAM184AQ8NB25 1140 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 CFAP74Q9C0B2 1584 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 ST18O60284 1047 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 CAPN15O75808 1086 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 LMBRD1Q9NUN5 540 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 CYP2E1P05181 493 aaPredicted RBP6.13□□□□□ -1.43
LMO3-229ENST00000543721 TRIM27P14373 513 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 GTF2F1P35269 517 aaKnown RBP eCLIP6.13□□□□□ -1.43
LMO3-229ENST00000543721 CASC1Q6TDU7 716 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 PUS7Q96PZ0 661 aaKnown RBP6.13□□□□□ -1.43
LMO3-229ENST00000543721 KIF2CQ99661 725 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 BCL2L13Q9BXK5 485 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 RBSNQ9H1K0 784 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 ERVK-7P63135 1459 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 SHPRHQ149N8 1683 aa6.13□□□□□ -1.43
LMO3-229ENST00000543721 USP32Q8NFA0 1604 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 TPM3P06753 285 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 DNTTIP2Q5QJE6 756 aaKnown RBP6.12□□□□□ -1.43
LMO3-229ENST00000543721 GAS2L2Q8NHY3 880 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 ZNF518AQ6AHZ1 1483 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 BRPF1P55201 1214 aaPredicted RBP6.12□□□□□ -1.43
LMO3-229ENST00000543721 JPH4Q96JJ6 628 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 PTPRTO14522 1441 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 MYOM2P54296 1465 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 CARD14Q9BXL6 1004 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 LNPKQ9C0E8 428 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 DIAPH3Q9NSV4 1193 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.12□□□□□ -1.43
LMO3-229ENST00000543721 TNNQ9UQP3 1299 aa6.12□□□□□ -1.43
LMO3-229ENST00000543721 CDC42BPBQ9Y5S2 1711 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 ADGRB2O60241 1585 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 PRIM1P49642 420 aaKnown RBP6.11□□□□□ -1.43
LMO3-229ENST00000543721 MCM2P49736 904 aa6.11□□□□□ -1.43
LMO3-229ENST00000543721 CHAF1AQ13111 956 aaPredicted RBP6.11□□□□□ -1.43
LMO3-229ENST00000543721 RRP7AQ9Y3A4 280 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms