RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 CENPJQ9HC77 1338 aaPredicted RBP18.89■□□□□ 0.61
RTN3-213ENST00000543552 NBPF1Q3BBV0 1214 aa18.88■□□□□ 0.61
RTN3-213ENST00000543552 POLR3AO14802 1390 aaPredicted RBP18.88■□□□□ 0.61
RTN3-213ENST00000543552 BTG4Q9NY30 223 aa18.87■□□□□ 0.61
RTN3-213ENST00000543552 NRAPQ86VF7 1730 aa18.86■□□□□ 0.61
RTN3-213ENST00000543552 CRYBG1Q9Y4K1 1723 aa18.86■□□□□ 0.61
RTN3-213ENST00000543552 SRPK2P78362 688 aaKnown RBP18.86■□□□□ 0.61
RTN3-213ENST00000543552 SEPT12Q8IYM1 358 aa18.86■□□□□ 0.61
RTN3-213ENST00000543552 L3MBTL2Q969R5 705 aa18.86■□□□□ 0.61
RTN3-213ENST00000543552 PRDM11Q9NQV5 511 aa18.86■□□□□ 0.61
RTN3-213ENST00000543552 ACEP12821 1306 aa18.85■□□□□ 0.61
RTN3-213ENST00000543552 PLEKHG3A1L390 1219 aa18.85■□□□□ 0.61
RTN3-213ENST00000543552 ONECUT3O60422 494 aaPredicted RBP18.85■□□□□ 0.61
RTN3-213ENST00000543552 QRICH2Q9H0J4 1663 aa18.85■□□□□ 0.61
RTN3-213ENST00000543552 BLMP54132 1417 aaPredicted RBP18.84■□□□□ 0.61
RTN3-213ENST00000543552 PHRF1Q9P1Y6 1649 aaKnown RBP18.83■□□□□ 0.61
RTN3-213ENST00000543552 A0A0G2JS52 829 aa18.83■□□□□ 0.6
RTN3-213ENST00000543552 MYT1Q01538 1121 aa18.83■□□□□ 0.6
RTN3-213ENST00000543552 NBPF8Q3BBV2 869 aa18.83■□□□□ 0.6
RTN3-213ENST00000543552 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.6
RTN3-213ENST00000543552 BRD4O60885 1362 aaPredicted RBP18.82■□□□□ 0.6
RTN3-213ENST00000543552 BRWD3Q6RI45 1802 aa18.82■□□□□ 0.6
RTN3-213ENST00000543552 SF3B2Q13435 895 aaKnown RBP18.82■□□□□ 0.6
RTN3-213ENST00000543552 TRPM1Q7Z4N2 1603 aa18.82■□□□□ 0.6
RTN3-213ENST00000543552 KRT27Q7Z3Y8 459 aa18.81■□□□□ 0.6
RTN3-213ENST00000543552 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
RTN3-213ENST00000543552 NEUROD1Q13562 356 aa18.8■□□□□ 0.6
RTN3-213ENST00000543552 ZRANB1Q9UGI0 708 aa18.8■□□□□ 0.6
RTN3-213ENST00000543552 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
RTN3-213ENST00000543552 FAM98CQ17RN3 349 aaKnown RBP18.79■□□□□ 0.6
RTN3-213ENST00000543552 ABTB2Q8N961 1025 aa18.79■□□□□ 0.6
RTN3-213ENST00000543552 SIN3AQ96ST3 1273 aa18.79■□□□□ 0.6
RTN3-213ENST00000543552 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
RTN3-213ENST00000543552 EVC2Q86UK5 1308 aa18.78■□□□□ 0.6
RTN3-213ENST00000543552 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
RTN3-213ENST00000543552 SRCAPQ6ZRS2 3230 aa18.78■□□□□ 0.6
RTN3-213ENST00000543552 CABP2Q9NPB3 220 aa18.78■□□□□ 0.6
RTN3-213ENST00000543552 NRKQ7Z2Y5 1582 aa18.76■□□□□ 0.59
RTN3-213ENST00000543552 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
RTN3-213ENST00000543552 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
RTN3-213ENST00000543552 USP19O94966 1318 aa18.75■□□□□ 0.59
RTN3-213ENST00000543552 ZC3H6P61129 1189 aaKnown RBP18.75■□□□□ 0.59
RTN3-213ENST00000543552 CPDO75976 1380 aa18.75■□□□□ 0.59
RTN3-213ENST00000543552 CHRNA2Q15822 529 aa18.74■□□□□ 0.59
RTN3-213ENST00000543552 USP6P35125 1406 aa18.74■□□□□ 0.59
RTN3-213ENST00000543552 THSD7AQ9UPZ6 1657 aa18.73■□□□□ 0.59
RTN3-213ENST00000543552 STRN4Q9NRL3 753 aa18.73■□□□□ 0.59
RTN3-213ENST00000543552 SPATA31A1Q5TZJ5 1347 aa18.73■□□□□ 0.59
RTN3-213ENST00000543552 EVA1CP58658 441 aa18.72■□□□□ 0.59
RTN3-213ENST00000543552 CABP1Q9NZU7 370 aa18.72■□□□□ 0.59
RTN3-213ENST00000543552 SSH2Q76I76 1423 aa18.71■□□□□ 0.59
RTN3-213ENST00000543552 GCP02774 474 aa18.7■□□□□ 0.58
RTN3-213ENST00000543552 BAG6P46379 1132 aa18.7■□□□□ 0.58
RTN3-213ENST00000543552 TONSLQ96HA7 1378 aa18.69■□□□□ 0.58
RTN3-213ENST00000543552 RGPD1P0DJD0 1748 aa18.69■□□□□ 0.58
RTN3-213ENST00000543552 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
RTN3-213ENST00000543552 NLRP6P59044 892 aa18.68■□□□□ 0.58
RTN3-213ENST00000543552 DEFB132Q7Z7B7 95 aa18.68■□□□□ 0.58
RTN3-213ENST00000543552 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
RTN3-213ENST00000543552 LMO7Q8WWI1 1683 aa18.68■□□□□ 0.58
RTN3-213ENST00000543552 CAMTA1Q9Y6Y1 1673 aa18.66■□□□□ 0.58
RTN3-213ENST00000543552 SLIT3O75094 1523 aa18.66■□□□□ 0.58
RTN3-213ENST00000543552 BARGINQ6ZT62 677 aa18.66■□□□□ 0.58
RTN3-213ENST00000543552 CARD11Q9BXL7 1154 aa18.66■□□□□ 0.58
RTN3-213ENST00000543552 USP35Q9P2H5 1018 aa18.65■□□□□ 0.58
RTN3-213ENST00000543552 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
RTN3-213ENST00000543552 COL5A2P05997 1499 aaPredicted RBP18.65■□□□□ 0.58
RTN3-213ENST00000543552 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
RTN3-213ENST00000543552 TCP11L2Q8N4U5 519 aa18.64■□□□□ 0.57
RTN3-213ENST00000543552 TTC21AQ8NDW8 1320 aa18.64■□□□□ 0.57
RTN3-213ENST00000543552 AKAP12Q02952 1782 aa18.63■□□□□ 0.57
RTN3-213ENST00000543552 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
RTN3-213ENST00000543552 FAM196AQ6ZSG2 479 aa18.63■□□□□ 0.57
RTN3-213ENST00000543552 AATKQ6ZMQ8 1374 aa18.63■□□□□ 0.57
RTN3-213ENST00000543552 PDE3BQ13370 1112 aa18.62■□□□□ 0.57
RTN3-213ENST00000543552 KCNH5Q8NCM2 988 aa18.62■□□□□ 0.57
RTN3-213ENST00000543552 DISP2A7MBM2 1401 aa18.62■□□□□ 0.57
RTN3-213ENST00000543552 CRB1P82279 1406 aa18.61■□□□□ 0.57
RTN3-213ENST00000543552 CPSF1Q10570 1443 aaKnown RBP18.61■□□□□ 0.57
RTN3-213ENST00000543552 KTN1Q86UP2 1357 aaKnown RBP18.61■□□□□ 0.57
RTN3-213ENST00000543552 TTC21BQ7Z4L5 1316 aa18.61■□□□□ 0.57
RTN3-213ENST00000543552 ZBTB7CA1YPR0 619 aa18.61■□□□□ 0.57
RTN3-213ENST00000543552 TRIM26Q12899 539 aaPredicted RBP18.6■□□□□ 0.57
RTN3-213ENST00000543552 FAM182BQ5T319 152 aa18.6■□□□□ 0.57
RTN3-213ENST00000543552 C11orf95C9JLR9 678 aaPredicted RBP18.59■□□□□ 0.57
RTN3-213ENST00000543552 TNS1Q9HBL0 1735 aaKnown RBP18.59■□□□□ 0.57
RTN3-213ENST00000543552 MON2Q7Z3U7 1717 aa18.57■□□□□ 0.56
RTN3-213ENST00000543552 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
RTN3-213ENST00000543552 PARD3Q8TEW0 1356 aa18.57■□□□□ 0.56
RTN3-213ENST00000543552 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
RTN3-213ENST00000543552 EN1Q05925 392 aaPredicted RBP18.56■□□□□ 0.56
RTN3-213ENST00000543552 ABCC6O95255 1503 aa18.55■□□□□ 0.56
RTN3-213ENST00000543552 TRIM37O94972 964 aa18.55■□□□□ 0.56
RTN3-213ENST00000543552 TOM1L2Q6ZVM7 507 aa18.55■□□□□ 0.56
RTN3-213ENST00000543552 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
RTN3-213ENST00000543552 WDR17Q8IZU2 1322 aa18.54■□□□□ 0.56
RTN3-213ENST00000543552 ARHGEF25Q86VW2 580 aa18.54■□□□□ 0.56
RTN3-213ENST00000543552 TMC1Q8TDI8 760 aa18.54■□□□□ 0.56
RTN3-213ENST00000543552 PUS7Q96PZ0 661 aaKnown RBP18.54■□□□□ 0.56
RTN3-213ENST00000543552 COL18A1P39060 1754 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms