RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 PARD3Q8TEW0 1356 aa10.36□□□□□ -0.75
TRIM59-208ENST00000543469 POLR1AO95602 1720 aaPredicted RBP10.36□□□□□ -0.75
TRIM59-208ENST00000543469 ERICH6BQ5W0A0 696 aa10.36□□□□□ -0.75
TRIM59-208ENST00000543469 NPM2Q86SE8 214 aaKnown RBP10.36□□□□□ -0.75
TRIM59-208ENST00000543469 KRT28Q7Z3Y7 464 aa10.35□□□□□ -0.75
TRIM59-208ENST00000543469 GAS2L2Q8NHY3 880 aa10.35□□□□□ -0.75
TRIM59-208ENST00000543469 PMFBP1Q8TBY8 1022 aa10.35□□□□□ -0.75
TRIM59-208ENST00000543469 ADGRB1O14514 1584 aa10.35□□□□□ -0.75
TRIM59-208ENST00000543469 KIF24Q5T7B8 1368 aa10.35□□□□□ -0.75
TRIM59-208ENST00000543469 HSPA2P54652 639 aa10.35□□□□□ -0.75
TRIM59-208ENST00000543469 EVA1CP58658 441 aa10.35□□□□□ -0.75
TRIM59-208ENST00000543469 POLR3AO14802 1390 aaPredicted RBP10.34□□□□□ -0.75
TRIM59-208ENST00000543469 SIGLEC1Q9BZZ2 1709 aa10.34□□□□□ -0.75
TRIM59-208ENST00000543469 MTHFSP49914 203 aa10.34□□□□□ -0.75
TRIM59-208ENST00000543469 GOLGA2Q08379 1002 aa10.34□□□□□ -0.75
TRIM59-208ENST00000543469 NCBP3Q53F19 620 aaKnown RBP10.34□□□□□ -0.75
TRIM59-208ENST00000543469 ROBO2Q9HCK4 1378 aa10.34□□□□□ -0.75
TRIM59-208ENST00000543469 LMTK3Q96Q04 1460 aa10.33□□□□□ -0.76
TRIM59-208ENST00000543469 E9PSI1 815 aa10.33□□□□□ -0.76
TRIM59-208ENST00000543469 FCHSD2O94868 740 aa10.33□□□□□ -0.76
TRIM59-208ENST00000543469 C1orf141Q5JVX7 400 aa10.33□□□□□ -0.76
TRIM59-208ENST00000543469 A0A1W2PP64 1363 aa10.33□□□□□ -0.76
TRIM59-208ENST00000543469 C11orf95C9JLR9 678 aaPredicted RBP10.33□□□□□ -0.76
TRIM59-208ENST00000543469 KNDC1Q76NI1 1749 aa10.33□□□□□ -0.76
TRIM59-208ENST00000543469 TMEM94Q12767 1356 aa10.32□□□□□ -0.76
TRIM59-208ENST00000543469 HSP90AB1P08238 724 aaKnown RBP10.32□□□□□ -0.76
TRIM59-208ENST00000543469 PLEKHO1Q53GL0 409 aaPredicted RBP10.32□□□□□ -0.76
TRIM59-208ENST00000543469 SOX12O15370 315 aa10.32□□□□□ -0.76
TRIM59-208ENST00000543469 IPO8O15397 1037 aaKnown RBP10.32□□□□□ -0.76
TRIM59-208ENST00000543469 AMER1Q5JTC6 1135 aaPredicted RBP10.32□□□□□ -0.76
TRIM59-208ENST00000543469 RAPGEF4Q8WZA2 1011 aa10.32□□□□□ -0.76
TRIM59-208ENST00000543469 HDAC5Q9UQL6 1122 aa10.32□□□□□ -0.76
TRIM59-208ENST00000543469 PNISRQ8TF01 805 aaKnown RBP10.31□□□□□ -0.76
TRIM59-208ENST00000543469 LRRC59Q96AG4 307 aaKnown RBP10.31□□□□□ -0.76
TRIM59-208ENST00000543469 AATKQ6ZMQ8 1374 aa10.31□□□□□ -0.76
TRIM59-208ENST00000543469 CT47B1P0C2W7 299 aaPredicted RBP10.3□□□□□ -0.76
TRIM59-208ENST00000543469 CDC42BPGQ6DT37 1551 aa10.3□□□□□ -0.76
TRIM59-208ENST00000543469 RTL1A6NKG5 1358 aa10.3□□□□□ -0.76
TRIM59-208ENST00000543469 MEX3CQ5U5Q3 659 aaKnown RBP10.3□□□□□ -0.76
TRIM59-208ENST00000543469 FLT4P35916 1363 aa10.29□□□□□ -0.76
TRIM59-208ENST00000543469 EIF5BO60841 1220 aaKnown RBP10.29□□□□□ -0.76
TRIM59-208ENST00000543469 TATP17735 454 aaPredicted RBP10.29□□□□□ -0.76
TRIM59-208ENST00000543469 GNAI1P63096 354 aa10.29□□□□□ -0.76
TRIM59-208ENST00000543469 AMOTQ4VCS5 1084 aa10.29□□□□□ -0.76
TRIM59-208ENST00000543469 PLEKHH1Q9ULM0 1364 aa10.29□□□□□ -0.76
TRIM59-208ENST00000543469 ITSN1Q15811 1721 aa10.29□□□□□ -0.76
TRIM59-208ENST00000543469 SPG7Q9UQ90 795 aa10.29□□□□□ -0.76
TRIM59-208ENST00000543469 FYB1O15117 783 aa10.28□□□□□ -0.76
TRIM59-208ENST00000543469 WDR63Q8IWG1 891 aa10.28□□□□□ -0.76
TRIM59-208ENST00000543469 ARHGEF28Q8N1W1 1705 aaKnown RBP10.28□□□□□ -0.76
TRIM59-208ENST00000543469 PER1O15534 1290 aaPredicted RBP10.28□□□□□ -0.76
TRIM59-208ENST00000543469 PRDM11Q9NQV5 511 aa10.28□□□□□ -0.76
TRIM59-208ENST00000543469 USP6P35125 1406 aa10.28□□□□□ -0.76
TRIM59-208ENST00000543469 SBNO1A3KN83 1393 aa10.27□□□□□ -0.76
TRIM59-208ENST00000543469 ADGRB2O60241 1585 aa10.27□□□□□ -0.77
TRIM59-208ENST00000543469 NME9Q86XW9 330 aa10.27□□□□□ -0.77
TRIM59-208ENST00000543469 ZNF428Q96B54 188 aa10.27□□□□□ -0.77
TRIM59-208ENST00000543469 SLAIN2Q9P270 581 aa10.27□□□□□ -0.77
TRIM59-208ENST00000543469 AAMPQ13685 434 aa10.27□□□□□ -0.77
TRIM59-208ENST00000543469 FOXO3O43524 673 aa10.26□□□□□ -0.77
TRIM59-208ENST00000543469 SALL2Q9Y467 1007 aaPredicted RBP10.26□□□□□ -0.77
TRIM59-208ENST00000543469 KDM4FA0A1W2PPD8 638 aa10.26□□□□□ -0.77
TRIM59-208ENST00000543469 NEUROD2Q15784 382 aa10.26□□□□□ -0.77
TRIM59-208ENST00000543469 UBAP1LF5GYI3 381 aa10.25□□□□□ -0.77
TRIM59-208ENST00000543469 HTATSF1O43719 755 aaKnown RBP10.25□□□□□ -0.77
TRIM59-208ENST00000543469 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
TRIM59-208ENST00000543469 TEFQ10587 303 aa10.25□□□□□ -0.77
TRIM59-208ENST00000543469 CDCA7Q9BWT1 371 aaPredicted RBP10.25□□□□□ -0.77
TRIM59-208ENST00000543469 STK31Q9BXU1 1019 aa10.25□□□□□ -0.77
TRIM59-208ENST00000543469 NLRP2Q9NX02 1062 aa10.25□□□□□ -0.77
TRIM59-208ENST00000543469 USP31Q70CQ4 1352 aa10.25□□□□□ -0.77
TRIM59-208ENST00000543469 LTV1Q96GA3 475 aaPredicted RBP10.24□□□□□ -0.77
TRIM59-208ENST00000543469 CCDC9Q9Y3X0 531 aaKnown RBP10.24□□□□□ -0.77
TRIM59-208ENST00000543469 MYO5BQ9ULV0 1848 aa10.24□□□□□ -0.77
TRIM59-208ENST00000543469 USP32Q8NFA0 1604 aa10.24□□□□□ -0.77
TRIM59-208ENST00000543469 FTSJ3Q8IY81 847 aaKnown RBP10.24□□□□□ -0.77
TRIM59-208ENST00000543469 KIF1AQ12756 1690 aa10.24□□□□□ -0.77
TRIM59-208ENST00000543469 IL16Q14005 1332 aa10.24□□□□□ -0.77
TRIM59-208ENST00000543469 RIPK4P57078 832 aa10.24□□□□□ -0.77
TRIM59-208ENST00000543469 LAS1LQ9Y4W2 734 aaKnown RBP10.23□□□□□ -0.77
TRIM59-208ENST00000543469 NFE2L2Q16236 605 aa10.23□□□□□ -0.77
TRIM59-208ENST00000543469 IP6K1Q92551 441 aa10.22□□□□□ -0.77
TRIM59-208ENST00000543469 CARD14Q9BXL6 1004 aa10.22□□□□□ -0.77
TRIM59-208ENST00000543469 ADAMTS8Q9UP79 889 aa10.22□□□□□ -0.77
TRIM59-208ENST00000543469 A0A0G2JS52 829 aa10.22□□□□□ -0.77
TRIM59-208ENST00000543469 APAF1O14727 1248 aa10.22□□□□□ -0.77
TRIM59-208ENST00000543469 MYT1Q01538 1121 aa10.22□□□□□ -0.77
TRIM59-208ENST00000543469 RCAN3Q9UKA8 241 aa10.22□□□□□ -0.77
TRIM59-208ENST00000543469 CPSF1Q10570 1443 aaKnown RBP10.22□□□□□ -0.77
TRIM59-208ENST00000543469 PTPRUQ92729 1446 aa10.22□□□□□ -0.77
TRIM59-208ENST00000543469 PRKAR2BP31323 418 aa10.21□□□□□ -0.77
TRIM59-208ENST00000543469 CCDC27Q2M243 656 aa10.21□□□□□ -0.77
TRIM59-208ENST00000543469 SOS1Q07889 1333 aaPredicted RBP10.21□□□□□ -0.77
TRIM59-208ENST00000543469 C1orf167Q5SNV9 1468 aa10.21□□□□□ -0.78
TRIM59-208ENST00000543469 CDK12Q9NYV4 1490 aaPredicted RBP10.21□□□□□ -0.78
TRIM59-208ENST00000543469 TCP11L2Q8N4U5 519 aa10.21□□□□□ -0.78
TRIM59-208ENST00000543469 CCDC146Q8IYE0 955 aa10.21□□□□□ -0.78
TRIM59-208ENST00000543469 TTC5Q8N0Z6 440 aa10.21□□□□□ -0.78
TRIM59-208ENST00000543469 NWD1Q149M9 1564 aa10.21□□□□□ -0.78
TRIM59-208ENST00000543469 NUTM2GQ5VZR2 741 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms