RNA–Protein interactions for RNA: ENST00000543322.5

PTCD2-212, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-212ENST00000543322 TMPOP42166 694 aaKnown RBP16.44■□□□□ 0.22
PTCD2-212ENST00000543322 HDAC1Q13547 482 aaPredicted RBP16.44■□□□□ 0.22
PTCD2-212ENST00000543322 EXOSC9Q06265 439 aaKnown RBP16.43■□□□□ 0.22
PTCD2-212ENST00000543322 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
PTCD2-212ENST00000543322 TRIM27P14373 513 aa16.43■□□□□ 0.22
PTCD2-212ENST00000543322 SLKQ9H2G2 1235 aaPredicted RBP16.43■□□□□ 0.22
PTCD2-212ENST00000543322 SMC4Q9NTJ3 1288 aa16.43■□□□□ 0.22
PTCD2-212ENST00000543322 NPM1P06748 294 aaKnown RBP eCLIP16.42■□□□□ 0.22
PTCD2-212ENST00000543322 NUTM2DQ5VT03 806 aaPredicted RBP16.42■□□□□ 0.22
PTCD2-212ENST00000543322 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
PTCD2-212ENST00000543322 SSH1Q8WYL5 1049 aa16.41■□□□□ 0.22
PTCD2-212ENST00000543322 POGKQ9P215 609 aa16.41■□□□□ 0.22
PTCD2-212ENST00000543322 PNPLA6Q8IY17 1366 aa16.41■□□□□ 0.22
PTCD2-212ENST00000543322 LRRC7Q96NW7 1537 aa16.4■□□□□ 0.22
PTCD2-212ENST00000543322 ATF7IPQ6VMQ6 1270 aa16.4■□□□□ 0.22
PTCD2-212ENST00000543322 GGNBP2Q9H3C7 697 aa16.4■□□□□ 0.22
PTCD2-212ENST00000543322 U2SURPO15042 1029 aaKnown RBP16.4■□□□□ 0.22
PTCD2-212ENST00000543322 YTHDC2Q9H6S0 1430 aaKnown RBP16.39■□□□□ 0.21
PTCD2-212ENST00000543322 SRPK2P78362 688 aaKnown RBP16.39■□□□□ 0.21
PTCD2-212ENST00000543322 IDI1Q13907 227 aa16.39■□□□□ 0.21
PTCD2-212ENST00000543322 SMC5Q8IY18 1101 aa16.39■□□□□ 0.21
PTCD2-212ENST00000543322 SLC52A1Q9NWF4 448 aa16.39■□□□□ 0.21
PTCD2-212ENST00000543322 FYB1O15117 783 aa16.38■□□□□ 0.21
PTCD2-212ENST00000543322 SAFB2Q14151 953 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTCD2-212ENST00000543322 TERF2IPQ9NYB0 399 aa16.38■□□□□ 0.21
PTCD2-212ENST00000543322 ITPRIPQ8IWB1 547 aa16.38■□□□□ 0.21
PTCD2-212ENST00000543322 ARHGEF40Q8TER5 1519 aa16.38■□□□□ 0.21
PTCD2-212ENST00000543322 KIF16BQ96L93 1317 aa16.37■□□□□ 0.21
PTCD2-212ENST00000543322 ANO8Q9HCE9 1232 aaPredicted RBP16.37■□□□□ 0.21
PTCD2-212ENST00000543322 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
PTCD2-212ENST00000543322 PPIP5K1Q6PFW1 1433 aa16.37■□□□□ 0.21
PTCD2-212ENST00000543322 NOB1Q9ULX3 412 aaKnown RBP16.36■□□□□ 0.21
PTCD2-212ENST00000543322 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
PTCD2-212ENST00000543322 C22orf23Q9BZE7 217 aa16.36■□□□□ 0.21
PTCD2-212ENST00000543322 ZBTB40Q9NUA8 1239 aa16.36■□□□□ 0.21
PTCD2-212ENST00000543322 TMEM57Q8N5G2 664 aa16.35■□□□□ 0.21
PTCD2-212ENST00000543322 STK26Q9P289 416 aa16.35■□□□□ 0.21
PTCD2-212ENST00000543322 DIAPH1O60610 1272 aaKnown RBP16.35■□□□□ 0.21
PTCD2-212ENST00000543322 RAPGEF3O95398 923 aa16.35■□□□□ 0.21
PTCD2-212ENST00000543322 RIPK4P57078 832 aa16.35■□□□□ 0.21
PTCD2-212ENST00000543322 ALDH1L2Q3SY69 923 aa16.35■□□□□ 0.21
PTCD2-212ENST00000543322 PNNQ9H307 717 aaKnown RBP16.35■□□□□ 0.21
PTCD2-212ENST00000543322 MINK1Q8N4C8 1332 aaPredicted RBP16.34■□□□□ 0.21
PTCD2-212ENST00000543322 PRAM1Q96QH2 718 aa16.34■□□□□ 0.21
PTCD2-212ENST00000543322 DLC1Q96QB1 1528 aa16.33■□□□□ 0.21
PTCD2-212ENST00000543322 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.21
PTCD2-212ENST00000543322 YEATS2Q9ULM3 1422 aa16.33■□□□□ 0.2
PTCD2-212ENST00000543322 NCOA3Q9Y6Q9 1424 aa16.33■□□□□ 0.2
PTCD2-212ENST00000543322 ATP7BP35670 1465 aa16.33■□□□□ 0.2
PTCD2-212ENST00000543322 IPO8O15397 1037 aaKnown RBP16.33■□□□□ 0.2
PTCD2-212ENST00000543322 MFAP1P55081 439 aaKnown RBP16.33■□□□□ 0.2
PTCD2-212ENST00000543322 SETD1AO15047 1707 aaKnown RBP16.32■□□□□ 0.2
PTCD2-212ENST00000543322 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
PTCD2-212ENST00000543322 L1TD1Q5T7N2 865 aaKnown RBP16.32■□□□□ 0.2
PTCD2-212ENST00000543322 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
PTCD2-212ENST00000543322 NUCB1Q02818 461 aa16.31■□□□□ 0.2
PTCD2-212ENST00000543322 CHMP5Q9NZZ3 219 aa16.31■□□□□ 0.2
PTCD2-212ENST00000543322 PIK3R4Q99570 1358 aa16.31■□□□□ 0.2
PTCD2-212ENST00000543322 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
PTCD2-212ENST00000543322 RIMBP3CA6NJZ7 1639 aa16.3■□□□□ 0.2
PTCD2-212ENST00000543322 RIMBP3BA6NNM3 1639 aa16.3■□□□□ 0.2
PTCD2-212ENST00000543322 RIMBP3Q9UFD9 1639 aa16.3■□□□□ 0.2
PTCD2-212ENST00000543322 FCHSD2O94868 740 aa16.3■□□□□ 0.2
PTCD2-212ENST00000543322 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
PTCD2-212ENST00000543322 MCM4P33991 863 aa16.29■□□□□ 0.2
PTCD2-212ENST00000543322 RSPH6AQ9H0K4 717 aa16.29■□□□□ 0.2
PTCD2-212ENST00000543322 REREQ9P2R6 1566 aa16.29■□□□□ 0.2
PTCD2-212ENST00000543322 RBM25P49756 843 aaKnown RBP16.28■□□□□ 0.2
PTCD2-212ENST00000543322 CDK19Q9BWU1 502 aa16.28■□□□□ 0.2
PTCD2-212ENST00000543322 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
PTCD2-212ENST00000543322 MAP2P11137 1827 aaKnown RBP16.28■□□□□ 0.2
PTCD2-212ENST00000543322 FSD2A1L4K1 749 aa16.26■□□□□ 0.19
PTCD2-212ENST00000543322 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
PTCD2-212ENST00000543322 PRKAR2BP31323 418 aa16.26■□□□□ 0.19
PTCD2-212ENST00000543322 DDIT3P35638 169 aa16.26■□□□□ 0.19
PTCD2-212ENST00000543322 CHD1LQ86WJ1 897 aa16.26■□□□□ 0.19
PTCD2-212ENST00000543322 SNX21Q969T3 373 aa16.26■□□□□ 0.19
PTCD2-212ENST00000543322 CDK12Q9NYV4 1490 aaPredicted RBP16.26■□□□□ 0.19
PTCD2-212ENST00000543322 SPRYD3Q8NCJ5 442 aa16.25■□□□□ 0.19
PTCD2-212ENST00000543322 CABP1Q9NZU7 370 aa16.25■□□□□ 0.19
PTCD2-212ENST00000543322 NFE2L2Q16236 605 aa16.24■□□□□ 0.19
PTCD2-212ENST00000543322 ARHGAP45Q92619 1136 aa16.24■□□□□ 0.19
PTCD2-212ENST00000543322 POLKQ9UBT6 870 aa16.24■□□□□ 0.19
PTCD2-212ENST00000543322 DLG5Q8TDM6 1919 aa16.24■□□□□ 0.19
PTCD2-212ENST00000543322 BMP2KLQ5H9B9 411 aa16.24■□□□□ 0.19
PTCD2-212ENST00000543322 LNPKQ9C0E8 428 aa16.24■□□□□ 0.19
PTCD2-212ENST00000543322 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
PTCD2-212ENST00000543322 MRPL50Q8N5N7 158 aaKnown RBP16.23■□□□□ 0.19
PTCD2-212ENST00000543322 CHMP4BQ9H444 224 aaKnown RBP16.23■□□□□ 0.19
PTCD2-212ENST00000543322 CALD1Q05682 793 aaKnown RBP16.23■□□□□ 0.19
PTCD2-212ENST00000543322 GCC1Q96CN9 775 aa16.23■□□□□ 0.19
PTCD2-212ENST00000543322 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
PTCD2-212ENST00000543322 MON2Q7Z3U7 1717 aa16.22■□□□□ 0.19
PTCD2-212ENST00000543322 ZBTB7BO15156 539 aaPredicted RBP16.22■□□□□ 0.19
PTCD2-212ENST00000543322 ABCC4O15439 1325 aa16.22■□□□□ 0.19
PTCD2-212ENST00000543322 CPSF1Q10570 1443 aaKnown RBP16.22■□□□□ 0.19
PTCD2-212ENST00000543322 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
PTCD2-212ENST00000543322 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
PTCD2-212ENST00000543322 DDX11L8A8MPP1 907 aa16.21■□□□□ 0.19
PTCD2-212ENST00000543322 VAMP4O75379 141 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms