RNA–Protein interactions for RNA: ENST00000543237.5

GPHN-204, Transcript of gephyrin, humanhuman

TSL 2 BASIC

Gene GPHN, Length 2,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-204ENST00000543237 PPP4R3BQ5MIZ7 849 aa7.21□□□□□ -1.26
GPHN-204ENST00000543237 RIMS2Q9UQ26 1411 aa7.2□□□□□ -1.26
GPHN-204ENST00000543237 HNRNPUQ00839 825 aaKnown RBP eCLIP7.2□□□□□ -1.26
GPHN-204ENST00000543237 DCAF11Q8TEB1 546 aa7.2□□□□□ -1.26
GPHN-204ENST00000543237 SLC26A8Q96RN1 970 aa7.2□□□□□ -1.26
GPHN-204ENST00000543237 MYO5BQ9ULV0 1848 aa7.2□□□□□ -1.26
GPHN-204ENST00000543237 TMEM131LA2VDJ0 1609 aa7.2□□□□□ -1.26
GPHN-204ENST00000543237 DSG3P32926 999 aa7.2□□□□□ -1.26
GPHN-204ENST00000543237 FAM193AP78312 1265 aa7.2□□□□□ -1.26
GPHN-204ENST00000543237 SPHKAPQ2M3C7 1700 aa7.2□□□□□ -1.26
GPHN-204ENST00000543237 HFM1A2PYH4 1435 aa7.2□□□□□ -1.26
GPHN-204ENST00000543237 TERF1P54274 439 aa7.19□□□□□ -1.26
GPHN-204ENST00000543237 KCNG1Q9UIX4 513 aa7.19□□□□□ -1.26
GPHN-204ENST00000543237 LRRC7Q96NW7 1537 aa7.19□□□□□ -1.26
GPHN-204ENST00000543237 LAS1LQ9Y4W2 734 aaKnown RBP7.19□□□□□ -1.26
GPHN-204ENST00000543237 PLEKHG1Q9ULL1 1385 aa7.18□□□□□ -1.26
GPHN-204ENST00000543237 STRCP1A6NGW2 1772 aa7.18□□□□□ -1.26
GPHN-204ENST00000543237 KCNA6P17658 529 aa7.18□□□□□ -1.26
GPHN-204ENST00000543237 NFKBIBQ15653 356 aa7.18□□□□□ -1.26
GPHN-204ENST00000543237 NUTM2DQ5VT03 806 aaPredicted RBP7.18□□□□□ -1.26
GPHN-204ENST00000543237 ZFYVE9O95405 1425 aa7.18□□□□□ -1.26
GPHN-204ENST00000543237 PROSER2Q86WR7 435 aaPredicted RBP7.18□□□□□ -1.26
GPHN-204ENST00000543237 GTPBP4Q9BZE4 634 aaKnown RBP7.18□□□□□ -1.26
GPHN-204ENST00000543237 HDAC5Q9UQL6 1122 aa7.18□□□□□ -1.26
GPHN-204ENST00000543237 PHF14O94880 888 aa7.17□□□□□ -1.26
GPHN-204ENST00000543237 TRIM44Q96DX7 344 aaPredicted RBP7.17□□□□□ -1.26
GPHN-204ENST00000543237 PLCD4Q9BRC7 762 aa7.17□□□□□ -1.26
GPHN-204ENST00000543237 GOLGA6L3A6NEY3 463 aa7.17□□□□□ -1.26
GPHN-204ENST00000543237 LETM1O95202 739 aaPredicted RBP7.17□□□□□ -1.26
GPHN-204ENST00000543237 SLC20A2Q08357 652 aa7.17□□□□□ -1.26
GPHN-204ENST00000543237 DISP3Q9P2K9 1392 aa7.16□□□□□ -1.26
GPHN-204ENST00000543237 KIF1BO60333 1816 aa7.16□□□□□ -1.26
GPHN-204ENST00000543237 TRPM2O94759 1503 aa7.16□□□□□ -1.26
GPHN-204ENST00000543237 NKTRP30414 1462 aaKnown RBP7.16□□□□□ -1.26
GPHN-204ENST00000543237 TMEM94Q12767 1356 aa7.16□□□□□ -1.26
GPHN-204ENST00000543237 APPP05067 770 aa7.16□□□□□ -1.26
GPHN-204ENST00000543237 PRDM10Q9NQV6 1147 aa7.16□□□□□ -1.26
GPHN-204ENST00000543237 ZHX1Q9UKY1 873 aaPredicted RBP7.16□□□□□ -1.26
GPHN-204ENST00000543237 TBX22Q9Y458 520 aa7.16□□□□□ -1.26
GPHN-204ENST00000543237 HSPA1LP34931 641 aa7.15□□□□□ -1.26
GPHN-204ENST00000543237 DNTTIP2Q5QJE6 756 aaKnown RBP7.15□□□□□ -1.26
GPHN-204ENST00000543237 DIP2AQ14689 1571 aa7.15□□□□□ -1.27
GPHN-204ENST00000543237 MSH6P52701 1360 aa7.15□□□□□ -1.27
GPHN-204ENST00000543237 CLTCL1P53675 1640 aa7.14□□□□□ -1.27
GPHN-204ENST00000543237 PATL2C9JE40 543 aaKnown RBP7.14□□□□□ -1.27
GPHN-204ENST00000543237 RBM33Q96EV2 1170 aaKnown RBP7.14□□□□□ -1.27
GPHN-204ENST00000543237 NWD1Q149M9 1564 aa7.14□□□□□ -1.27
GPHN-204ENST00000543237 CHD2O14647 1828 aaKnown RBP7.14□□□□□ -1.27
GPHN-204ENST00000543237 HSPA5P11021 654 aaKnown RBP7.13□□□□□ -1.27
GPHN-204ENST00000543237 ZNF692Q9BU19 519 aaPredicted RBP7.13□□□□□ -1.27
GPHN-204ENST00000543237 PIK3R4Q99570 1358 aa7.13□□□□□ -1.27
GPHN-204ENST00000543237 VGLL3A8MV65 326 aa7.13□□□□□ -1.27
GPHN-204ENST00000543237 XIRP1Q702N8 1843 aaKnown RBP7.13□□□□□ -1.27
GPHN-204ENST00000543237 PSEN1P49768 467 aa7.12□□□□□ -1.27
GPHN-204ENST00000543237 SETQ01105 290 aaPredicted RBP7.12□□□□□ -1.27
GPHN-204ENST00000543237 CFAP44Q96MT7 982 aa7.12□□□□□ -1.27
GPHN-204ENST00000543237 PUS7Q96PZ0 661 aaKnown RBP7.12□□□□□ -1.27
GPHN-204ENST00000543237 MPHOSPH9Q99550 1183 aa7.12□□□□□ -1.27
GPHN-204ENST00000543237 CCDC144AA2RUR9 1427 aa7.12□□□□□ -1.27
GPHN-204ENST00000543237 ADAMTS13Q76LX8 1427 aa7.12□□□□□ -1.27
GPHN-204ENST00000543237 CEP120Q8N960 986 aa7.12□□□□□ -1.27
GPHN-204ENST00000543237 ZNF592Q92610 1267 aa7.12□□□□□ -1.27
GPHN-204ENST00000543237 DNAJC2Q99543 621 aaKnown RBP7.12□□□□□ -1.27
GPHN-204ENST00000543237 YY1AP1Q9H869 796 aa7.12□□□□□ -1.27
GPHN-204ENST00000543237 EIF4G2P78344 907 aaKnown RBP eCLIP7.11□□□□□ -1.27
GPHN-204ENST00000543237 AMOTL2Q9Y2J4 779 aa7.11□□□□□ -1.27
GPHN-204ENST00000543237 ATF3P18847 181 aa7.11□□□□□ -1.27
GPHN-204ENST00000543237 RPGRIP1LQ68CZ1 1315 aa7.11□□□□□ -1.27
GPHN-204ENST00000543237 NEXMIFQ5QGS0 1516 aa7.11□□□□□ -1.27
GPHN-204ENST00000543237 SETBP1Q9Y6X0 1596 aa7.11□□□□□ -1.27
GPHN-204ENST00000543237 ALKQ9UM73 1620 aa7.11□□□□□ -1.27
GPHN-204ENST00000543237 NCOA3Q9Y6Q9 1424 aa7.1□□□□□ -1.27
GPHN-204ENST00000543237 ZSCAN20P17040 1043 aaPredicted RBP7.09□□□□□ -1.27
GPHN-204ENST00000543237 RGL3Q3MIN7 710 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 FAM135BQ49AJ0 1406 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 CCDC184Q52MB2 194 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 CC2D1BQ5T0F9 858 aaKnown RBP7.09□□□□□ -1.27
GPHN-204ENST00000543237 B4GALNT3Q6L9W6 998 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 ZBED9Q6R2W3 1325 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 CADPS2Q86UW7 1296 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 C19orf44Q9H6X5 657 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 SLAIN2Q9P270 581 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 TCERG1O14776 1098 aaKnown RBP7.09□□□□□ -1.27
GPHN-204ENST00000543237 IGSF3O75054 1194 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 FAM9BQ8IZU0 186 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 PSMD1Q99460 953 aa7.09□□□□□ -1.27
GPHN-204ENST00000543237 GEMIN8Q9NWZ8 242 aaKnown RBP7.09□□□□□ -1.27
GPHN-204ENST00000543237 ZBTB12Q9Y330 459 aaPredicted RBP7.09□□□□□ -1.27
GPHN-204ENST00000543237 ROBO1Q9Y6N7 1651 aa7.09□□□□□ -1.28
GPHN-204ENST00000543237 NRXN3Q9Y4C0 1643 aa7.09□□□□□ -1.28
GPHN-204ENST00000543237 PRKRIP1Q9H875 184 aaPredicted RBP7.08□□□□□ -1.28
GPHN-204ENST00000543237 MRS2Q9HD23 443 aa7.08□□□□□ -1.28
GPHN-204ENST00000543237 CCDC7Q96M83 1385 aa7.08□□□□□ -1.28
GPHN-204ENST00000543237 ESPNB1AK53 854 aa7.08□□□□□ -1.28
GPHN-204ENST00000543237 RALBP1Q15311 655 aa7.08□□□□□ -1.28
GPHN-204ENST00000543237 PTPRUQ92729 1446 aa7.08□□□□□ -1.28
GPHN-204ENST00000543237 PPLO60437 1756 aa7.08□□□□□ -1.28
GPHN-204ENST00000543237 METP08581 1390 aa7.07□□□□□ -1.28
GPHN-204ENST00000543237 MED1Q15648 1581 aaPredicted RBP7.07□□□□□ -1.28
GPHN-204ENST00000543237 MS4A1P11836 297 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms