RNA–Protein interactions for RNA: ENST00000543199.5

GPN3-203, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5 BASIC

Gene GPN3, Length 1,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-203ENST00000543199 DEFB132Q7Z7B7 95 aa18.7■□□□□ 0.58
GPN3-203ENST00000543199 PAK3O75914 559 aaPredicted RBP18.69■□□□□ 0.58
GPN3-203ENST00000543199 KRT27Q7Z3Y8 459 aa18.69■□□□□ 0.58
GPN3-203ENST00000543199 STAC3Q96MF2 364 aa18.69■□□□□ 0.58
GPN3-203ENST00000543199 ARHGEF28Q8N1W1 1705 aaKnown RBP18.69■□□□□ 0.58
GPN3-203ENST00000543199 ONECUT3O60422 494 aaPredicted RBP18.68■□□□□ 0.58
GPN3-203ENST00000543199 SF3B2Q13435 895 aaKnown RBP18.68■□□□□ 0.58
GPN3-203ENST00000543199 NRAPQ86VF7 1730 aa18.68■□□□□ 0.58
GPN3-203ENST00000543199 FAM98CQ17RN3 349 aaKnown RBP18.67■□□□□ 0.58
GPN3-203ENST00000543199 HRCP23327 699 aa18.67■□□□□ 0.58
GPN3-203ENST00000543199 ATP7BP35670 1465 aa18.66■□□□□ 0.58
GPN3-203ENST00000543199 COL14A1Q05707 1796 aaKnown RBP18.66■□□□□ 0.58
GPN3-203ENST00000543199 NUDT16Q96DE0 195 aaKnown RBP18.64■□□□□ 0.57
GPN3-203ENST00000543199 ITSN1Q15811 1721 aa18.64■□□□□ 0.57
GPN3-203ENST00000543199 PRDM11Q9NQV5 511 aa18.63■□□□□ 0.57
GPN3-203ENST00000543199 CRYBG1Q9Y4K1 1723 aa18.63■□□□□ 0.57
GPN3-203ENST00000543199 CDK19Q9BWU1 502 aa18.62■□□□□ 0.57
GPN3-203ENST00000543199 SPATA31A5Q5VU36 1347 aa18.6■□□□□ 0.57
GPN3-203ENST00000543199 SPATA31A7Q8IWB4 1347 aa18.6■□□□□ 0.57
GPN3-203ENST00000543199 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
GPN3-203ENST00000543199 KIAA0232Q92628 1395 aa18.6■□□□□ 0.57
GPN3-203ENST00000543199 FAM182BQ5T319 152 aa18.6■□□□□ 0.57
GPN3-203ENST00000543199 CHRNA2Q15822 529 aa18.59■□□□□ 0.57
GPN3-203ENST00000543199 PHRF1Q9P1Y6 1649 aaKnown RBP18.57■□□□□ 0.56
GPN3-203ENST00000543199 ACEP12821 1306 aa18.57■□□□□ 0.56
GPN3-203ENST00000543199 BAG6P46379 1132 aa18.57■□□□□ 0.56
GPN3-203ENST00000543199 NBPF1Q3BBV0 1214 aa18.57■□□□□ 0.56
GPN3-203ENST00000543199 STRN4Q9NRL3 753 aa18.57■□□□□ 0.56
GPN3-203ENST00000543199 TOPAZ1Q8N9V7 1692 aa18.57■□□□□ 0.56
GPN3-203ENST00000543199 POLR3AO14802 1390 aaPredicted RBP18.57■□□□□ 0.56
GPN3-203ENST00000543199 ZC3H6P61129 1189 aaKnown RBP18.56■□□□□ 0.56
GPN3-203ENST00000543199 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
GPN3-203ENST00000543199 KIAA1210Q9ULL0 1709 aa18.56■□□□□ 0.56
GPN3-203ENST00000543199 NBPF8Q3BBV2 869 aa18.56■□□□□ 0.56
GPN3-203ENST00000543199 THSD7AQ9UPZ6 1657 aa18.55■□□□□ 0.56
GPN3-203ENST00000543199 SPATA31A1Q5TZJ5 1347 aa18.54■□□□□ 0.56
GPN3-203ENST00000543199 PSDA5PKW4 1024 aaPredicted RBP18.53■□□□□ 0.56
GPN3-203ENST00000543199 EN1Q05925 392 aaPredicted RBP18.53■□□□□ 0.56
GPN3-203ENST00000543199 SRPK2P78362 688 aaKnown RBP18.52■□□□□ 0.56
GPN3-203ENST00000543199 ABTB2Q8N961 1025 aa18.52■□□□□ 0.56
GPN3-203ENST00000543199 USP35Q9P2H5 1018 aa18.52■□□□□ 0.56
GPN3-203ENST00000543199 PLEKHG3A1L390 1219 aa18.52■□□□□ 0.55
GPN3-203ENST00000543199 RGPD1P0DJD0 1748 aa18.51■□□□□ 0.55
GPN3-203ENST00000543199 MAPK8IP2Q13387 824 aaPredicted RBP18.51■□□□□ 0.55
GPN3-203ENST00000543199 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
GPN3-203ENST00000543199 CENPJQ9HC77 1338 aaPredicted RBP18.51■□□□□ 0.55
GPN3-203ENST00000543199 PPIP5K1Q6PFW1 1433 aa18.5■□□□□ 0.55
GPN3-203ENST00000543199 EVA1CP58658 441 aa18.49■□□□□ 0.55
GPN3-203ENST00000543199 CABP2Q9NPB3 220 aa18.49■□□□□ 0.55
GPN3-203ENST00000543199 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
GPN3-203ENST00000543199 TNS1Q9HBL0 1735 aaKnown RBP18.47■□□□□ 0.55
GPN3-203ENST00000543199 USP19O94966 1318 aa18.47■□□□□ 0.55
GPN3-203ENST00000543199 CAMTA1Q9Y6Y1 1673 aa18.47■□□□□ 0.55
GPN3-203ENST00000543199 LRP5O75197 1615 aa18.46■□□□□ 0.55
GPN3-203ENST00000543199 TRIM37O94972 964 aa18.46■□□□□ 0.55
GPN3-203ENST00000543199 LARP1Q6PKG0 1096 aaKnown RBP18.46■□□□□ 0.55
GPN3-203ENST00000543199 CPDO75976 1380 aa18.46■□□□□ 0.55
GPN3-203ENST00000543199 DISP2A7MBM2 1401 aa18.46■□□□□ 0.55
GPN3-203ENST00000543199 QRICH2Q9H0J4 1663 aa18.45■□□□□ 0.54
GPN3-203ENST00000543199 EZH2Q15910 746 aaKnown RBP18.45■□□□□ 0.54
GPN3-203ENST00000543199 FAM196AQ6ZSG2 479 aa18.45■□□□□ 0.54
GPN3-203ENST00000543199 NLRP13Q86W25 1043 aa18.45■□□□□ 0.54
GPN3-203ENST00000543199 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
GPN3-203ENST00000543199 GCP02774 474 aa18.44■□□□□ 0.54
GPN3-203ENST00000543199 R3HDM1Q15032 1099 aaKnown RBP18.44■□□□□ 0.54
GPN3-203ENST00000543199 BARGINQ6ZT62 677 aa18.44■□□□□ 0.54
GPN3-203ENST00000543199 L3MBTL2Q969R5 705 aa18.44■□□□□ 0.54
GPN3-203ENST00000543199 ZBTB7CA1YPR0 619 aa18.43■□□□□ 0.54
GPN3-203ENST00000543199 PDE3BQ13370 1112 aa18.43■□□□□ 0.54
GPN3-203ENST00000543199 CABP1Q9NZU7 370 aa18.43■□□□□ 0.54
GPN3-203ENST00000543199 TCP11L2Q8N4U5 519 aa18.42■□□□□ 0.54
GPN3-203ENST00000543199 USP6P35125 1406 aa18.41■□□□□ 0.54
GPN3-203ENST00000543199 APBA3O96018 575 aa18.41■□□□□ 0.54
GPN3-203ENST00000543199 COL5A2P05997 1499 aaPredicted RBP18.41■□□□□ 0.54
GPN3-203ENST00000543199 NLRP6P59044 892 aa18.4■□□□□ 0.54
GPN3-203ENST00000543199 CAMKK2Q96RR4 588 aa18.4■□□□□ 0.54
GPN3-203ENST00000543199 SIN3AQ96ST3 1273 aa18.4■□□□□ 0.54
GPN3-203ENST00000543199 BRD4O60885 1362 aaPredicted RBP18.39■□□□□ 0.53
GPN3-203ENST00000543199 EVC2Q86UK5 1308 aa18.38■□□□□ 0.53
GPN3-203ENST00000543199 THRAP3Q9Y2W1 955 aaKnown RBP18.38■□□□□ 0.53
GPN3-203ENST00000543199 TRPM1Q7Z4N2 1603 aa18.37■□□□□ 0.53
GPN3-203ENST00000543199 NEUROD1Q13562 356 aa18.37■□□□□ 0.53
GPN3-203ENST00000543199 CRB1P82279 1406 aa18.37■□□□□ 0.53
GPN3-203ENST00000543199 ROCK2O75116 1388 aaKnown RBP18.36■□□□□ 0.53
GPN3-203ENST00000543199 SLIT3O75094 1523 aa18.36■□□□□ 0.53
GPN3-203ENST00000543199 PARD3Q8TEW0 1356 aa18.35■□□□□ 0.53
GPN3-203ENST00000543199 PIK3C2AO00443 1686 aa18.35■□□□□ 0.53
GPN3-203ENST00000543199 AATKQ6ZMQ8 1374 aa18.34■□□□□ 0.53
GPN3-203ENST00000543199 PARP4Q9UKK3 1724 aaKnown RBP18.34■□□□□ 0.53
GPN3-203ENST00000543199 SOX12O15370 315 aa18.32■□□□□ 0.52
GPN3-203ENST00000543199 TOM1L2Q6ZVM7 507 aa18.32■□□□□ 0.52
GPN3-203ENST00000543199 RREB1Q92766 1687 aa18.32■□□□□ 0.52
GPN3-203ENST00000543199 AXIN2Q9Y2T1 843 aa18.31■□□□□ 0.52
GPN3-203ENST00000543199 NUP188Q5SRE5 1749 aa18.3■□□□□ 0.52
GPN3-203ENST00000543199 OVOS2A0A0G2JMS6 1433 aa18.3■□□□□ 0.52
GPN3-203ENST00000543199 OVOS2A0A0J9YW53 1432 aa18.3■□□□□ 0.52
GPN3-203ENST00000543199 OVOS2Q6IE36 1432 aa18.3■□□□□ 0.52
GPN3-203ENST00000543199 TTC21BQ7Z4L5 1316 aa18.3■□□□□ 0.52
GPN3-203ENST00000543199 LRRC37A3O60309 1634 aa18.3■□□□□ 0.52
GPN3-203ENST00000543199 CPSF1Q10570 1443 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms