RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
PTPN6-219ENST00000542848 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
PTPN6-219ENST00000542848 BTG4Q9NY30 223 aa17.28■□□□□ 0.36
PTPN6-219ENST00000542848 KRT27Q7Z3Y8 459 aa17.27■□□□□ 0.36
PTPN6-219ENST00000542848 NUDT16Q96DE0 195 aaKnown RBP17.27■□□□□ 0.36
PTPN6-219ENST00000542848 ATP7BP35670 1465 aa17.26■□□□□ 0.35
PTPN6-219ENST00000542848 PAK3O75914 559 aaPredicted RBP17.26■□□□□ 0.35
PTPN6-219ENST00000542848 SF3B2Q13435 895 aaKnown RBP17.26■□□□□ 0.35
PTPN6-219ENST00000542848 TOPAZ1Q8N9V7 1692 aa17.26■□□□□ 0.35
PTPN6-219ENST00000542848 CDK19Q9BWU1 502 aa17.24■□□□□ 0.35
PTPN6-219ENST00000542848 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
PTPN6-219ENST00000542848 FAM98CQ17RN3 349 aaKnown RBP17.23■□□□□ 0.35
PTPN6-219ENST00000542848 DEFB132Q7Z7B7 95 aa17.22■□□□□ 0.35
PTPN6-219ENST00000542848 SPATA31A5Q5VU36 1347 aa17.21■□□□□ 0.35
PTPN6-219ENST00000542848 SPATA31A7Q8IWB4 1347 aa17.21■□□□□ 0.35
PTPN6-219ENST00000542848 RGPD1P0DJD0 1748 aa17.21■□□□□ 0.35
PTPN6-219ENST00000542848 POLR3AO14802 1390 aaPredicted RBP17.21■□□□□ 0.35
PTPN6-219ENST00000542848 A0A0G2JS52 829 aa17.21■□□□□ 0.35
PTPN6-219ENST00000542848 MYT1Q01538 1121 aa17.21■□□□□ 0.35
PTPN6-219ENST00000542848 PRDM11Q9NQV5 511 aa17.21■□□□□ 0.35
PTPN6-219ENST00000542848 CCDC61Q9Y6R9 512 aa17.21■□□□□ 0.35
PTPN6-219ENST00000542848 THSD7AQ9UPZ6 1657 aa17.2■□□□□ 0.34
PTPN6-219ENST00000542848 PLEKHG3A1L390 1219 aa17.2■□□□□ 0.34
PTPN6-219ENST00000542848 NBPF8Q3BBV2 869 aa17.2■□□□□ 0.34
PTPN6-219ENST00000542848 ACEP12821 1306 aa17.2■□□□□ 0.34
PTPN6-219ENST00000542848 NBPF1Q3BBV0 1214 aa17.18■□□□□ 0.34
PTPN6-219ENST00000542848 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
PTPN6-219ENST00000542848 BAG6P46379 1132 aa17.17■□□□□ 0.34
PTPN6-219ENST00000542848 QRICH2Q9H0J4 1663 aa17.16■□□□□ 0.34
PTPN6-219ENST00000542848 SPATA31A1Q5TZJ5 1347 aa17.16■□□□□ 0.34
PTPN6-219ENST00000542848 ZC3H6P61129 1189 aaKnown RBP17.15■□□□□ 0.34
PTPN6-219ENST00000542848 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
PTPN6-219ENST00000542848 TNS1Q9HBL0 1735 aaKnown RBP17.15■□□□□ 0.34
PTPN6-219ENST00000542848 CHRNA2Q15822 529 aa17.14■□□□□ 0.33
PTPN6-219ENST00000542848 ABTB2Q8N961 1025 aa17.14■□□□□ 0.33
PTPN6-219ENST00000542848 CENPJQ9HC77 1338 aaPredicted RBP17.14■□□□□ 0.33
PTPN6-219ENST00000542848 NRKQ7Z2Y5 1582 aa17.13■□□□□ 0.33
PTPN6-219ENST00000542848 SRPK2P78362 688 aaKnown RBP17.12■□□□□ 0.33
PTPN6-219ENST00000542848 STRN4Q9NRL3 753 aa17.12■□□□□ 0.33
PTPN6-219ENST00000542848 BRD4O60885 1362 aaPredicted RBP17.12■□□□□ 0.33
PTPN6-219ENST00000542848 PPIP5K1Q6PFW1 1433 aa17.12■□□□□ 0.33
PTPN6-219ENST00000542848 LRP5O75197 1615 aa17.11■□□□□ 0.33
PTPN6-219ENST00000542848 LMO7Q8WWI1 1683 aa17.11■□□□□ 0.33
PTPN6-219ENST00000542848 EVA1CP58658 441 aa17.11■□□□□ 0.33
PTPN6-219ENST00000542848 FAM182BQ5T319 152 aa17.11■□□□□ 0.33
PTPN6-219ENST00000542848 NLRP13Q86W25 1043 aa17.11■□□□□ 0.33
PTPN6-219ENST00000542848 CPDO75976 1380 aa17.11■□□□□ 0.33
PTPN6-219ENST00000542848 CAMTA1Q9Y6Y1 1673 aa17.1■□□□□ 0.33
PTPN6-219ENST00000542848 USP19O94966 1318 aa17.1■□□□□ 0.33
PTPN6-219ENST00000542848 TRPM1Q7Z4N2 1603 aa17.1■□□□□ 0.33
PTPN6-219ENST00000542848 EN1Q05925 392 aaPredicted RBP17.09■□□□□ 0.33
PTPN6-219ENST00000542848 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
PTPN6-219ENST00000542848 BARGINQ6ZT62 677 aa17.09■□□□□ 0.33
PTPN6-219ENST00000542848 CABP2Q9NPB3 220 aa17.09■□□□□ 0.33
PTPN6-219ENST00000542848 DISP2A7MBM2 1401 aa17.09■□□□□ 0.33
PTPN6-219ENST00000542848 SSH2Q76I76 1423 aa17.09■□□□□ 0.33
PTPN6-219ENST00000542848 GCP02774 474 aa17.08■□□□□ 0.32
PTPN6-219ENST00000542848 L3MBTL2Q969R5 705 aa17.08■□□□□ 0.32
PTPN6-219ENST00000542848 CABP1Q9NZU7 370 aa17.06■□□□□ 0.32
PTPN6-219ENST00000542848 USP35Q9P2H5 1018 aa17.06■□□□□ 0.32
PTPN6-219ENST00000542848 AKAP12Q02952 1782 aa17.06■□□□□ 0.32
PTPN6-219ENST00000542848 PARP4Q9UKK3 1724 aaKnown RBP17.06■□□□□ 0.32
PTPN6-219ENST00000542848 PSDA5PKW4 1024 aaPredicted RBP17.05■□□□□ 0.32
PTPN6-219ENST00000542848 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
PTPN6-219ENST00000542848 LARP1Q6PKG0 1096 aaKnown RBP17.05■□□□□ 0.32
PTPN6-219ENST00000542848 TCP11L2Q8N4U5 519 aa17.05■□□□□ 0.32
PTPN6-219ENST00000542848 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
PTPN6-219ENST00000542848 USP6P35125 1406 aa17.04■□□□□ 0.32
PTPN6-219ENST00000542848 TRIM37O94972 964 aa17.04■□□□□ 0.32
PTPN6-219ENST00000542848 EVC2Q86UK5 1308 aa17.03■□□□□ 0.32
PTPN6-219ENST00000542848 COL18A1P39060 1754 aa17.03■□□□□ 0.32
PTPN6-219ENST00000542848 RGPD5Q99666 1765 aa17.03■□□□□ 0.32
PTPN6-219ENST00000542848 SBF2Q86WG5 1849 aa17.03■□□□□ 0.32
PTPN6-219ENST00000542848 SLIT3O75094 1523 aa17.02■□□□□ 0.32
PTPN6-219ENST00000542848 PIK3C2AO00443 1686 aa17.02■□□□□ 0.32
PTPN6-219ENST00000542848 RREB1Q92766 1687 aa17.02■□□□□ 0.32
PTPN6-219ENST00000542848 COL5A2P05997 1499 aaPredicted RBP17.02■□□□□ 0.32
PTPN6-219ENST00000542848 NLRP6P59044 892 aa17.02■□□□□ 0.32
PTPN6-219ENST00000542848 EZH2Q15910 746 aaKnown RBP17.02■□□□□ 0.32
PTPN6-219ENST00000542848 CAMKK2Q96RR4 588 aa17.02■□□□□ 0.32
PTPN6-219ENST00000542848 SIN3AQ96ST3 1273 aa17.02■□□□□ 0.32
PTPN6-219ENST00000542848 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.31
PTPN6-219ENST00000542848 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
PTPN6-219ENST00000542848 APBA3O96018 575 aa17■□□□□ 0.31
PTPN6-219ENST00000542848 CRB1P82279 1406 aa17■□□□□ 0.31
PTPN6-219ENST00000542848 WNK3Q9BYP7 1800 aa17■□□□□ 0.31
PTPN6-219ENST00000542848 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
PTPN6-219ENST00000542848 C11orf95C9JLR9 678 aaPredicted RBP16.99■□□□□ 0.31
PTPN6-219ENST00000542848 R3HDM1Q15032 1099 aaKnown RBP16.99■□□□□ 0.31
PTPN6-219ENST00000542848 ROCK2O75116 1388 aaKnown RBP16.99■□□□□ 0.31
PTPN6-219ENST00000542848 NUP188Q5SRE5 1749 aa16.99■□□□□ 0.31
PTPN6-219ENST00000542848 NEUROD1Q13562 356 aa16.98■□□□□ 0.31
PTPN6-219ENST00000542848 PEAK1Q9H792 1746 aa16.96■□□□□ 0.31
PTPN6-219ENST00000542848 ZBTB7CA1YPR0 619 aa16.96■□□□□ 0.31
PTPN6-219ENST00000542848 MON2Q7Z3U7 1717 aa16.96■□□□□ 0.3
PTPN6-219ENST00000542848 TTC21BQ7Z4L5 1316 aa16.96■□□□□ 0.3
PTPN6-219ENST00000542848 RGPD3A6NKT7 1758 aaPredicted RBP16.95■□□□□ 0.3
PTPN6-219ENST00000542848 RGPD4Q7Z3J3 1758 aa16.95■□□□□ 0.3
PTPN6-219ENST00000542848 KCNH5Q8NCM2 988 aa16.95■□□□□ 0.3
PTPN6-219ENST00000542848 LRRC37A3O60309 1634 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms