RNA–Protein interactions for RNA: ENST00000542766.5

IFT43-203, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-203ENST00000542766 PHRF1Q9P1Y6 1649 aaKnown RBP30.24■■■□□ 2.43
IFT43-203ENST00000542766 SEPT12Q8IYM1 358 aa30.23■■■□□ 2.43
IFT43-203ENST00000542766 ONECUT3O60422 494 aaPredicted RBP30.21■■■□□ 2.43
IFT43-203ENST00000542766 PAK3O75914 559 aaPredicted RBP30.21■■■□□ 2.43
IFT43-203ENST00000542766 CCDC9Q9Y3X0 531 aaKnown RBP30.21■■■□□ 2.43
IFT43-203ENST00000542766 BTG4Q9NY30 223 aa30.2■■■□□ 2.43
IFT43-203ENST00000542766 SRCAPQ6ZRS2 3230 aa30.19■■■□□ 2.42
IFT43-203ENST00000542766 QRICH2Q9H0J4 1663 aa30.18■■■□□ 2.42
IFT43-203ENST00000542766 CCDC125Q86Z20 511 aa30.17■■■□□ 2.42
IFT43-203ENST00000542766 POLR3AO14802 1390 aaPredicted RBP30.16■■■□□ 2.42
IFT43-203ENST00000542766 BLMP54132 1417 aaPredicted RBP30.14■■■□□ 2.42
IFT43-203ENST00000542766 ACEP12821 1306 aa30.14■■■□□ 2.42
IFT43-203ENST00000542766 CCDC61Q9Y6R9 512 aa30.13■■■□□ 2.41
IFT43-203ENST00000542766 TRPM1Q7Z4N2 1603 aa30.12■■■□□ 2.41
IFT43-203ENST00000542766 PLEKHG3A1L390 1219 aa30.11■■■□□ 2.41
IFT43-203ENST00000542766 FAM98CQ17RN3 349 aaKnown RBP30.11■■■□□ 2.41
IFT43-203ENST00000542766 NBPF8Q3BBV2 869 aa30.11■■■□□ 2.41
IFT43-203ENST00000542766 NUTM2GQ5VZR2 741 aa30.11■■■□□ 2.41
IFT43-203ENST00000542766 L3MBTL2Q969R5 705 aa30.11■■■□□ 2.41
IFT43-203ENST00000542766 SIN3AQ96ST3 1273 aa30.11■■■□□ 2.41
IFT43-203ENST00000542766 KRT27Q7Z3Y8 459 aa30.1■■■□□ 2.41
IFT43-203ENST00000542766 KIAA0232Q92628 1395 aa30.1■■■□□ 2.41
IFT43-203ENST00000542766 THSD7AQ9UPZ6 1657 aa30.1■■■□□ 2.41
IFT43-203ENST00000542766 NRKQ7Z2Y5 1582 aa30.09■■■□□ 2.41
IFT43-203ENST00000542766 DEFB132Q7Z7B7 95 aa30.09■■■□□ 2.41
IFT43-203ENST00000542766 CENPJQ9HC77 1338 aaPredicted RBP30.09■■■□□ 2.41
IFT43-203ENST00000542766 PRDM11Q9NQV5 511 aa30.09■■■□□ 2.41
IFT43-203ENST00000542766 SPATA31A5Q5VU36 1347 aa30.08■■■□□ 2.41
IFT43-203ENST00000542766 SPATA31A7Q8IWB4 1347 aa30.08■■■□□ 2.41
IFT43-203ENST00000542766 CHRNA2Q15822 529 aa30.07■■■□□ 2.4
IFT43-203ENST00000542766 CABP2Q9NPB3 220 aa30.06■■■□□ 2.4
IFT43-203ENST00000542766 PPIP5K1Q6PFW1 1433 aa30.05■■■□□ 2.4
IFT43-203ENST00000542766 A0A0G2JS52 829 aa30.05■■■□□ 2.4
IFT43-203ENST00000542766 MYT1Q01538 1121 aa30.05■■■□□ 2.4
IFT43-203ENST00000542766 ZRANB1Q9UGI0 708 aa30.05■■■□□ 2.4
IFT43-203ENST00000542766 ZC3H6P61129 1189 aaKnown RBP30.04■■■□□ 2.4
IFT43-203ENST00000542766 SRPK2P78362 688 aaKnown RBP30.03■■■□□ 2.4
IFT43-203ENST00000542766 LMO7Q8WWI1 1683 aa30.01■■■□□ 2.4
IFT43-203ENST00000542766 FAM182BQ5T319 152 aa30■■■□□ 2.39
IFT43-203ENST00000542766 CAMTA1Q9Y6Y1 1673 aa29.99■■■□□ 2.39
IFT43-203ENST00000542766 ABTB2Q8N961 1025 aa29.99■■■□□ 2.39
IFT43-203ENST00000542766 USP19O94966 1318 aa29.98■■■□□ 2.39
IFT43-203ENST00000542766 RGPD1P0DJD0 1748 aa29.98■■■□□ 2.39
IFT43-203ENST00000542766 SPATA31A1Q5TZJ5 1347 aa29.97■■■□□ 2.39
IFT43-203ENST00000542766 NEUROD1Q13562 356 aa29.97■■■□□ 2.39
IFT43-203ENST00000542766 STRN4Q9NRL3 753 aa29.97■■■□□ 2.39
IFT43-203ENST00000542766 TNS1Q9HBL0 1735 aaKnown RBP29.96■■■□□ 2.39
IFT43-203ENST00000542766 SF3B2Q13435 895 aaKnown RBP29.95■■■□□ 2.39
IFT43-203ENST00000542766 CABP1Q9NZU7 370 aa29.94■■■□□ 2.38
IFT43-203ENST00000542766 USP6P35125 1406 aa29.93■■■□□ 2.38
IFT43-203ENST00000542766 SSH2Q76I76 1423 aa29.93■■■□□ 2.38
IFT43-203ENST00000542766 CPDO75976 1380 aa29.92■■■□□ 2.38
IFT43-203ENST00000542766 PIK3C2AO00443 1686 aa29.92■■■□□ 2.38
IFT43-203ENST00000542766 AKAP12Q02952 1782 aa29.92■■■□□ 2.38
IFT43-203ENST00000542766 ROCK2O75116 1388 aaKnown RBP29.9■■■□□ 2.38
IFT43-203ENST00000542766 NLRP13Q86W25 1043 aa29.89■■■□□ 2.38
IFT43-203ENST00000542766 GCP02774 474 aa29.88■■■□□ 2.37
IFT43-203ENST00000542766 USP35Q9P2H5 1018 aa29.88■■■□□ 2.37
IFT43-203ENST00000542766 SLIT3O75094 1523 aa29.87■■■□□ 2.37
IFT43-203ENST00000542766 LARP1Q6PKG0 1096 aaKnown RBP29.87■■■□□ 2.37
IFT43-203ENST00000542766 BRD4O60885 1362 aaPredicted RBP29.87■■■□□ 2.37
IFT43-203ENST00000542766 COL18A1P39060 1754 aa29.86■■■□□ 2.37
IFT43-203ENST00000542766 EVC2Q86UK5 1308 aa29.85■■■□□ 2.37
IFT43-203ENST00000542766 BAG6P46379 1132 aa29.84■■■□□ 2.37
IFT43-203ENST00000542766 EVA1CP58658 441 aa29.84■■■□□ 2.37
IFT43-203ENST00000542766 RGPD5Q99666 1765 aa29.84■■■□□ 2.37
IFT43-203ENST00000542766 COL5A2P05997 1499 aaPredicted RBP29.83■■■□□ 2.37
IFT43-203ENST00000542766 EN1Q05925 392 aaPredicted RBP29.83■■■□□ 2.37
IFT43-203ENST00000542766 NLRP6P59044 892 aa29.81■■■□□ 2.36
IFT43-203ENST00000542766 BARGINQ6ZT62 677 aa29.81■■■□□ 2.36
IFT43-203ENST00000542766 PARP4Q9UKK3 1724 aaKnown RBP29.81■■■□□ 2.36
IFT43-203ENST00000542766 DISP2A7MBM2 1401 aa29.79■■■□□ 2.36
IFT43-203ENST00000542766 MON2Q7Z3U7 1717 aa29.78■■■□□ 2.36
IFT43-203ENST00000542766 PSDA5PKW4 1024 aaPredicted RBP29.77■■■□□ 2.36
IFT43-203ENST00000542766 TCP11L2Q8N4U5 519 aa29.77■■■□□ 2.36
IFT43-203ENST00000542766 WNK3Q9BYP7 1800 aa29.76■■■□□ 2.35
IFT43-203ENST00000542766 ZBTB7CA1YPR0 619 aa29.76■■■□□ 2.35
IFT43-203ENST00000542766 LRP5O75197 1615 aa29.75■■■□□ 2.35
IFT43-203ENST00000542766 TRIM37O94972 964 aa29.75■■■□□ 2.35
IFT43-203ENST00000542766 CPSF1Q10570 1443 aaKnown RBP29.75■■■□□ 2.35
IFT43-203ENST00000542766 TTC21BQ7Z4L5 1316 aa29.74■■■□□ 2.35
IFT43-203ENST00000542766 FAM196AQ6ZSG2 479 aa29.74■■■□□ 2.35
IFT43-203ENST00000542766 AATKQ6ZMQ8 1374 aa29.74■■■□□ 2.35
IFT43-203ENST00000542766 CRB1P82279 1406 aa29.72■■■□□ 2.35
IFT43-203ENST00000542766 EZH2Q15910 746 aaKnown RBP29.72■■■□□ 2.35
IFT43-203ENST00000542766 SBF2Q86WG5 1849 aa29.72■■■□□ 2.35
IFT43-203ENST00000542766 LRRC37A3O60309 1634 aa29.71■■■□□ 2.35
IFT43-203ENST00000542766 RREB1Q92766 1687 aa29.71■■■□□ 2.35
IFT43-203ENST00000542766 PEAK1Q9H792 1746 aa29.71■■■□□ 2.35
IFT43-203ENST00000542766 SBNO2Q9Y2G9 1366 aa29.7■■■□□ 2.35
IFT43-203ENST00000542766 AXIN2Q9Y2T1 843 aa29.7■■■□□ 2.35
IFT43-203ENST00000542766 THRAP3Q9Y2W1 955 aaKnown RBP29.7■■■□□ 2.35
IFT43-203ENST00000542766 PDE3BQ13370 1112 aa29.69■■■□□ 2.34
IFT43-203ENST00000542766 CAMKK2Q96RR4 588 aa29.69■■■□□ 2.34
IFT43-203ENST00000542766 ZNF692Q9BU19 519 aaPredicted RBP29.69■■■□□ 2.34
IFT43-203ENST00000542766 NFAT5O94916 1531 aa29.68■■■□□ 2.34
IFT43-203ENST00000542766 NUP188Q5SRE5 1749 aa29.68■■■□□ 2.34
IFT43-203ENST00000542766 CD163L1Q9NR16 1453 aa29.68■■■□□ 2.34
IFT43-203ENST00000542766 CARD11Q9BXL7 1154 aa29.67■■■□□ 2.34
IFT43-203ENST00000542766 USP54Q70EL1 1684 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms