RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 KIDINS220Q9ULH0 1771 aa12.94□□□□□ -0.34
CLPB-211ENST00000542555 HNRNPMP52272 730 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLPB-211ENST00000542555 CEP170BQ9Y4F5 1589 aaPredicted RBP12.93□□□□□ -0.34
CLPB-211ENST00000542555 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.92□□□□□ -0.34
CLPB-211ENST00000542555 CFDP1Q9UEE9 299 aaPredicted RBP12.92□□□□□ -0.34
CLPB-211ENST00000542555 MYO3AQ8NEV4 1616 aa12.91□□□□□ -0.34
CLPB-211ENST00000542555 A2MP01023 1474 aa12.91□□□□□ -0.34
CLPB-211ENST00000542555 TCOF1Q13428 1488 aaKnown RBP12.91□□□□□ -0.34
CLPB-211ENST00000542555 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
CLPB-211ENST00000542555 MED1Q15648 1581 aaPredicted RBP12.91□□□□□ -0.34
CLPB-211ENST00000542555 SAMD9LQ8IVG5 1584 aa12.91□□□□□ -0.34
CLPB-211ENST00000542555 PTPRKQ15262 1439 aa12.91□□□□□ -0.34
CLPB-211ENST00000542555 NECTIN2Q92692 538 aa12.91□□□□□ -0.34
CLPB-211ENST00000542555 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
CLPB-211ENST00000542555 CLTCQ00610 1675 aaKnown RBP12.91□□□□□ -0.34
CLPB-211ENST00000542555 CPS1P31327 1500 aa12.91□□□□□ -0.34
CLPB-211ENST00000542555 ZNF142P52746 1687 aaPredicted RBP12.9□□□□□ -0.34
CLPB-211ENST00000542555 ANKLE2Q86XL3 938 aa12.9□□□□□ -0.34
CLPB-211ENST00000542555 BBXQ8WY36 941 aaPredicted RBP12.9□□□□□ -0.34
CLPB-211ENST00000542555 LCE2BO14633 110 aa12.89□□□□□ -0.35
CLPB-211ENST00000542555 GGCXP38435 758 aa12.89□□□□□ -0.35
CLPB-211ENST00000542555 E2F4Q16254 413 aa12.89□□□□□ -0.35
CLPB-211ENST00000542555 NUDT18Q6ZVK8 323 aa12.89□□□□□ -0.35
CLPB-211ENST00000542555 ZNF516Q92618 1163 aa12.89□□□□□ -0.35
CLPB-211ENST00000542555 CASKIN1Q8WXD9 1431 aa12.88□□□□□ -0.35
CLPB-211ENST00000542555 ATP7AQ04656 1500 aa12.88□□□□□ -0.35
CLPB-211ENST00000542555 THEMISQ8N1K5 641 aaPredicted RBP12.88□□□□□ -0.35
CLPB-211ENST00000542555 A2ML1A8K2U0 1454 aa12.88□□□□□ -0.35
CLPB-211ENST00000542555 SYCP2Q9BX26 1530 aa12.88□□□□□ -0.35
CLPB-211ENST00000542555 SHANK2Q9UPX8 1470 aa12.87□□□□□ -0.35
CLPB-211ENST00000542555 CCNB3Q8WWL7 1395 aa12.87□□□□□ -0.35
CLPB-211ENST00000542555 WDR70Q9NW82 654 aa12.87□□□□□ -0.35
CLPB-211ENST00000542555 KIAA1107Q9UPP5 1409 aa12.87□□□□□ -0.35
CLPB-211ENST00000542555 CDC42BPAQ5VT25 1732 aa12.86□□□□□ -0.35
CLPB-211ENST00000542555 C3orf80F5H4A9 247 aa12.86□□□□□ -0.35
CLPB-211ENST00000542555 PDZRN3Q9UPQ7 1066 aa12.86□□□□□ -0.35
CLPB-211ENST00000542555 TNRQ92752 1358 aa12.85□□□□□ -0.35
CLPB-211ENST00000542555 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
CLPB-211ENST00000542555 APLP1P51693 650 aa12.85□□□□□ -0.35
CLPB-211ENST00000542555 LRRIQ1Q96JM4 1722 aa12.84□□□□□ -0.35
CLPB-211ENST00000542555 GPATCH8Q9UKJ3 1502 aaKnown RBP12.83□□□□□ -0.35
CLPB-211ENST00000542555 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
CLPB-211ENST00000542555 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
CLPB-211ENST00000542555 RBM27Q9P2N5 1060 aaKnown RBP12.83□□□□□ -0.36
CLPB-211ENST00000542555 WASHC2CQ9Y4E1 1318 aa12.83□□□□□ -0.36
CLPB-211ENST00000542555 MTUS2Q5JR59 1369 aa12.82□□□□□ -0.36
CLPB-211ENST00000542555 DNMT1P26358 1616 aaKnown RBP12.82□□□□□ -0.36
CLPB-211ENST00000542555 KIF3BO15066 747 aa12.82□□□□□ -0.36
CLPB-211ENST00000542555 COPS2P61201 443 aa12.82□□□□□ -0.36
CLPB-211ENST00000542555 ZNF787Q6DD87 383 aa12.82□□□□□ -0.36
CLPB-211ENST00000542555 SLF2Q8IX21 1173 aa12.82□□□□□ -0.36
CLPB-211ENST00000542555 FYCO1Q9BQS8 1478 aa12.82□□□□□ -0.36
CLPB-211ENST00000542555 ADGBQ8N7X0 1667 aa12.82□□□□□ -0.36
CLPB-211ENST00000542555 PLXNC1O60486 1568 aa12.81□□□□□ -0.36
CLPB-211ENST00000542555 NKX2-3Q8TAU0 364 aa12.81□□□□□ -0.36
CLPB-211ENST00000542555 CDHR5Q9HBB8 845 aa12.81□□□□□ -0.36
CLPB-211ENST00000542555 POLR1AO95602 1720 aaPredicted RBP12.81□□□□□ -0.36
CLPB-211ENST00000542555 FAM135AQ9P2D6 1515 aa12.81□□□□□ -0.36
CLPB-211ENST00000542555 INO80Q9ULG1 1556 aaPredicted RBP12.81□□□□□ -0.36
CLPB-211ENST00000542555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
CLPB-211ENST00000542555 NPHP4O75161 1426 aaPredicted RBP12.79□□□□□ -0.36
CLPB-211ENST00000542555 FBXO31Q5XUX0 539 aaPredicted RBP12.79□□□□□ -0.36
CLPB-211ENST00000542555 ARIH1Q9Y4X5 557 aaPredicted RBP12.79□□□□□ -0.36
CLPB-211ENST00000542555 DHX29Q7Z478 1369 aaKnown RBP12.79□□□□□ -0.36
CLPB-211ENST00000542555 OSBPP22059 807 aa12.78□□□□□ -0.36
CLPB-211ENST00000542555 SWT1Q5T5J6 900 aaKnown RBP12.78□□□□□ -0.36
CLPB-211ENST00000542555 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
CLPB-211ENST00000542555 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
CLPB-211ENST00000542555 RTEL1-TNFRSF6BF6WH68 1400 aa12.78□□□□□ -0.36
CLPB-211ENST00000542555 TMUB1Q9BVT8 246 aa12.77□□□□□ -0.37
CLPB-211ENST00000542555 NLRP1Q9C000 1473 aa12.77□□□□□ -0.37
CLPB-211ENST00000542555 MIA2Q96PC5 1412 aa12.76□□□□□ -0.37
CLPB-211ENST00000542555 PZPP20742 1482 aa12.76□□□□□ -0.37
CLPB-211ENST00000542555 KDM5DQ9BY66 1539 aa12.76□□□□□ -0.37
CLPB-211ENST00000542555 UGGT1Q9NYU2 1555 aa12.76□□□□□ -0.37
CLPB-211ENST00000542555 PRR14Q9BWN1 585 aa12.75□□□□□ -0.37
CLPB-211ENST00000542555 NEURL4Q96JN8 1562 aa12.74□□□□□ -0.37
CLPB-211ENST00000542555 TSPY4P0CV99 314 aa12.74□□□□□ -0.37
CLPB-211ENST00000542555 TSPY10P0CW01 314 aa12.74□□□□□ -0.37
CLPB-211ENST00000542555 MED14O60244 1454 aa12.73□□□□□ -0.37
CLPB-211ENST00000542555 ZNF644Q9H582 1327 aaPredicted RBP12.73□□□□□ -0.37
CLPB-211ENST00000542555 PADI6Q6TGC4 694 aa12.73□□□□□ -0.37
CLPB-211ENST00000542555 DEPDC5O75140 1603 aa12.73□□□□□ -0.37
CLPB-211ENST00000542555 VWDEQ8N2E2 1590 aa12.73□□□□□ -0.37
CLPB-211ENST00000542555 ZPR1O75312 459 aa12.72□□□□□ -0.37
CLPB-211ENST00000542555 RNF17Q9BXT8 1623 aaKnown RBP12.7□□□□□ -0.38
CLPB-211ENST00000542555 PCDHB3Q9Y5E6 796 aa12.7□□□□□ -0.38
CLPB-211ENST00000542555 EID1Q9Y6B2 187 aa12.7□□□□□ -0.38
CLPB-211ENST00000542555 LRRC7Q96NW7 1537 aa12.7□□□□□ -0.38
CLPB-211ENST00000542555 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
CLPB-211ENST00000542555 SYNMO15061 1565 aa12.69□□□□□ -0.38
CLPB-211ENST00000542555 TTC13Q8NBP0 860 aa12.69□□□□□ -0.38
CLPB-211ENST00000542555 CCDC141Q6ZP82 1450 aa12.69□□□□□ -0.38
CLPB-211ENST00000542555 MBD5Q9P267 1494 aa12.69□□□□□ -0.38
CLPB-211ENST00000542555 SLC19A1P41440 591 aa12.67□□□□□ -0.38
CLPB-211ENST00000542555 TXNDC2Q86VQ3 553 aa12.67□□□□□ -0.38
CLPB-211ENST00000542555 EHBP1L1Q8N3D4 1523 aa12.67□□□□□ -0.38
CLPB-211ENST00000542555 PKDCCQ504Y2 493 aa12.66□□□□□ -0.38
CLPB-211ENST00000542555 CFAP44Q96MT7 982 aa12.66□□□□□ -0.38
CLPB-211ENST00000542555 NPDC1Q9NQX5 325 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms