RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 MRGPRX2Q96LB1 330 aa9.04□□□□□ -0.96
C12orf56-205ENST00000542397 SKOR1P84550 965 aa9.03□□□□□ -0.96
C12orf56-205ENST00000542397 SNIP1Q8TAD8 396 aaKnown RBP9.03□□□□□ -0.96
C12orf56-205ENST00000542397 ZBTB3Q9H5J0 574 aa9.03□□□□□ -0.96
C12orf56-205ENST00000542397 EVA1BQ9NVM1 165 aa9.03□□□□□ -0.96
C12orf56-205ENST00000542397 AVPP01185 164 aa9.02□□□□□ -0.97
C12orf56-205ENST00000542397 HRCP23327 699 aa9.02□□□□□ -0.97
C12orf56-205ENST00000542397 RC3H1Q5TC82 1133 aaKnown RBP9.02□□□□□ -0.97
C12orf56-205ENST00000542397 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
C12orf56-205ENST00000542397 MYSM1Q5VVJ2 828 aa9.02□□□□□ -0.97
C12orf56-205ENST00000542397 POTECB2RU33 542 aa9.01□□□□□ -0.97
C12orf56-205ENST00000542397 INSM1Q01101 510 aaPredicted RBP9.01□□□□□ -0.97
C12orf56-205ENST00000542397 AAASQ9NRG9 546 aa9.01□□□□□ -0.97
C12orf56-205ENST00000542397 LAMC3Q9Y6N6 1575 aa9□□□□□ -0.97
C12orf56-205ENST00000542397 CFAP99D6REC4 459 aa9□□□□□ -0.97
C12orf56-205ENST00000542397 ST8SIA5O15466 376 aa9□□□□□ -0.97
C12orf56-205ENST00000542397 KCNH2Q12809 1159 aa9□□□□□ -0.97
C12orf56-205ENST00000542397 CRIPAKQ8N1N5 446 aa9□□□□□ -0.97
C12orf56-205ENST00000542397 LIMD1Q9UGP4 676 aa9□□□□□ -0.97
C12orf56-205ENST00000542397 HMGXB3Q12766 1538 aa9□□□□□ -0.97
C12orf56-205ENST00000542397 SMPD1P17405 629 aa8.99□□□□□ -0.97
C12orf56-205ENST00000542397 CSPP1Q1MSJ5 1256 aa8.99□□□□□ -0.97
C12orf56-205ENST00000542397 TUSC1Q2TAM9 212 aa8.99□□□□□ -0.97
C12orf56-205ENST00000542397 LYPD8Q6UX82 237 aa8.99□□□□□ -0.97
C12orf56-205ENST00000542397 CABLES1Q8TDN4 633 aa8.99□□□□□ -0.97
C12orf56-205ENST00000542397 UNC93B1Q9H1C4 597 aa8.99□□□□□ -0.97
C12orf56-205ENST00000542397 J3QL48 77 aa8.97□□□□□ -0.97
C12orf56-205ENST00000542397 SH3BP2P78314 561 aa8.97□□□□□ -0.97
C12orf56-205ENST00000542397 CTC1Q2NKJ3 1217 aa8.97□□□□□ -0.97
C12orf56-205ENST00000542397 RSPH6AQ9H0K4 717 aa8.97□□□□□ -0.97
C12orf56-205ENST00000542397 MRC2Q9UBG0 1479 aa8.96□□□□□ -0.97
C12orf56-205ENST00000542397 ARHGEF11O15085 1522 aa8.96□□□□□ -0.97
C12orf56-205ENST00000542397 AXIN1O15169 862 aa8.96□□□□□ -0.98
C12orf56-205ENST00000542397 SMCPP49901 116 aaPredicted RBP8.96□□□□□ -0.98
C12orf56-205ENST00000542397 QPCTQ16769 361 aa8.96□□□□□ -0.98
C12orf56-205ENST00000542397 EHBP1Q8NDI1 1231 aa8.96□□□□□ -0.98
C12orf56-205ENST00000542397 BAZ1BQ9UIG0 1483 aaKnown RBP8.96□□□□□ -0.98
C12orf56-205ENST00000542397 WDR62O43379 1518 aa8.95□□□□□ -0.98
C12orf56-205ENST00000542397 SMARCA4P51532 1647 aa8.95□□□□□ -0.98
C12orf56-205ENST00000542397 NUTM2BA6NNL0 878 aaPredicted RBP8.95□□□□□ -0.98
C12orf56-205ENST00000542397 NUTM2EB1AL46 878 aaPredicted RBP8.95□□□□□ -0.98
C12orf56-205ENST00000542397 WIPF1O43516 503 aa8.95□□□□□ -0.98
C12orf56-205ENST00000542397 LILRB3O75022 631 aa8.95□□□□□ -0.98
C12orf56-205ENST00000542397 WFS1O76024 890 aa8.95□□□□□ -0.98
C12orf56-205ENST00000542397 CTHP32929 405 aa8.95□□□□□ -0.98
C12orf56-205ENST00000542397 CLK2P49760 499 aaKnown RBP8.95□□□□□ -0.98
C12orf56-205ENST00000542397 NUTM2DQ5VT03 806 aaPredicted RBP8.95□□□□□ -0.98
C12orf56-205ENST00000542397 NUTM2AQ8IVF1 878 aaPredicted RBP8.95□□□□□ -0.98
C12orf56-205ENST00000542397 BAP1Q92560 729 aa8.95□□□□□ -0.98
C12orf56-205ENST00000542397 SIAH2O43255 324 aa8.94□□□□□ -0.98
C12orf56-205ENST00000542397 LINC01559Q495D7 138 aa8.94□□□□□ -0.98
C12orf56-205ENST00000542397 ALDH1A1P00352 501 aa8.93□□□□□ -0.98
C12orf56-205ENST00000542397 F12P00748 615 aaPredicted RBP8.93□□□□□ -0.98
C12orf56-205ENST00000542397 ZNF511Q8NB15 262 aa8.93□□□□□ -0.98
C12orf56-205ENST00000542397 KDM4CQ9H3R0 1056 aa8.93□□□□□ -0.98
C12orf56-205ENST00000542397 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
C12orf56-205ENST00000542397 POLR3EQ9NVU0 708 aa8.93□□□□□ -0.98
C12orf56-205ENST00000542397 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
C12orf56-205ENST00000542397 PDS5BQ9NTI5 1447 aa8.93□□□□□ -0.98
C12orf56-205ENST00000542397 SUZ12Q15022 739 aaKnown RBP8.92□□□□□ -0.98
C12orf56-205ENST00000542397 CYB5RLQ6IPT4 315 aa8.92□□□□□ -0.98
C12orf56-205ENST00000542397 TSC1Q92574 1164 aa8.92□□□□□ -0.98
C12orf56-205ENST00000542397 HPS1Q92902 700 aa8.92□□□□□ -0.98
C12orf56-205ENST00000542397 MAP10Q9P2G4 905 aa8.92□□□□□ -0.98
C12orf56-205ENST00000542397 PER1O15534 1290 aaPredicted RBP8.91□□□□□ -0.98
C12orf56-205ENST00000542397 NEUROD2Q15784 382 aa8.91□□□□□ -0.98
C12orf56-205ENST00000542397 RTL5Q5HYW3 569 aaPredicted RBP8.91□□□□□ -0.98
C12orf56-205ENST00000542397 HELBQ8NG08 1087 aaPredicted RBP8.9□□□□□ -0.98
C12orf56-205ENST00000542397 DDRGK1Q96HY6 314 aa8.9□□□□□ -0.98
C12orf56-205ENST00000542397 ARXQ96QS3 562 aa8.9□□□□□ -0.98
C12orf56-205ENST00000542397 FAM117AQ9C073 453 aa8.9□□□□□ -0.98
C12orf56-205ENST00000542397 VARSP26640 1264 aaKnown RBP8.89□□□□□ -0.99
C12orf56-205ENST00000542397 SKIV2LQ15477 1246 aaKnown RBP8.88□□□□□ -0.99
C12orf56-205ENST00000542397 SH3D19Q5HYK7 790 aa8.88□□□□□ -0.99
C12orf56-205ENST00000542397 C14orf37Q86TY3 774 aa8.88□□□□□ -0.99
C12orf56-205ENST00000542397 GMPR2Q9P2T1 348 aaKnown RBP8.88□□□□□ -0.99
C12orf56-205ENST00000542397 WASF2Q9Y6W5 498 aa8.88□□□□□ -0.99
C12orf56-205ENST00000542397 ARAP1Q96P48 1450 aa8.86□□□□□ -0.99
C12orf56-205ENST00000542397 MPNDQ8N594 471 aa8.86□□□□□ -0.99
C12orf56-205ENST00000542397 ATP13A2Q9NQ11 1180 aa8.86□□□□□ -0.99
C12orf56-205ENST00000542397 PLEKHG3A1L390 1219 aa8.85□□□□□ -0.99
C12orf56-205ENST00000542397 FOXJ1Q92949 421 aa8.85□□□□□ -0.99
C12orf56-205ENST00000542397 TLL2Q9Y6L7 1015 aa8.85□□□□□ -0.99
C12orf56-205ENST00000542397 C11orf95C9JLR9 678 aaPredicted RBP8.84□□□□□ -0.99
C12orf56-205ENST00000542397 PROCA1Q8NCQ7 364 aaPredicted RBP8.84□□□□□ -0.99
C12orf56-205ENST00000542397 ARMC2Q8NEN0 867 aa8.84□□□□□ -0.99
C12orf56-205ENST00000542397 FAM174AQ8TBP5 190 aa8.84□□□□□ -0.99
C12orf56-205ENST00000542397 CTDSPL2Q05D32 466 aa8.83□□□□□ -1
C12orf56-205ENST00000542397 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.83□□□□□ -1
C12orf56-205ENST00000542397 ATP1B4Q9UN42 357 aaPredicted RBP8.83□□□□□ -1
C12orf56-205ENST00000542397 CEP164Q9UPV0 1460 aa8.83□□□□□ -1
C12orf56-205ENST00000542397 BPHLQ86WA6 291 aaPredicted RBP8.82□□□□□ -1
C12orf56-205ENST00000542397 FAM181BA6NEQ2 426 aa8.81□□□□□ -1
C12orf56-205ENST00000542397 NFX1Q12986 1120 aaKnown RBP8.81□□□□□ -1
C12orf56-205ENST00000542397 AGERQ15109 404 aa8.81□□□□□ -1
C12orf56-205ENST00000542397 C4orf48Q5BLP8 95 aa8.81□□□□□ -1
C12orf56-205ENST00000542397 FBXO31Q5XUX0 539 aaPredicted RBP8.81□□□□□ -1
C12orf56-205ENST00000542397 PPP2R2DQ66LE6 453 aa8.81□□□□□ -1
C12orf56-205ENST00000542397 SENP2Q9HC62 589 aa8.81□□□□□ -1
C12orf56-205ENST00000542397 CAPN5O15484 640 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms