RNA–Protein interactions for RNA: ENST00000542362.1

POLE-218, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 4

Gene POLE, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-218	ENST00000542362	KIF20B	Q96Q89	1820 aa		12.93	□□□□□ -0.34
POLE-218	ENST00000542362	ST20-MTHFS	A0A0A6YYL1	179 aa		12.93	□□□□□ -0.34
POLE-218	ENST00000542362	NUTM2G	Q5VZR2	741 aa		12.93	□□□□□ -0.34
POLE-218	ENST00000542362	NGDN	Q8NEJ9	315 aa	Known RBP	12.93	□□□□□ -0.34
POLE-218	ENST00000542362	C8orf37	Q96NL8	207 aa		12.93	□□□□□ -0.34
POLE-218	ENST00000542362	AFF2	P51816	1311 aa		12.92	□□□□□ -0.34
POLE-218	ENST00000542362	PSME1	Q06323	249 aa		12.92	□□□□□ -0.34
POLE-218	ENST00000542362	TESK2	Q96S53	571 aa		12.92	□□□□□ -0.34
POLE-218	ENST00000542362	USP54	Q70EL1	1684 aa		12.92	□□□□□ -0.34
POLE-218	ENST00000542362	SBNO1	A3KN83	1393 aa		12.92	□□□□□ -0.34
POLE-218	ENST00000542362	SBNO2	Q9Y2G9	1366 aa		12.92	□□□□□ -0.34
POLE-218	ENST00000542362	CABP1	Q9NZU7	370 aa		12.91	□□□□□ -0.34
POLE-218	ENST00000542362	COL14A1	Q05707	1796 aa	Known RBP	12.91	□□□□□ -0.34
POLE-218	ENST00000542362	EVC2	Q86UK5	1308 aa		12.9	□□□□□ -0.34
POLE-218	ENST00000542362	GLI3	P10071	1580 aa		12.9	□□□□□ -0.34
POLE-218	ENST00000542362	USP6	P35125	1406 aa		12.9	□□□□□ -0.34
POLE-218	ENST00000542362	PAK3	O75914	559 aa	Predicted RBP	12.9	□□□□□ -0.34
POLE-218	ENST00000542362	CCDC61	Q9Y6R9	512 aa		12.9	□□□□□ -0.34
POLE-218	ENST00000542362	COL18A1	P39060	1754 aa		12.89	□□□□□ -0.35
POLE-218	ENST00000542362	LMO7	Q8WWI1	1683 aa		12.89	□□□□□ -0.35
POLE-218	ENST00000542362	WNK3	Q9BYP7	1800 aa		12.88	□□□□□ -0.35
POLE-218	ENST00000542362	PLEKHG3	A1L390	1219 aa		12.88	□□□□□ -0.35
POLE-218	ENST00000542362	RGPD2	P0DJD1	1756 aa		12.88	□□□□□ -0.35
POLE-218	ENST00000542362	SSH2	Q76I76	1423 aa		12.88	□□□□□ -0.35
POLE-218	ENST00000542362	UPF1	Q92900	1129 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
POLE-218	ENST00000542362	SRCAP	Q6ZRS2	3230 aa		12.87	□□□□□ -0.35
POLE-218	ENST00000542362	SLIT2	O94813	1529 aa		12.87	□□□□□ -0.35
POLE-218	ENST00000542362	CPSF1	Q10570	1443 aa	Known RBP	12.87	□□□□□ -0.35
POLE-218	ENST00000542362	BCL9L	Q86UU0	1499 aa		12.86	□□□□□ -0.35
POLE-218	ENST00000542362	ARHGEF10	O15013	1369 aa		12.86	□□□□□ -0.35
POLE-218	ENST00000542362	ZRANB1	Q9UGI0	708 aa		12.86	□□□□□ -0.35
POLE-218	ENST00000542362	SLIT3	O75094	1523 aa		12.86	□□□□□ -0.35
POLE-218	ENST00000542362		A0A1W2PP64	1363 aa		12.85	□□□□□ -0.35
POLE-218	ENST00000542362	NGLY1	Q96IV0	654 aa		12.85	□□□□□ -0.35
POLE-218	ENST00000542362	SLC12A5	Q9H2X9	1139 aa		12.85	□□□□□ -0.35
POLE-218	ENST00000542362	ATAD2	Q6PL18	1390 aa		12.84	□□□□□ -0.35
POLE-218	ENST00000542362	RGS12	O14924	1447 aa		12.84	□□□□□ -0.35
POLE-218	ENST00000542362	ANKRD26	Q9UPS8	1709 aa		12.84	□□□□□ -0.35
POLE-218	ENST00000542362	ATRN	O75882	1429 aa		12.83	□□□□□ -0.36
POLE-218	ENST00000542362	HSPA5	P11021	654 aa	Known RBP	12.83	□□□□□ -0.36
POLE-218	ENST00000542362	TMC1	Q8TDI8	760 aa		12.83	□□□□□ -0.36
POLE-218	ENST00000542362	TIMELESS	Q9UNS1	1208 aa		12.83	□□□□□ -0.36
POLE-218	ENST00000542362	NFAT5	O94916	1531 aa		12.83	□□□□□ -0.36
POLE-218	ENST00000542362	KTN1	Q86UP2	1357 aa	Known RBP	12.82	□□□□□ -0.36
POLE-218	ENST00000542362	HAP1	P54257	671 aa	Predicted RBP	12.82	□□□□□ -0.36
POLE-218	ENST00000542362	CHRNA2	Q15822	529 aa		12.82	□□□□□ -0.36
POLE-218	ENST00000542362	USP21	Q9UK80	565 aa		12.82	□□□□□ -0.36
POLE-218	ENST00000542362	CAMTA1	Q9Y6Y1	1673 aa		12.82	□□□□□ -0.36
POLE-218	ENST00000542362	KIAA0232	Q92628	1395 aa		12.81	□□□□□ -0.36
POLE-218	ENST00000542362	MAP2	P11137	1827 aa	Known RBP	12.81	□□□□□ -0.36
POLE-218	ENST00000542362	FAM83G	A6ND36	823 aa		12.81	□□□□□ -0.36
POLE-218	ENST00000542362	ZC3H6	P61129	1189 aa	Known RBP	12.81	□□□□□ -0.36
POLE-218	ENST00000542362	ABTB2	Q8N961	1025 aa		12.81	□□□□□ -0.36
POLE-218	ENST00000542362	USP19	O94966	1318 aa		12.81	□□□□□ -0.36
POLE-218	ENST00000542362	TTC21B	Q7Z4L5	1316 aa		12.81	□□□□□ -0.36
POLE-218	ENST00000542362	SOX12	O15370	315 aa		12.8	□□□□□ -0.36
POLE-218	ENST00000542362	NME9	Q86XW9	330 aa		12.8	□□□□□ -0.36
POLE-218	ENST00000542362	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
POLE-218	ENST00000542362	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.8	□□□□□ -0.36
POLE-218	ENST00000542362	QTRT2	Q9H974	415 aa	Known RBP	12.8	□□□□□ -0.36
POLE-218	ENST00000542362	C11orf95	C9JLR9	678 aa	Predicted RBP	12.79	□□□□□ -0.36
POLE-218	ENST00000542362	ZNF772	Q68DY9	489 aa	Predicted RBP	12.79	□□□□□ -0.36
POLE-218	ENST00000542362	PEAK1	Q9H792	1746 aa		12.79	□□□□□ -0.36
POLE-218	ENST00000542362	EP400	Q96L91	3159 aa		12.78	□□□□□ -0.36
POLE-218	ENST00000542362	THSD7A	Q9UPZ6	1657 aa		12.78	□□□□□ -0.36
POLE-218	ENST00000542362	ZBTB7C	A1YPR0	619 aa		12.78	□□□□□ -0.36
POLE-218	ENST00000542362	POLR3GL	Q9BT43	218 aa		12.78	□□□□□ -0.36
POLE-218	ENST00000542362	NLRP6	P59044	892 aa		12.77	□□□□□ -0.37
POLE-218	ENST00000542362	TMF1	P82094	1093 aa		12.77	□□□□□ -0.37
POLE-218	ENST00000542362	OVOS2	A0A0J9YW53	1432 aa		12.77	□□□□□ -0.37
POLE-218	ENST00000542362	OVOS2	Q6IE36	1432 aa		12.77	□□□□□ -0.37
POLE-218	ENST00000542362	EDC4	Q6P2E9	1401 aa	Known RBP	12.77	□□□□□ -0.37
POLE-218	ENST00000542362	CDK12	Q9NYV4	1490 aa	Predicted RBP	12.77	□□□□□ -0.37
POLE-218	ENST00000542362	FBLN1	P23142	703 aa		12.76	□□□□□ -0.37
POLE-218	ENST00000542362	BTG4	Q9NY30	223 aa		12.76	□□□□□ -0.37
POLE-218	ENST00000542362	RXRB	P28702	533 aa		12.75	□□□□□ -0.37
POLE-218	ENST00000542362	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
POLE-218	ENST00000542362	UNC5CL	Q8IV45	518 aa		12.75	□□□□□ -0.37
POLE-218	ENST00000542362	ANKRD36B	Q8N2N9	1353 aa		12.75	□□□□□ -0.37
POLE-218	ENST00000542362	PRDM11	Q9NQV5	511 aa		12.75	□□□□□ -0.37
POLE-218	ENST00000542362	LRRC37A3	O60309	1634 aa		12.74	□□□□□ -0.37
POLE-218	ENST00000542362	COL5A2	P05997	1499 aa	Predicted RBP	12.74	□□□□□ -0.37
POLE-218	ENST00000542362	GC	P02774	474 aa		12.74	□□□□□ -0.37
POLE-218	ENST00000542362	NSD3	Q9BZ95	1437 aa		12.73	□□□□□ -0.37
POLE-218	ENST00000542362	NLRP13	Q86W25	1043 aa		12.73	□□□□□ -0.37
POLE-218	ENST00000542362	TRPC5	Q9UL62	973 aa	Predicted RBP	12.73	□□□□□ -0.37
POLE-218	ENST00000542362	SBF2	Q86WG5	1849 aa		12.73	□□□□□ -0.37
POLE-218	ENST00000542362	PARP4	Q9UKK3	1724 aa	Known RBP	12.73	□□□□□ -0.37
POLE-218	ENST00000542362	BRD4	O60885	1362 aa	Predicted RBP	12.72	□□□□□ -0.37
POLE-218	ENST00000542362	TTC21A	Q8NDW8	1320 aa		12.72	□□□□□ -0.37
POLE-218	ENST00000542362	SHANK3	Q9BYB0	1731 aa		12.72	□□□□□ -0.37
POLE-218	ENST00000542362	RBM6	P78332	1123 aa	Known RBP	12.72	□□□□□ -0.37
POLE-218	ENST00000542362	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.72	□□□□□ -0.37
POLE-218	ENST00000542362	ZNF692	Q9BU19	519 aa	Predicted RBP	12.72	□□□□□ -0.37
POLE-218	ENST00000542362	CARD14	Q9BXL6	1004 aa		12.72	□□□□□ -0.37
POLE-218	ENST00000542362	STRN4	Q9NRL3	753 aa		12.72	□□□□□ -0.37
POLE-218	ENST00000542362	TNS1	Q9HBL0	1735 aa	Known RBP	12.71	□□□□□ -0.37
POLE-218	ENST00000542362	CPD	O75976	1380 aa		12.71	□□□□□ -0.37
POLE-218	ENST00000542362	USP31	Q70CQ4	1352 aa		12.71	□□□□□ -0.37
POLE-218	ENST00000542362	FAM208A	Q9UK61	1670 aa	Known RBP	12.71	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms