RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 TOPAZ1Q8N9V7 1692 aa22.4■■□□□ 1.18
SCNN1A-217ENST00000542260 FAM83GA6ND36 823 aa22.4■■□□□ 1.18
SCNN1A-217ENST00000542260 PAK3O75914 559 aaPredicted RBP22.4■■□□□ 1.18
SCNN1A-217ENST00000542260 ONECUT3O60422 494 aaPredicted RBP22.38■■□□□ 1.17
SCNN1A-217ENST00000542260 SF3B2Q13435 895 aaKnown RBP22.38■■□□□ 1.17
SCNN1A-217ENST00000542260 NUDT16Q96DE0 195 aaKnown RBP22.38■■□□□ 1.17
SCNN1A-217ENST00000542260 BTG4Q9NY30 223 aa22.38■■□□□ 1.17
SCNN1A-217ENST00000542260 A0A0G2JS52 829 aa22.37■■□□□ 1.17
SCNN1A-217ENST00000542260 MYT1Q01538 1121 aa22.37■■□□□ 1.17
SCNN1A-217ENST00000542260 PHRF1Q9P1Y6 1649 aaKnown RBP22.37■■□□□ 1.17
SCNN1A-217ENST00000542260 KRT27Q7Z3Y8 459 aa22.36■■□□□ 1.17
SCNN1A-217ENST00000542260 CDK19Q9BWU1 502 aa22.35■■□□□ 1.17
SCNN1A-217ENST00000542260 PRDM11Q9NQV5 511 aa22.33■■□□□ 1.17
SCNN1A-217ENST00000542260 POLR3AO14802 1390 aaPredicted RBP22.33■■□□□ 1.17
SCNN1A-217ENST00000542260 CCDC61Q9Y6R9 512 aa22.32■■□□□ 1.16
SCNN1A-217ENST00000542260 FAM98CQ17RN3 349 aaKnown RBP22.31■■□□□ 1.16
SCNN1A-217ENST00000542260 SRCAPQ6ZRS2 3230 aa22.31■■□□□ 1.16
SCNN1A-217ENST00000542260 QRICH2Q9H0J4 1663 aa22.3■■□□□ 1.16
SCNN1A-217ENST00000542260 ACEP12821 1306 aa22.29■■□□□ 1.16
SCNN1A-217ENST00000542260 THSD7AQ9UPZ6 1657 aa22.28■■□□□ 1.16
SCNN1A-217ENST00000542260 SPATA31A5Q5VU36 1347 aa22.28■■□□□ 1.16
SCNN1A-217ENST00000542260 SPATA31A7Q8IWB4 1347 aa22.28■■□□□ 1.16
SCNN1A-217ENST00000542260 CENPJQ9HC77 1338 aaPredicted RBP22.28■■□□□ 1.16
SCNN1A-217ENST00000542260 KIAA0232Q92628 1395 aa22.27■■□□□ 1.16
SCNN1A-217ENST00000542260 PLEKHG3A1L390 1219 aa22.27■■□□□ 1.16
SCNN1A-217ENST00000542260 RGPD1P0DJD0 1748 aa22.27■■□□□ 1.16
SCNN1A-217ENST00000542260 NBPF1Q3BBV0 1214 aa22.27■■□□□ 1.16
SCNN1A-217ENST00000542260 SRPK2P78362 688 aaKnown RBP22.26■■□□□ 1.15
SCNN1A-217ENST00000542260 NBPF8Q3BBV2 869 aa22.26■■□□□ 1.15
SCNN1A-217ENST00000542260 DEFB132Q7Z7B7 95 aa22.26■■□□□ 1.15
SCNN1A-217ENST00000542260 NRKQ7Z2Y5 1582 aa22.25■■□□□ 1.15
SCNN1A-217ENST00000542260 PPIP5K1Q6PFW1 1433 aa22.24■■□□□ 1.15
SCNN1A-217ENST00000542260 BAG6P46379 1132 aa22.24■■□□□ 1.15
SCNN1A-217ENST00000542260 ABTB2Q8N961 1025 aa22.23■■□□□ 1.15
SCNN1A-217ENST00000542260 NUTM2GQ5VZR2 741 aa22.22■■□□□ 1.15
SCNN1A-217ENST00000542260 BRD4O60885 1362 aaPredicted RBP22.22■■□□□ 1.15
SCNN1A-217ENST00000542260 TRPM1Q7Z4N2 1603 aa22.21■■□□□ 1.15
SCNN1A-217ENST00000542260 ZC3H6P61129 1189 aaKnown RBP22.21■■□□□ 1.15
SCNN1A-217ENST00000542260 CHRNA2Q15822 529 aa22.21■■□□□ 1.15
SCNN1A-217ENST00000542260 STRN4Q9NRL3 753 aa22.21■■□□□ 1.15
SCNN1A-217ENST00000542260 SPATA31A1Q5TZJ5 1347 aa22.21■■□□□ 1.15
SCNN1A-217ENST00000542260 NLRP13Q86W25 1043 aa22.19■■□□□ 1.14
SCNN1A-217ENST00000542260 CPDO75976 1380 aa22.19■■□□□ 1.14
SCNN1A-217ENST00000542260 LMO7Q8WWI1 1683 aa22.18■■□□□ 1.14
SCNN1A-217ENST00000542260 USP19O94966 1318 aa22.18■■□□□ 1.14
SCNN1A-217ENST00000542260 EVA1CP58658 441 aa22.18■■□□□ 1.14
SCNN1A-217ENST00000542260 CABP2Q9NPB3 220 aa22.18■■□□□ 1.14
SCNN1A-217ENST00000542260 TNS1Q9HBL0 1735 aaKnown RBP22.17■■□□□ 1.14
SCNN1A-217ENST00000542260 SSH2Q76I76 1423 aa22.17■■□□□ 1.14
SCNN1A-217ENST00000542260 L3MBTL2Q969R5 705 aa22.17■■□□□ 1.14
SCNN1A-217ENST00000542260 USP6P35125 1406 aa22.14■■□□□ 1.14
SCNN1A-217ENST00000542260 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.14
SCNN1A-217ENST00000542260 EVC2Q86UK5 1308 aa22.14■■□□□ 1.14
SCNN1A-217ENST00000542260 DISP2A7MBM2 1401 aa22.14■■□□□ 1.13
SCNN1A-217ENST00000542260 ROCK2O75116 1388 aaKnown RBP22.13■■□□□ 1.13
SCNN1A-217ENST00000542260 LRP5O75197 1615 aa22.13■■□□□ 1.13
SCNN1A-217ENST00000542260 FAM182BQ5T319 152 aa22.13■■□□□ 1.13
SCNN1A-217ENST00000542260 BARGINQ6ZT62 677 aa22.13■■□□□ 1.13
SCNN1A-217ENST00000542260 USP35Q9P2H5 1018 aa22.13■■□□□ 1.13
SCNN1A-217ENST00000542260 GCP02774 474 aa22.12■■□□□ 1.13
SCNN1A-217ENST00000542260 FAM196AQ6ZSG2 479 aa22.12■■□□□ 1.13
SCNN1A-217ENST00000542260 CABP1Q9NZU7 370 aa22.11■■□□□ 1.13
SCNN1A-217ENST00000542260 SLIT3O75094 1523 aa22.11■■□□□ 1.13
SCNN1A-217ENST00000542260 EN1Q05925 392 aaPredicted RBP22.1■■□□□ 1.13
SCNN1A-217ENST00000542260 COL5A2P05997 1499 aaPredicted RBP22.09■■□□□ 1.13
SCNN1A-217ENST00000542260 PDE3BQ13370 1112 aa22.09■■□□□ 1.13
SCNN1A-217ENST00000542260 TCP11L2Q8N4U5 519 aa22.09■■□□□ 1.13
SCNN1A-217ENST00000542260 SIN3AQ96ST3 1273 aa22.09■■□□□ 1.13
SCNN1A-217ENST00000542260 THRAP3Q9Y2W1 955 aaKnown RBP22.09■■□□□ 1.13
SCNN1A-217ENST00000542260 PIK3C2AO00443 1686 aa22.09■■□□□ 1.13
SCNN1A-217ENST00000542260 AKAP12Q02952 1782 aa22.08■■□□□ 1.13
SCNN1A-217ENST00000542260 NLRP6P59044 892 aa22.08■■□□□ 1.13
SCNN1A-217ENST00000542260 NEUROD1Q13562 356 aa22.08■■□□□ 1.13
SCNN1A-217ENST00000542260 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.13
SCNN1A-217ENST00000542260 PARP4Q9UKK3 1724 aaKnown RBP22.08■■□□□ 1.12
SCNN1A-217ENST00000542260 CRB1P82279 1406 aa22.06■■□□□ 1.12
SCNN1A-217ENST00000542260 PARD3Q8TEW0 1356 aa22.05■■□□□ 1.12
SCNN1A-217ENST00000542260 TRIM37O94972 964 aa22.05■■□□□ 1.12
SCNN1A-217ENST00000542260 ZNF692Q9BU19 519 aaPredicted RBP22.05■■□□□ 1.12
SCNN1A-217ENST00000542260 AATKQ6ZMQ8 1374 aa22.04■■□□□ 1.12
SCNN1A-217ENST00000542260 ZBTB7CA1YPR0 619 aa22.04■■□□□ 1.12
SCNN1A-217ENST00000542260 PSDA5PKW4 1024 aaPredicted RBP22.04■■□□□ 1.12
SCNN1A-217ENST00000542260 C11orf95C9JLR9 678 aaPredicted RBP22.02■■□□□ 1.12
SCNN1A-217ENST00000542260 APBA3O96018 575 aa22.01■■□□□ 1.11
SCNN1A-217ENST00000542260 EZH2Q15910 746 aaKnown RBP22.01■■□□□ 1.11
SCNN1A-217ENST00000542260 KCNH5Q8NCM2 988 aa22.01■■□□□ 1.11
SCNN1A-217ENST00000542260 TTC21AQ8NDW8 1320 aa22.01■■□□□ 1.11
SCNN1A-217ENST00000542260 WNK3Q9BYP7 1800 aa22.01■■□□□ 1.11
SCNN1A-217ENST00000542260 RREB1Q92766 1687 aa22.01■■□□□ 1.11
SCNN1A-217ENST00000542260 SBNO2Q9Y2G9 1366 aa21.99■■□□□ 1.11
SCNN1A-217ENST00000542260 COL18A1P39060 1754 aa21.99■■□□□ 1.11
SCNN1A-217ENST00000542260 LRRC37A3O60309 1634 aa21.99■■□□□ 1.11
SCNN1A-217ENST00000542260 CPSF1Q10570 1443 aaKnown RBP21.99■■□□□ 1.11
SCNN1A-217ENST00000542260 MON2Q7Z3U7 1717 aa21.99■■□□□ 1.11
SCNN1A-217ENST00000542260 TTC21BQ7Z4L5 1316 aa21.99■■□□□ 1.11
SCNN1A-217ENST00000542260 R3HDM1Q15032 1099 aaKnown RBP21.98■■□□□ 1.11
SCNN1A-217ENST00000542260 CAMKK2Q96RR4 588 aa21.98■■□□□ 1.11
SCNN1A-217ENST00000542260 TOM1L2Q6ZVM7 507 aa21.97■■□□□ 1.11
SCNN1A-217ENST00000542260 NUP188Q5SRE5 1749 aa21.97■■□□□ 1.11
SCNN1A-217ENST00000542260 OVOS2A0A0G2JMS6 1433 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms