RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 KIAA1210Q9ULL0 1709 aa28.88■■■□□ 2.21
DDX11-220ENST00000542244 ONECUT3O60422 494 aaPredicted RBP28.87■■■□□ 2.21
DDX11-220ENST00000542244 NUTM2GQ5VZR2 741 aa28.87■■■□□ 2.21
DDX11-220ENST00000542244 SIN3AQ96ST3 1273 aa28.87■■■□□ 2.21
DDX11-220ENST00000542244 TOPAZ1Q8N9V7 1692 aa28.84■■■□□ 2.21
DDX11-220ENST00000542244 L3MBTL2Q969R5 705 aa28.84■■■□□ 2.21
DDX11-220ENST00000542244 ACEP12821 1306 aa28.83■■■□□ 2.21
DDX11-220ENST00000542244 ITSN1Q15811 1721 aa28.83■■■□□ 2.21
DDX11-220ENST00000542244 FAM98CQ17RN3 349 aaKnown RBP28.82■■■□□ 2.2
DDX11-220ENST00000542244 COL14A1Q05707 1796 aaKnown RBP28.82■■■□□ 2.2
DDX11-220ENST00000542244 POLR3AO14802 1390 aaPredicted RBP28.81■■■□□ 2.2
DDX11-220ENST00000542244 NBPF8Q3BBV2 869 aa28.81■■■□□ 2.2
DDX11-220ENST00000542244 DEFB132Q7Z7B7 95 aa28.81■■■□□ 2.2
DDX11-220ENST00000542244 CHRNA2Q15822 529 aa28.8■■■□□ 2.2
DDX11-220ENST00000542244 CCDC61Q9Y6R9 512 aa28.79■■■□□ 2.2
DDX11-220ENST00000542244 KIAA0232Q92628 1395 aa28.78■■■□□ 2.2
DDX11-220ENST00000542244 PLEKHG3A1L390 1219 aa28.78■■■□□ 2.2
DDX11-220ENST00000542244 CCDC125Q86Z20 511 aa28.78■■■□□ 2.2
DDX11-220ENST00000542244 CABP2Q9NPB3 220 aa28.78■■■□□ 2.2
DDX11-220ENST00000542244 BLMP54132 1417 aaPredicted RBP28.77■■■□□ 2.2
DDX11-220ENST00000542244 ZC3H6P61129 1189 aaKnown RBP28.77■■■□□ 2.2
DDX11-220ENST00000542244 KRT27Q7Z3Y8 459 aa28.77■■■□□ 2.2
DDX11-220ENST00000542244 PRDM11Q9NQV5 511 aa28.77■■■□□ 2.2
DDX11-220ENST00000542244 PHRF1Q9P1Y6 1649 aaKnown RBP28.76■■■□□ 2.2
DDX11-220ENST00000542244 CENPJQ9HC77 1338 aaPredicted RBP28.76■■■□□ 2.19
DDX11-220ENST00000542244 FAM182BQ5T319 152 aa28.76■■■□□ 2.19
DDX11-220ENST00000542244 SPATA31A5Q5VU36 1347 aa28.75■■■□□ 2.19
DDX11-220ENST00000542244 SPATA31A7Q8IWB4 1347 aa28.75■■■□□ 2.19
DDX11-220ENST00000542244 A0A0G2JS52 829 aa28.74■■■□□ 2.19
DDX11-220ENST00000542244 MYT1Q01538 1121 aa28.74■■■□□ 2.19
DDX11-220ENST00000542244 NEUROD1Q13562 356 aa28.74■■■□□ 2.19
DDX11-220ENST00000542244 SRPK2P78362 688 aaKnown RBP28.73■■■□□ 2.19
DDX11-220ENST00000542244 PPIP5K1Q6PFW1 1433 aa28.71■■■□□ 2.19
DDX11-220ENST00000542244 ZRANB1Q9UGI0 708 aa28.71■■■□□ 2.19
DDX11-220ENST00000542244 QRICH2Q9H0J4 1663 aa28.7■■■□□ 2.19
DDX11-220ENST00000542244 STRN4Q9NRL3 753 aa28.69■■■□□ 2.18
DDX11-220ENST00000542244 ABTB2Q8N961 1025 aa28.68■■■□□ 2.18
DDX11-220ENST00000542244 SRCAPQ6ZRS2 3230 aa28.68■■■□□ 2.18
DDX11-220ENST00000542244 NRKQ7Z2Y5 1582 aa28.67■■■□□ 2.18
DDX11-220ENST00000542244 TRPM1Q7Z4N2 1603 aa28.67■■■□□ 2.18
DDX11-220ENST00000542244 THSD7AQ9UPZ6 1657 aa28.67■■■□□ 2.18
DDX11-220ENST00000542244 CABP1Q9NZU7 370 aa28.66■■■□□ 2.18
DDX11-220ENST00000542244 SPATA31A1Q5TZJ5 1347 aa28.66■■■□□ 2.18
DDX11-220ENST00000542244 USP19O94966 1318 aa28.65■■■□□ 2.18
DDX11-220ENST00000542244 CAMTA1Q9Y6Y1 1673 aa28.64■■■□□ 2.17
DDX11-220ENST00000542244 USP35Q9P2H5 1018 aa28.61■■■□□ 2.17
DDX11-220ENST00000542244 SF3B2Q13435 895 aaKnown RBP28.6■■■□□ 2.17
DDX11-220ENST00000542244 LARP1Q6PKG0 1096 aaKnown RBP28.6■■■□□ 2.17
DDX11-220ENST00000542244 SSH2Q76I76 1423 aa28.59■■■□□ 2.17
DDX11-220ENST00000542244 LMO7Q8WWI1 1683 aa28.58■■■□□ 2.17
DDX11-220ENST00000542244 GCP02774 474 aa28.58■■■□□ 2.17
DDX11-220ENST00000542244 USP6P35125 1406 aa28.58■■■□□ 2.17
DDX11-220ENST00000542244 ROCK2O75116 1388 aaKnown RBP28.57■■■□□ 2.16
DDX11-220ENST00000542244 CPDO75976 1380 aa28.56■■■□□ 2.16
DDX11-220ENST00000542244 EN1Q05925 392 aaPredicted RBP28.55■■■□□ 2.16
DDX11-220ENST00000542244 NLRP13Q86W25 1043 aa28.55■■■□□ 2.16
DDX11-220ENST00000542244 EVA1CP58658 441 aa28.54■■■□□ 2.16
DDX11-220ENST00000542244 EVC2Q86UK5 1308 aa28.52■■■□□ 2.16
DDX11-220ENST00000542244 ZBTB7CA1YPR0 619 aa28.52■■■□□ 2.16
DDX11-220ENST00000542244 PSDA5PKW4 1024 aaPredicted RBP28.51■■■□□ 2.15
DDX11-220ENST00000542244 NLRP6P59044 892 aa28.51■■■□□ 2.15
DDX11-220ENST00000542244 PIK3C2AO00443 1686 aa28.51■■■□□ 2.15
DDX11-220ENST00000542244 BAG6P46379 1132 aa28.5■■■□□ 2.15
DDX11-220ENST00000542244 TNS1Q9HBL0 1735 aaKnown RBP28.49■■■□□ 2.15
DDX11-220ENST00000542244 SLIT3O75094 1523 aa28.49■■■□□ 2.15
DDX11-220ENST00000542244 COL5A2P05997 1499 aaPredicted RBP28.48■■■□□ 2.15
DDX11-220ENST00000542244 BARGINQ6ZT62 677 aa28.48■■■□□ 2.15
DDX11-220ENST00000542244 RGPD1P0DJD0 1748 aa28.47■■■□□ 2.15
DDX11-220ENST00000542244 TRIM37O94972 964 aa28.47■■■□□ 2.15
DDX11-220ENST00000542244 TCP11L2Q8N4U5 519 aa28.46■■■□□ 2.15
DDX11-220ENST00000542244 BRD4O60885 1362 aaPredicted RBP28.46■■■□□ 2.15
DDX11-220ENST00000542244 EZH2Q15910 746 aaKnown RBP28.45■■■□□ 2.14
DDX11-220ENST00000542244 TTC21BQ7Z4L5 1316 aa28.44■■■□□ 2.14
DDX11-220ENST00000542244 AXIN2Q9Y2T1 843 aa28.44■■■□□ 2.14
DDX11-220ENST00000542244 COL18A1P39060 1754 aa28.42■■■□□ 2.14
DDX11-220ENST00000542244 AKAP12Q02952 1782 aa28.42■■■□□ 2.14
DDX11-220ENST00000542244 SOX12O15370 315 aa28.41■■■□□ 2.14
DDX11-220ENST00000542244 FAM196AQ6ZSG2 479 aa28.41■■■□□ 2.14
DDX11-220ENST00000542244 DISP2A7MBM2 1401 aa28.41■■■□□ 2.14
DDX11-220ENST00000542244 CPSF1Q10570 1443 aaKnown RBP28.41■■■□□ 2.14
DDX11-220ENST00000542244 AATKQ6ZMQ8 1374 aa28.4■■■□□ 2.14
DDX11-220ENST00000542244 CAMKK2Q96RR4 588 aa28.4■■■□□ 2.14
DDX11-220ENST00000542244 CRB1P82279 1406 aa28.38■■■□□ 2.13
DDX11-220ENST00000542244 PDE3BQ13370 1112 aa28.38■■■□□ 2.13
DDX11-220ENST00000542244 CARD11Q9BXL7 1154 aa28.38■■■□□ 2.13
DDX11-220ENST00000542244 CD163L1Q9NR16 1453 aa28.36■■■□□ 2.13
DDX11-220ENST00000542244 APBA3O96018 575 aa28.36■■■□□ 2.13
DDX11-220ENST00000542244 R3HDM1Q15032 1099 aaKnown RBP28.36■■■□□ 2.13
DDX11-220ENST00000542244 ARHGEF25Q86VW2 580 aa28.36■■■□□ 2.13
DDX11-220ENST00000542244 ZNF692Q9BU19 519 aaPredicted RBP28.36■■■□□ 2.13
DDX11-220ENST00000542244 THRAP3Q9Y2W1 955 aaKnown RBP28.35■■■□□ 2.13
DDX11-220ENST00000542244 KTN1Q86UP2 1357 aaKnown RBP28.35■■■□□ 2.13
DDX11-220ENST00000542244 PARP4Q9UKK3 1724 aaKnown RBP28.33■■■□□ 2.13
DDX11-220ENST00000542244 NFAT5O94916 1531 aa28.33■■■□□ 2.13
DDX11-220ENST00000542244 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.32■■■□□ 2.12
DDX11-220ENST00000542244 SBNO2Q9Y2G9 1366 aa28.32■■■□□ 2.12
DDX11-220ENST00000542244 RGPD5Q99666 1765 aa28.32■■■□□ 2.12
DDX11-220ENST00000542244 TOM1L2Q6ZVM7 507 aa28.31■■■□□ 2.12
DDX11-220ENST00000542244 PTF1AQ7RTS3 328 aa28.31■■■□□ 2.12
DDX11-220ENST00000542244 TONSLQ96HA7 1378 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms