RNA–Protein interactions for RNA: ENST00000542099.5

ARL6IP4-219, Transcript of ADP ribosylation factor like GTPase 6 interacting protein 4, human

TSL 3

Gene ARL6IP4, Length 1,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARL6IP4-219	ENST00000542099	MYT1	Q01538	1121 aa		33.99	■■■■□ 3.03
ARL6IP4-219	ENST00000542099	DEFB132	Q7Z7B7	95 aa		33.99	■■■■□ 3.03
ARL6IP4-219	ENST00000542099	COL14A1	Q05707	1796 aa	Known RBP	33.98	■■■■□ 3.03
ARL6IP4-219	ENST00000542099	PAK3	O75914	559 aa	Predicted RBP	33.97	■■■■□ 3.03
ARL6IP4-219	ENST00000542099	FAM98C	Q17RN3	349 aa	Known RBP	33.96	■■■■□ 3.03
ARL6IP4-219	ENST00000542099	NRAP	Q86VF7	1730 aa		33.94	■■■■□ 3.02
ARL6IP4-219	ENST00000542099	NUDT16	Q96DE0	195 aa	Known RBP	33.94	■■■■□ 3.02
ARL6IP4-219	ENST00000542099	BAG6	P46379	1132 aa		33.92	■■■■□ 3.02
ARL6IP4-219	ENST00000542099	PRDM11	Q9NQV5	511 aa		33.92	■■■■□ 3.02
ARL6IP4-219	ENST00000542099	SPATA31A5	Q5VU36	1347 aa		33.91	■■■■□ 3.02
ARL6IP4-219	ENST00000542099	SPATA31A7	Q8IWB4	1347 aa		33.91	■■■■□ 3.02
ARL6IP4-219	ENST00000542099	ITSN1	Q15811	1721 aa		33.9	■■■■□ 3.02
ARL6IP4-219	ENST00000542099	ATP7B	P35670	1465 aa		33.88	■■■■□ 3.01
ARL6IP4-219	ENST00000542099	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.87	■■■■□ 3.01
ARL6IP4-219	ENST00000542099	CDK19	Q9BWU1	502 aa		33.87	■■■■□ 3.01
ARL6IP4-219	ENST00000542099	CCDC61	Q9Y6R9	512 aa		33.86	■■■■□ 3.01
ARL6IP4-219	ENST00000542099	CRYBG1	Q9Y4K1	1723 aa		33.83	■■■■□ 3.01
ARL6IP4-219	ENST00000542099	POLR3A	O14802	1390 aa	Predicted RBP	33.82	■■■■□ 3
ARL6IP4-219	ENST00000542099	KIAA0232	Q92628	1395 aa		33.81	■■■■□ 3
ARL6IP4-219	ENST00000542099	PLEKHG3	A1L390	1219 aa		33.8	■■■■□ 3
ARL6IP4-219	ENST00000542099	NBPF8	Q3BBV2	869 aa		33.8	■■■■□ 3
ARL6IP4-219	ENST00000542099	KIAA1210	Q9ULL0	1709 aa		33.79	■■■■□ 3
ARL6IP4-219	ENST00000542099	ACE	P12821	1306 aa		33.79	■■■■□ 3
ARL6IP4-219	ENST00000542099	SPATA31A1	Q5TZJ5	1347 aa		33.79	■■■■□ 3
ARL6IP4-219	ENST00000542099	THSD7A	Q9UPZ6	1657 aa		33.74	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	CHRNA2	Q15822	529 aa		33.74	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	RGPD1	P0DJD0	1748 aa		33.73	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	ZC3H6	P61129	1189 aa	Known RBP	33.73	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	STRN4	Q9NRL3	753 aa		33.73	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	EVA1C	P58658	441 aa		33.72	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	FAM196A	Q6ZSG2	479 aa		33.72	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	ABTB2	Q8N961	1025 aa		33.72	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	DISP2	A7MBM2	1401 aa		33.71	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	EN1	Q05925	392 aa	Predicted RBP	33.71	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	FAM182B	Q5T319	152 aa		33.7	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	NUTM2G	Q5VZR2	741 aa		33.7	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	PHRF1	Q9P1Y6	1649 aa	Known RBP	33.7	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	TOPAZ1	Q8N9V7	1692 aa		33.7	■■■□□ 2.99
ARL6IP4-219	ENST00000542099	LRP5	O75197	1615 aa		33.68	■■■□□ 2.98
ARL6IP4-219	ENST00000542099	NBPF1	Q3BBV0	1214 aa		33.68	■■■□□ 2.98
ARL6IP4-219	ENST00000542099	BARGIN	Q6ZT62	677 aa		33.68	■■■□□ 2.98
ARL6IP4-219	ENST00000542099	NLRP13	Q86W25	1043 aa		33.67	■■■□□ 2.98
ARL6IP4-219	ENST00000542099	BRD4	O60885	1362 aa	Predicted RBP	33.67	■■■□□ 2.98
ARL6IP4-219	ENST00000542099	CPD	O75976	1380 aa		33.67	■■■□□ 2.98
ARL6IP4-219	ENST00000542099	PSD	A5PKW4	1024 aa	Predicted RBP	33.66	■■■□□ 2.98
ARL6IP4-219	ENST00000542099	SRPK2	P78362	688 aa	Known RBP	33.66	■■■□□ 2.98
ARL6IP4-219	ENST00000542099	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.66	■■■□□ 2.98
ARL6IP4-219	ENST00000542099	SSH2	Q76I76	1423 aa		33.63	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	USP19	O94966	1318 aa		33.63	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	PDE3B	Q13370	1112 aa		33.62	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	USP35	Q9P2H5	1018 aa		33.62	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	PPIP5K1	Q6PFW1	1433 aa		33.61	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	TCP11L2	Q8N4U5	519 aa		33.6	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	THRAP3	Q9Y2W1	955 aa	Known RBP	33.6	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	PARD3	Q8TEW0	1356 aa		33.6	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	TRIM37	O94972	964 aa		33.59	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	GC	P02774	474 aa		33.59	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	NRK	Q7Z2Y5	1582 aa		33.58	■■■□□ 2.97
ARL6IP4-219	ENST00000542099	LARP1	Q6PKG0	1096 aa	Known RBP	33.57	■■■□□ 2.96
ARL6IP4-219	ENST00000542099	CAMKK2	Q96RR4	588 aa		33.57	■■■□□ 2.96
ARL6IP4-219	ENST00000542099	CAMTA1	Q9Y6Y1	1673 aa		33.57	■■■□□ 2.96
ARL6IP4-219	ENST00000542099	TNS1	Q9HBL0	1735 aa	Known RBP	33.56	■■■□□ 2.96
ARL6IP4-219	ENST00000542099	EZH2	Q15910	746 aa	Known RBP	33.56	■■■□□ 2.96
ARL6IP4-219	ENST00000542099	CABP2	Q9NPB3	220 aa		33.56	■■■□□ 2.96
ARL6IP4-219	ENST00000542099	C11orf95	C9JLR9	678 aa	Predicted RBP	33.55	■■■□□ 2.96
ARL6IP4-219	ENST00000542099	APBA3	O96018	575 aa		33.55	■■■□□ 2.96
ARL6IP4-219	ENST00000542099	R3HDM1	Q15032	1099 aa	Known RBP	33.55	■■■□□ 2.96
ARL6IP4-219	ENST00000542099	LMO7	Q8WWI1	1683 aa		33.52	■■■□□ 2.96
ARL6IP4-219	ENST00000542099	CABP1	Q9NZU7	370 aa		33.51	■■■□□ 2.95
ARL6IP4-219	ENST00000542099	NLRP6	P59044	892 aa		33.49	■■■□□ 2.95
ARL6IP4-219	ENST00000542099	USP6	P35125	1406 aa		33.48	■■■□□ 2.95
ARL6IP4-219	ENST00000542099	EVC2	Q86UK5	1308 aa		33.48	■■■□□ 2.95
ARL6IP4-219	ENST00000542099	COL5A2	P05997	1499 aa	Predicted RBP	33.46	■■■□□ 2.95
ARL6IP4-219	ENST00000542099	L3MBTL2	Q969R5	705 aa		33.46	■■■□□ 2.95
ARL6IP4-219	ENST00000542099	AATK	Q6ZMQ8	1374 aa		33.46	■■■□□ 2.95
ARL6IP4-219	ENST00000542099	QRICH2	Q9H0J4	1663 aa		33.45	■■■□□ 2.95
ARL6IP4-219	ENST00000542099	CRB1	P82279	1406 aa		33.45	■■■□□ 2.94
ARL6IP4-219	ENST00000542099	NBPF14	Q5TI25	921 aa		33.43	■■■□□ 2.94
ARL6IP4-219	ENST00000542099	ZNF692	Q9BU19	519 aa	Predicted RBP	33.43	■■■□□ 2.94
ARL6IP4-219	ENST00000542099	PARP4	Q9UKK3	1724 aa	Known RBP	33.39	■■■□□ 2.94
ARL6IP4-219	ENST00000542099	SLIT3	O75094	1523 aa		33.38	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	ZBTB7C	A1YPR0	619 aa		33.37	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	KCNH5	Q8NCM2	988 aa		33.36	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	TOM1L2	Q6ZVM7	507 aa		33.35	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.34	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	OVOS2	A0A0G2JMS6	1433 aa		33.34	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	OVOS2	A0A0J9YW53	1432 aa		33.34	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	OVOS2	Q6IE36	1432 aa		33.34	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	DDB1	Q16531	1140 aa		33.33	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	ROCK2	O75116	1388 aa	Known RBP	33.33	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	RREB1	Q92766	1687 aa		33.33	■■■□□ 2.93
ARL6IP4-219	ENST00000542099	TTC21A	Q8NDW8	1320 aa		33.31	■■■□□ 2.92
ARL6IP4-219	ENST00000542099	TRPM1	Q7Z4N2	1603 aa		33.31	■■■□□ 2.92
ARL6IP4-219	ENST00000542099	TTC21B	Q7Z4L5	1316 aa		33.3	■■■□□ 2.92
ARL6IP4-219	ENST00000542099	WDR17	Q8IZU2	1322 aa		33.3	■■■□□ 2.92
ARL6IP4-219	ENST00000542099	ARHGEF25	Q86VW2	580 aa		33.29	■■■□□ 2.92
ARL6IP4-219	ENST00000542099	PLSCR1	O15162	318 aa		33.28	■■■□□ 2.92
ARL6IP4-219	ENST00000542099	SIN3A	Q96ST3	1273 aa		33.28	■■■□□ 2.92
ARL6IP4-219	ENST00000542099	PIK3C2A	O00443	1686 aa		33.28	■■■□□ 2.92
ARL6IP4-219	ENST00000542099	NUP188	Q5SRE5	1749 aa		33.27	■■■□□ 2.92

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms