RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TMPOP42166 694 aaKnown RBP19.29■□□□□ 0.68
CNOT9-208ENST00000542068 A0A1W2PP64 1363 aa19.28■□□□□ 0.68
CNOT9-208ENST00000542068 KIF1BO60333 1816 aa19.28■□□□□ 0.68
CNOT9-208ENST00000542068 NLRP1Q9C000 1473 aa19.28■□□□□ 0.68
CNOT9-208ENST00000542068 ZRANB1Q9UGI0 708 aa19.28■□□□□ 0.68
CNOT9-208ENST00000542068 PPRC1Q5VV67 1664 aaKnown RBP19.28■□□□□ 0.68
CNOT9-208ENST00000542068 PRKAR2BP31323 418 aa19.28■□□□□ 0.68
CNOT9-208ENST00000542068 INO80Q9ULG1 1556 aaPredicted RBP19.28■□□□□ 0.68
CNOT9-208ENST00000542068 CHMP5Q9NZZ3 219 aa19.27■□□□□ 0.68
CNOT9-208ENST00000542068 RSPH6AQ9H0K4 717 aa19.27■□□□□ 0.67
CNOT9-208ENST00000542068 KIDINS220Q9ULH0 1771 aa19.26■□□□□ 0.67
CNOT9-208ENST00000542068 ABCA9Q8IUA7 1624 aa19.26■□□□□ 0.67
CNOT9-208ENST00000542068 MYOM2P54296 1465 aa19.26■□□□□ 0.67
CNOT9-208ENST00000542068 HSP90AB1P08238 724 aaKnown RBP19.26■□□□□ 0.67
CNOT9-208ENST00000542068 RRS1Q15050 365 aaKnown RBP19.25■□□□□ 0.67
CNOT9-208ENST00000542068 ATF7IPQ6VMQ6 1270 aa19.25■□□□□ 0.67
CNOT9-208ENST00000542068 EMILIN1Q9Y6C2 1016 aa19.24■□□□□ 0.67
CNOT9-208ENST00000542068 ANKRD36BQ8N2N9 1353 aa19.24■□□□□ 0.67
CNOT9-208ENST00000542068 ANKRD45Q5TZF3 282 aa19.23■□□□□ 0.67
CNOT9-208ENST00000542068 DDX19BQ9UMR2 479 aa19.23■□□□□ 0.67
CNOT9-208ENST00000542068 ARAP3Q8WWN8 1544 aa19.23■□□□□ 0.67
CNOT9-208ENST00000542068 NME9Q86XW9 330 aa19.22■□□□□ 0.67
CNOT9-208ENST00000542068 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
CNOT9-208ENST00000542068 MROH2AA6NES4 1674 aa19.22■□□□□ 0.67
CNOT9-208ENST00000542068 MROH1Q8NDA8 1641 aa19.21■□□□□ 0.67
CNOT9-208ENST00000542068 PNNQ9H307 717 aaKnown RBP19.21■□□□□ 0.67
CNOT9-208ENST00000542068 TRIM35Q9UPQ4 493 aa19.21■□□□□ 0.67
CNOT9-208ENST00000542068 APBB1O00213 710 aa19.2■□□□□ 0.66
CNOT9-208ENST00000542068 DCTN1Q14203 1278 aa19.2■□□□□ 0.66
CNOT9-208ENST00000542068 RBM42Q9BTD8 480 aaKnown RBP19.2■□□□□ 0.66
CNOT9-208ENST00000542068 SBNO2Q9Y2G9 1366 aa19.19■□□□□ 0.66
CNOT9-208ENST00000542068 DEPDC5O75140 1603 aa19.18■□□□□ 0.66
CNOT9-208ENST00000542068 CCDC27Q2M243 656 aa19.18■□□□□ 0.66
CNOT9-208ENST00000542068 PHACTR3Q96KR7 559 aa19.18■□□□□ 0.66
CNOT9-208ENST00000542068 AAMPQ13685 434 aa19.17■□□□□ 0.66
CNOT9-208ENST00000542068 VWDEQ8N2E2 1590 aa19.17■□□□□ 0.66
CNOT9-208ENST00000542068 ABCC3O15438 1527 aa19.16■□□□□ 0.66
CNOT9-208ENST00000542068 FAM83GA6ND36 823 aa19.16■□□□□ 0.66
CNOT9-208ENST00000542068 MLH3Q9UHC1 1453 aa19.16■□□□□ 0.66
CNOT9-208ENST00000542068 TNPO1Q92973 898 aaKnown RBP19.16■□□□□ 0.66
CNOT9-208ENST00000542068 HDAC1Q13547 482 aaPredicted RBP19.15■□□□□ 0.66
CNOT9-208ENST00000542068 GRPEL1Q9HAV7 217 aa19.15■□□□□ 0.66
CNOT9-208ENST00000542068 ADGRB3O60242 1522 aa19.15■□□□□ 0.66
CNOT9-208ENST00000542068 CD2BP2O95400 341 aaKnown RBP19.14■□□□□ 0.65
CNOT9-208ENST00000542068 CHD1LQ86WJ1 897 aa19.14■□□□□ 0.65
CNOT9-208ENST00000542068 ZBTB40Q9NUA8 1239 aa19.14■□□□□ 0.65
CNOT9-208ENST00000542068 ATAD2Q6PL18 1390 aa19.14■□□□□ 0.65
CNOT9-208ENST00000542068 IPO8O15397 1037 aaKnown RBP19.13■□□□□ 0.65
CNOT9-208ENST00000542068 POLKQ9UBT6 870 aa19.13■□□□□ 0.65
CNOT9-208ENST00000542068 SMC5Q8IY18 1101 aa19.13■□□□□ 0.65
CNOT9-208ENST00000542068 COG3Q96JB2 828 aa19.13■□□□□ 0.65
CNOT9-208ENST00000542068 IQSEC2Q5JU85 1478 aa19.13■□□□□ 0.65
CNOT9-208ENST00000542068 FSD2A1L4K1 749 aa19.13■□□□□ 0.65
CNOT9-208ENST00000542068 NCLP19338 710 aaKnown RBP19.13■□□□□ 0.65
CNOT9-208ENST00000542068 C14orf37Q86TY3 774 aa19.13■□□□□ 0.65
CNOT9-208ENST00000542068 SLC26A8Q96RN1 970 aa19.13■□□□□ 0.65
CNOT9-208ENST00000542068 TRIM44Q96DX7 344 aaPredicted RBP19.12■□□□□ 0.65
CNOT9-208ENST00000542068 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
CNOT9-208ENST00000542068 YTHDC2Q9H6S0 1430 aaKnown RBP19.12■□□□□ 0.65
CNOT9-208ENST00000542068 ZBTB7CA1YPR0 619 aa19.12■□□□□ 0.65
CNOT9-208ENST00000542068 TSPYL6Q8N831 410 aa19.12■□□□□ 0.65
CNOT9-208ENST00000542068 HECW2Q9P2P5 1572 aa19.12■□□□□ 0.65
CNOT9-208ENST00000542068 MRE11P49959 708 aa19.11■□□□□ 0.65
CNOT9-208ENST00000542068 GAS2L3Q86XJ1 694 aa19.11■□□□□ 0.65
CNOT9-208ENST00000542068 FRMPD1Q5SYB0 1578 aa19.11■□□□□ 0.65
CNOT9-208ENST00000542068 DDX11L8A8MPP1 907 aa19.11■□□□□ 0.65
CNOT9-208ENST00000542068 QRICH2Q9H0J4 1663 aa19.11■□□□□ 0.65
CNOT9-208ENST00000542068 CEBPAP49715 358 aaPredicted RBP19.1■□□□□ 0.65
CNOT9-208ENST00000542068 NUCB1Q02818 461 aa19.1■□□□□ 0.65
CNOT9-208ENST00000542068 NUDT16Q96DE0 195 aaKnown RBP19.1■□□□□ 0.65
CNOT9-208ENST00000542068 SHPRHQ149N8 1683 aa19.09■□□□□ 0.65
CNOT9-208ENST00000542068 UBE2Q2Q8WVN8 375 aa19.09■□□□□ 0.65
CNOT9-208ENST00000542068 VIRMAQ69YN4 1812 aaKnown RBP19.09■□□□□ 0.65
CNOT9-208ENST00000542068 SSFA2P28290 1259 aa19.08■□□□□ 0.65
CNOT9-208ENST00000542068 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.65
CNOT9-208ENST00000542068 TULP4Q9NRJ4 1543 aa19.08■□□□□ 0.65
CNOT9-208ENST00000542068 ADGRB1O14514 1584 aa19.08■□□□□ 0.65
CNOT9-208ENST00000542068 ZNF692Q9BU19 519 aaPredicted RBP19.08■□□□□ 0.64
CNOT9-208ENST00000542068 GLI2P10070 1586 aa19.08■□□□□ 0.64
CNOT9-208ENST00000542068 KIF16BQ96L93 1317 aa19.07■□□□□ 0.64
CNOT9-208ENST00000542068 ABCC11Q96J66 1382 aa19.07■□□□□ 0.64
CNOT9-208ENST00000542068 GBP4Q96PP9 640 aa19.07■□□□□ 0.64
CNOT9-208ENST00000542068 NRXN1Q9ULB1 1477 aa19.07■□□□□ 0.64
CNOT9-208ENST00000542068 FCHSD2O94868 740 aa19.06■□□□□ 0.64
CNOT9-208ENST00000542068 KRT24Q2M2I5 525 aa19.06■□□□□ 0.64
CNOT9-208ENST00000542068 TBC1D9Q6ZT07 1266 aa19.06■□□□□ 0.64
CNOT9-208ENST00000542068 MIS18AQ9NYP9 233 aa19.06■□□□□ 0.64
CNOT9-208ENST00000542068 SULT6B1Q6IMI4 303 aa19.06■□□□□ 0.64
CNOT9-208ENST00000542068 AEBP1Q8IUX7 1158 aa19.06■□□□□ 0.64
CNOT9-208ENST00000542068 ERBB4Q15303 1308 aa19.05■□□□□ 0.64
CNOT9-208ENST00000542068 WASLO00401 505 aaPredicted RBP19.05■□□□□ 0.64
CNOT9-208ENST00000542068 FOXD4L5Q5VV16 416 aaPredicted RBP19.05■□□□□ 0.64
CNOT9-208ENST00000542068 FOXD4L4Q8WXT5 416 aaPredicted RBP19.05■□□□□ 0.64
CNOT9-208ENST00000542068 NSD2O96028 1365 aa19.05■□□□□ 0.64
CNOT9-208ENST00000542068 NECTIN2Q92692 538 aa19.05■□□□□ 0.64
CNOT9-208ENST00000542068 LTV1Q96GA3 475 aaPredicted RBP19.05■□□□□ 0.64
CNOT9-208ENST00000542068 GAS2L2Q8NHY3 880 aa19.04■□□□□ 0.64
CNOT9-208ENST00000542068 ESPNB1AK53 854 aa19.04■□□□□ 0.64
CNOT9-208ENST00000542068 CT47B1P0C2W7 299 aaPredicted RBP19.04■□□□□ 0.64
CNOT9-208ENST00000542068 TWISTNBQ3B726 338 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms