RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 FBXO31Q5XUX0 539 aaPredicted RBP11.04□□□□□ -0.64
CIT-211ENST00000541841 LILRB3O75022 631 aa11.03□□□□□ -0.64
CIT-211ENST00000541841 EHBP1Q8NDI1 1231 aa11.02□□□□□ -0.65
CIT-211ENST00000541841 PLEKHG3A1L390 1219 aa11.01□□□□□ -0.65
CIT-211ENST00000541841 HPS1Q92902 700 aa11.01□□□□□ -0.65
CIT-211ENST00000541841 ALDH1A1P00352 501 aa11□□□□□ -0.65
CIT-211ENST00000541841 AVPP01185 164 aa11□□□□□ -0.65
CIT-211ENST00000541841 PROCA1Q8NCQ7 364 aaPredicted RBP11□□□□□ -0.65
CIT-211ENST00000541841 SIAH2O43255 324 aa10.99□□□□□ -0.65
CIT-211ENST00000541841 F12P00748 615 aaPredicted RBP10.99□□□□□ -0.65
CIT-211ENST00000541841 ZNF511Q8NB15 262 aa10.99□□□□□ -0.65
CIT-211ENST00000541841 RSPH6AQ9H0K4 717 aa10.99□□□□□ -0.65
CIT-211ENST00000541841 TLL2Q9Y6L7 1015 aa10.99□□□□□ -0.65
CIT-211ENST00000541841 AXIN1O15169 862 aa10.98□□□□□ -0.65
CIT-211ENST00000541841 TUSC1Q2TAM9 212 aa10.98□□□□□ -0.65
CIT-211ENST00000541841 ATP1B4Q9UN42 357 aaPredicted RBP10.98□□□□□ -0.65
CIT-211ENST00000541841 PRKCSHP14314 528 aaPredicted RBP10.96□□□□□ -0.65
CIT-211ENST00000541841 FOXJ1Q92949 421 aa10.96□□□□□ -0.65
CIT-211ENST00000541841 CRIPAKQ8N1N5 446 aa10.95□□□□□ -0.66
CIT-211ENST00000541841 DDRGK1Q96HY6 314 aa10.95□□□□□ -0.66
CIT-211ENST00000541841 CTDSPL2Q05D32 466 aa10.94□□□□□ -0.66
CIT-211ENST00000541841 SKIV2LQ15477 1246 aaKnown RBP10.94□□□□□ -0.66
CIT-211ENST00000541841 SH3D19Q5HYK7 790 aa10.94□□□□□ -0.66
CIT-211ENST00000541841 HELBQ8NG08 1087 aaPredicted RBP10.94□□□□□ -0.66
CIT-211ENST00000541841 GMPR2Q9P2T1 348 aaKnown RBP10.94□□□□□ -0.66
CIT-211ENST00000541841 NEUROD2Q15784 382 aa10.93□□□□□ -0.66
CIT-211ENST00000541841 CTC1Q2NKJ3 1217 aa10.92□□□□□ -0.66
CIT-211ENST00000541841 SMCPP49901 116 aaPredicted RBP10.91□□□□□ -0.66
CIT-211ENST00000541841 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
CIT-211ENST00000541841 C4orf48Q5BLP8 95 aa10.91□□□□□ -0.66
CIT-211ENST00000541841 WASF2Q9Y6W5 498 aa10.91□□□□□ -0.66
CIT-211ENST00000541841 LRRN4Q8WUT4 740 aa10.9□□□□□ -0.66
CIT-211ENST00000541841 ZNF775Q96BV0 537 aaPredicted RBP10.9□□□□□ -0.66
CIT-211ENST00000541841 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.9□□□□□ -0.66
CIT-211ENST00000541841 AGERQ15109 404 aa10.89□□□□□ -0.67
CIT-211ENST00000541841 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
CIT-211ENST00000541841 ATP13A2Q9NQ11 1180 aa10.88□□□□□ -0.67
CIT-211ENST00000541841 VARSP26640 1264 aaKnown RBP10.87□□□□□ -0.67
CIT-211ENST00000541841 ARID5BQ14865 1188 aa10.87□□□□□ -0.67
CIT-211ENST00000541841 C11orf95C9JLR9 678 aaPredicted RBP10.85□□□□□ -0.67
CIT-211ENST00000541841 AP1G2O75843 785 aa10.85□□□□□ -0.67
CIT-211ENST00000541841 BMP1P13497 986 aa10.85□□□□□ -0.67
CIT-211ENST00000541841 BRPF1P55201 1214 aaPredicted RBP10.85□□□□□ -0.67
CIT-211ENST00000541841 NNTQ13423 1086 aa10.84□□□□□ -0.67
CIT-211ENST00000541841 FAM174AQ8TBP5 190 aa10.84□□□□□ -0.67
CIT-211ENST00000541841 MAGEB6P1A0A0J9YX57 407 aa10.83□□□□□ -0.68
CIT-211ENST00000541841 NR6A1Q15406 480 aa10.83□□□□□ -0.68
CIT-211ENST00000541841 PPP2R2DQ66LE6 453 aa10.83□□□□□ -0.68
CIT-211ENST00000541841 SNRPBP14678 240 aaKnown RBP10.82□□□□□ -0.68
CIT-211ENST00000541841 CARD14Q9BXL6 1004 aa10.82□□□□□ -0.68
CIT-211ENST00000541841 CAPN5O15484 640 aaPredicted RBP10.81□□□□□ -0.68
CIT-211ENST00000541841 BPHLQ86WA6 291 aaPredicted RBP10.81□□□□□ -0.68
CIT-211ENST00000541841 EPS8L1Q8TE68 723 aa10.81□□□□□ -0.68
CIT-211ENST00000541841 HMX1Q9NP08 348 aaPredicted RBP10.81□□□□□ -0.68
CIT-211ENST00000541841 SH3BP5LQ7L8J4 393 aa10.8□□□□□ -0.68
CIT-211ENST00000541841 ADH1CP00326 375 aa10.79□□□□□ -0.68
CIT-211ENST00000541841 NBPF14Q5TI25 921 aa10.79□□□□□ -0.68
CIT-211ENST00000541841 TRIM46Q7Z4K8 759 aa10.79□□□□□ -0.68
CIT-211ENST00000541841 SH3RF1Q7Z6J0 888 aa10.79□□□□□ -0.68
CIT-211ENST00000541841 ARMC2Q8NEN0 867 aa10.79□□□□□ -0.68
CIT-211ENST00000541841 NR3C2P08235 984 aa10.78□□□□□ -0.68
CIT-211ENST00000541841 RFC5P40937 340 aa10.78□□□□□ -0.68
CIT-211ENST00000541841 CDK15Q96Q40 435 aa10.78□□□□□ -0.68
CIT-211ENST00000541841 USP17L8P0C7I0 530 aa10.77□□□□□ -0.69
CIT-211ENST00000541841 GRM5P41594 1212 aa10.77□□□□□ -0.69
CIT-211ENST00000541841 WDR4P57081 412 aaKnown RBP10.77□□□□□ -0.69
CIT-211ENST00000541841 MPNDQ8N594 471 aa10.77□□□□□ -0.69
CIT-211ENST00000541841 PCMTD1Q96MG8 357 aaPredicted RBP10.77□□□□□ -0.69
CIT-211ENST00000541841 TIMP2P16035 220 aa10.76□□□□□ -0.69
CIT-211ENST00000541841 TRIM47Q96LD4 638 aa10.76□□□□□ -0.69
CIT-211ENST00000541841 C1QTNF2Q9BXJ5 285 aa10.76□□□□□ -0.69
CIT-211ENST00000541841 FKBPLQ9UIM3 349 aa10.76□□□□□ -0.69
CIT-211ENST00000541841 ZFAND3Q9H8U3 227 aa10.75□□□□□ -0.69
CIT-211ENST00000541841 FSHRP23945 695 aa10.74□□□□□ -0.69
CIT-211ENST00000541841 ITPKCQ96DU7 683 aa10.74□□□□□ -0.69
CIT-211ENST00000541841 ERFEQ4G0M1 354 aa10.73□□□□□ -0.69
CIT-211ENST00000541841 VASH1Q7L8A9 365 aaPredicted RBP10.73□□□□□ -0.69
CIT-211ENST00000541841 OCSTAMPQ9BR26 566 aa10.73□□□□□ -0.69
CIT-211ENST00000541841 ARHGAP9Q9BRR9 750 aa10.73□□□□□ -0.69
CIT-211ENST00000541841 KLF16Q9BXK1 252 aaPredicted RBP10.73□□□□□ -0.69
CIT-211ENST00000541841 ZIC2O95409 532 aaPredicted RBP10.72□□□□□ -0.69
CIT-211ENST00000541841 SENP2Q9HC62 589 aa10.72□□□□□ -0.69
CIT-211ENST00000541841 ZFP42Q96MM3 310 aa10.71□□□□□ -0.69
CIT-211ENST00000541841 GOPCQ9HD26 462 aa10.71□□□□□ -0.69
CIT-211ENST00000541841 NR5A1Q13285 461 aa10.7□□□□□ -0.7
CIT-211ENST00000541841 PDXDC2PQ6P474 469 aa10.7□□□□□ -0.7
CIT-211ENST00000541841 GPKOWQ92917 476 aaPredicted RBP eCLIP10.7□□□□□ -0.7
CIT-211ENST00000541841 PURBQ96QR8 312 aaKnown RBP10.7□□□□□ -0.7
CIT-211ENST00000541841 TRMT44Q8IYL2 757 aaKnown RBP10.69□□□□□ -0.7
CIT-211ENST00000541841 TRIM34Q9BYJ4 488 aa10.69□□□□□ -0.7
CIT-211ENST00000541841 MRPL14Q6P1L8 145 aaKnown RBP10.68□□□□□ -0.7
CIT-211ENST00000541841 ZBTB33Q86T24 672 aa10.67□□□□□ -0.7
CIT-211ENST00000541841 KIFC2Q96AC6 838 aa10.67□□□□□ -0.7
CIT-211ENST00000541841 SOBPA7XYQ1 873 aa10.66□□□□□ -0.7
CIT-211ENST00000541841 C6orf118Q5T5N4 469 aa10.66□□□□□ -0.7
CIT-211ENST00000541841 TREML4Q6UXN2 200 aa10.66□□□□□ -0.7
CIT-211ENST00000541841 ADAM32Q8TC27 787 aa10.66□□□□□ -0.7
CIT-211ENST00000541841 MAP4K5Q9Y4K4 846 aa10.66□□□□□ -0.7
CIT-211ENST00000541841 LCE2AQ5TA79 106 aaPredicted RBP10.65□□□□□ -0.7
CIT-211ENST00000541841 SLC10A4Q96EP9 437 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms