RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 SSH2Q76I76 1423 aa23.64■■□□□ 1.38
RAB6A-208ENST00000541795 NCOA3Q9Y6Q9 1424 aa23.64■■□□□ 1.38
RAB6A-208ENST00000541795 BLMP54132 1417 aaPredicted RBP23.63■■□□□ 1.37
RAB6A-208ENST00000541795 SHPRHQ149N8 1683 aa23.63■■□□□ 1.37
RAB6A-208ENST00000541795 C19orf44Q9H6X5 657 aa23.62■■□□□ 1.37
RAB6A-208ENST00000541795 COG3Q96JB2 828 aa23.61■■□□□ 1.37
RAB6A-208ENST00000541795 CFAP53Q96M91 514 aa23.61■■□□□ 1.37
RAB6A-208ENST00000541795 ADAMTS8Q9UP79 889 aa23.61■■□□□ 1.37
RAB6A-208ENST00000541795 PHF8Q9UPP1 1060 aa23.61■■□□□ 1.37
RAB6A-208ENST00000541795 SCAF1Q9H7N4 1312 aaKnown RBP23.61■■□□□ 1.37
RAB6A-208ENST00000541795 ZRANB1Q9UGI0 708 aa23.61■■□□□ 1.37
RAB6A-208ENST00000541795 TTC21AQ8NDW8 1320 aa23.6■■□□□ 1.37
RAB6A-208ENST00000541795 DCCP43146 1447 aa23.59■■□□□ 1.37
RAB6A-208ENST00000541795 MAP2P11137 1827 aaKnown RBP23.59■■□□□ 1.37
RAB6A-208ENST00000541795 XIRP1Q702N8 1843 aaKnown RBP23.59■■□□□ 1.37
RAB6A-208ENST00000541795 ESCO1Q5FWF5 840 aa23.58■■□□□ 1.37
RAB6A-208ENST00000541795 OVOS2A0A0J9YW53 1432 aa23.58■■□□□ 1.37
RAB6A-208ENST00000541795 OVOS2Q6IE36 1432 aa23.58■■□□□ 1.37
RAB6A-208ENST00000541795 PIK3C2AO00443 1686 aa23.56■■□□□ 1.36
RAB6A-208ENST00000541795 ZNF335Q9H4Z2 1342 aaPredicted RBP23.56■■□□□ 1.36
RAB6A-208ENST00000541795 AATKQ6ZMQ8 1374 aa23.55■■□□□ 1.36
RAB6A-208ENST00000541795 C1orf167Q5SNV9 1468 aa23.55■■□□□ 1.36
RAB6A-208ENST00000541795 ATF3P18847 181 aa23.55■■□□□ 1.36
RAB6A-208ENST00000541795 KIF1AQ12756 1690 aa23.55■■□□□ 1.36
RAB6A-208ENST00000541795 COL3A1P02461 1466 aaPredicted RBP23.55■■□□□ 1.36
RAB6A-208ENST00000541795 DMRT2Q9Y5R5 561 aa23.54■■□□□ 1.36
RAB6A-208ENST00000541795 LRRC7Q96NW7 1537 aa23.54■■□□□ 1.36
RAB6A-208ENST00000541795 SENP3-EIF4A1A0A087X0R7 540 aa23.53■■□□□ 1.36
RAB6A-208ENST00000541795 MSH6P52701 1360 aa23.53■■□□□ 1.36
RAB6A-208ENST00000541795 ORAI2Q96SN7 254 aa23.52■■□□□ 1.36
RAB6A-208ENST00000541795 POLKQ9UBT6 870 aa23.52■■□□□ 1.36
RAB6A-208ENST00000541795 MST1RQ04912 1400 aa23.52■■□□□ 1.36
RAB6A-208ENST00000541795 SMG6Q86US8 1419 aaKnown RBP23.52■■□□□ 1.36
RAB6A-208ENST00000541795 FBLN1P23142 703 aa23.52■■□□□ 1.36
RAB6A-208ENST00000541795 USP54Q70EL1 1684 aa23.51■■□□□ 1.35
RAB6A-208ENST00000541795 USP31Q70CQ4 1352 aa23.51■■□□□ 1.35
RAB6A-208ENST00000541795 PNPLA6Q8IY17 1366 aa23.51■■□□□ 1.35
RAB6A-208ENST00000541795 CADPS2Q86UW7 1296 aa23.49■■□□□ 1.35
RAB6A-208ENST00000541795 CDK12Q9NYV4 1490 aaPredicted RBP23.49■■□□□ 1.35
RAB6A-208ENST00000541795 MARF1Q9Y4F3 1742 aaKnown RBP23.48■■□□□ 1.35
RAB6A-208ENST00000541795 PPM1GO15355 546 aaPredicted RBP23.48■■□□□ 1.35
RAB6A-208ENST00000541795 PSME1Q06323 249 aa23.48■■□□□ 1.35
RAB6A-208ENST00000541795 PAK3O75914 559 aaPredicted RBP23.47■■□□□ 1.35
RAB6A-208ENST00000541795 EMILIN1Q9Y6C2 1016 aa23.47■■□□□ 1.35
RAB6A-208ENST00000541795 CCDC146Q8IYE0 955 aa23.47■■□□□ 1.35
RAB6A-208ENST00000541795 NUDCQ9Y266 331 aa23.47■■□□□ 1.35
RAB6A-208ENST00000541795 RRS1Q15050 365 aaKnown RBP23.46■■□□□ 1.35
RAB6A-208ENST00000541795 FOXO3O43524 673 aa23.45■■□□□ 1.34
RAB6A-208ENST00000541795 DIAPH1O60610 1272 aaKnown RBP23.45■■□□□ 1.34
RAB6A-208ENST00000541795 ABTB2Q8N961 1025 aa23.45■■□□□ 1.34
RAB6A-208ENST00000541795 SALL2Q9Y467 1007 aaPredicted RBP23.45■■□□□ 1.34
RAB6A-208ENST00000541795 NLRP6P59044 892 aa23.44■■□□□ 1.34
RAB6A-208ENST00000541795 TRPM3Q9HCF6 1732 aaPredicted RBP23.43■■□□□ 1.34
RAB6A-208ENST00000541795 U2AF1L5P0DN76 240 aaPredicted RBP23.43■■□□□ 1.34
RAB6A-208ENST00000541795 U2AF1Q01081 240 aaKnown RBP eCLIP23.43■■□□□ 1.34
RAB6A-208ENST00000541795 U2SURPO15042 1029 aaKnown RBP23.41■■□□□ 1.34
RAB6A-208ENST00000541795 NUTM2GQ5VZR2 741 aa23.41■■□□□ 1.34
RAB6A-208ENST00000541795 PEAK1Q9H792 1746 aa23.41■■□□□ 1.34
RAB6A-208ENST00000541795 SOX12O15370 315 aa23.4■■□□□ 1.34
RAB6A-208ENST00000541795 XPCQ01831 940 aaPredicted RBP23.4■■□□□ 1.34
RAB6A-208ENST00000541795 RUNDC1Q96C34 613 aa23.39■■□□□ 1.33
RAB6A-208ENST00000541795 GTF3C3Q9Y5Q9 886 aa23.39■■□□□ 1.33
RAB6A-208ENST00000541795 APAF1O14727 1248 aa23.38■■□□□ 1.33
RAB6A-208ENST00000541795 KRT28Q7Z3Y7 464 aa23.38■■□□□ 1.33
RAB6A-208ENST00000541795 IQSEC2Q5JU85 1478 aa23.36■■□□□ 1.33
RAB6A-208ENST00000541795 PDE3BQ13370 1112 aa23.36■■□□□ 1.33
RAB6A-208ENST00000541795 MAP3K19Q56UN5 1328 aa23.35■■□□□ 1.33
RAB6A-208ENST00000541795 IL13P35225 146 aa23.35■■□□□ 1.33
RAB6A-208ENST00000541795 ALS2Q96Q42 1657 aa23.35■■□□□ 1.33
RAB6A-208ENST00000541795 SBNO1A3KN83 1393 aa23.34■■□□□ 1.33
RAB6A-208ENST00000541795 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.33
RAB6A-208ENST00000541795 NGEFQ8N5V2 710 aa23.33■■□□□ 1.33
RAB6A-208ENST00000541795 FLT4P35916 1363 aa23.33■■□□□ 1.32
RAB6A-208ENST00000541795 LTN1O94822 1766 aa23.32■■□□□ 1.32
RAB6A-208ENST00000541795 NFAT5O94916 1531 aa23.32■■□□□ 1.32
RAB6A-208ENST00000541795 ZNF521Q96K83 1311 aa23.31■■□□□ 1.32
RAB6A-208ENST00000541795 BRINP3Q76B58 766 aa23.31■■□□□ 1.32
RAB6A-208ENST00000541795 TCP11L2Q8N4U5 519 aa23.31■■□□□ 1.32
RAB6A-208ENST00000541795 DDX17Q92841 729 aaKnown RBP23.31■■□□□ 1.32
RAB6A-208ENST00000541795 PNNQ9H307 717 aaKnown RBP23.31■■□□□ 1.32
RAB6A-208ENST00000541795 SLAIN2Q9P270 581 aa23.31■■□□□ 1.32
RAB6A-208ENST00000541795 KIF24Q5T7B8 1368 aa23.3■■□□□ 1.32
RAB6A-208ENST00000541795 SLIT3O75094 1523 aa23.3■■□□□ 1.32
RAB6A-208ENST00000541795 AMPHP49418 695 aa23.3■■□□□ 1.32
RAB6A-208ENST00000541795 LMOD2Q6P5Q4 547 aa23.3■■□□□ 1.32
RAB6A-208ENST00000541795 PLEKHF1Q96S99 279 aa23.3■■□□□ 1.32
RAB6A-208ENST00000541795 PXDNQ92626 1479 aa23.29■■□□□ 1.32
RAB6A-208ENST00000541795 EIF4A2Q14240 407 aaKnown RBP23.29■■□□□ 1.32
RAB6A-208ENST00000541795 HSP90AB2PQ58FF8 381 aa23.29■■□□□ 1.32
RAB6A-208ENST00000541795 FCHSD2O94868 740 aa23.29■■□□□ 1.32
RAB6A-208ENST00000541795 MAPK8IP3Q9UPT6 1336 aa23.28■■□□□ 1.32
RAB6A-208ENST00000541795 LTBP4Q8N2S1 1624 aa23.28■■□□□ 1.32
RAB6A-208ENST00000541795 KCNH5Q8NCM2 988 aa23.28■■□□□ 1.32
RAB6A-208ENST00000541795 CDCA7LQ96GN5 454 aa23.28■■□□□ 1.32
RAB6A-208ENST00000541795 RSPH6AQ9H0K4 717 aa23.28■■□□□ 1.32
RAB6A-208ENST00000541795 RGPD1P0DJD0 1748 aa23.27■■□□□ 1.32
RAB6A-208ENST00000541795 USP19O94966 1318 aa23.27■■□□□ 1.32
RAB6A-208ENST00000541795 RTL1A6NKG5 1358 aa23.26■■□□□ 1.31
RAB6A-208ENST00000541795 TNS3Q68CZ2 1445 aa23.26■■□□□ 1.31
RAB6A-208ENST00000541795 RRP7AQ9Y3A4 280 aaKnown RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms