RNA–Protein interactions for RNA: ENST00000541616.1

CACNA2D4-214, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 4

Gene CACNA2D4, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-214ENST00000541616 CARD11Q9BXL7 1154 aa24.4■■□□□ 1.5
CACNA2D4-214ENST00000541616 PPIP5K1Q6PFW1 1433 aa24.39■■□□□ 1.5
CACNA2D4-214ENST00000541616 ABCA3Q99758 1704 aa24.38■■□□□ 1.49
CACNA2D4-214ENST00000541616 SLIT2O94813 1529 aa24.38■■□□□ 1.49
CACNA2D4-214ENST00000541616 RGS12O14924 1447 aa24.37■■□□□ 1.49
CACNA2D4-214ENST00000541616 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.36■■□□□ 1.49
CACNA2D4-214ENST00000541616 GJD4Q96KN9 370 aaPredicted RBP24.36■■□□□ 1.49
CACNA2D4-214ENST00000541616 RALGAPBQ86X10 1494 aa24.35■■□□□ 1.49
CACNA2D4-214ENST00000541616 CABP1Q9NZU7 370 aa24.34■■□□□ 1.49
CACNA2D4-214ENST00000541616 FAM83GA6ND36 823 aa24.33■■□□□ 1.49
CACNA2D4-214ENST00000541616 ABTB2Q8N961 1025 aa24.32■■□□□ 1.48
CACNA2D4-214ENST00000541616 NWD2Q9ULI1 1742 aa24.32■■□□□ 1.48
CACNA2D4-214ENST00000541616 PLCH1Q4KWH8 1693 aa24.31■■□□□ 1.48
CACNA2D4-214ENST00000541616 UPF1Q92900 1129 aaKnown RBP eCLIP24.31■■□□□ 1.48
CACNA2D4-214ENST00000541616 PCGF6Q9BYE7 350 aa24.31■■□□□ 1.48
CACNA2D4-214ENST00000541616 BRD4O60885 1362 aaPredicted RBP24.3■■□□□ 1.48
CACNA2D4-214ENST00000541616 NUTM2GQ5VZR2 741 aa24.3■■□□□ 1.48
CACNA2D4-214ENST00000541616 CCDC9Q9Y3X0 531 aaKnown RBP24.3■■□□□ 1.48
CACNA2D4-214ENST00000541616 VPS72Q15906 364 aa24.29■■□□□ 1.48
CACNA2D4-214ENST00000541616 PRDM11Q9NQV5 511 aa24.29■■□□□ 1.48
CACNA2D4-214ENST00000541616 SBNO2Q9Y2G9 1366 aa24.29■■□□□ 1.48
CACNA2D4-214ENST00000541616 BTG4Q9NY30 223 aa24.28■■□□□ 1.48
CACNA2D4-214ENST00000541616 COL14A1Q05707 1796 aaKnown RBP24.28■■□□□ 1.48
CACNA2D4-214ENST00000541616 ATAD2Q6PL18 1390 aa24.28■■□□□ 1.48
CACNA2D4-214ENST00000541616 CRYBG1Q9Y4K1 1723 aa24.27■■□□□ 1.48
CACNA2D4-214ENST00000541616 NLRP13Q86W25 1043 aa24.27■■□□□ 1.48
CACNA2D4-214ENST00000541616 ZNF692Q9BU19 519 aaPredicted RBP24.25■■□□□ 1.47
CACNA2D4-214ENST00000541616 CLSPNQ9HAW4 1339 aa24.25■■□□□ 1.47
CACNA2D4-214ENST00000541616 USP6P35125 1406 aa24.25■■□□□ 1.47
CACNA2D4-214ENST00000541616 GLI3P10071 1580 aa24.24■■□□□ 1.47
CACNA2D4-214ENST00000541616 PHRF1Q9P1Y6 1649 aaKnown RBP24.24■■□□□ 1.47
CACNA2D4-214ENST00000541616 ZC3H6P61129 1189 aaKnown RBP24.23■■□□□ 1.47
CACNA2D4-214ENST00000541616 KIAA0232Q92628 1395 aa24.23■■□□□ 1.47
CACNA2D4-214ENST00000541616 TIMELESSQ9UNS1 1208 aa24.21■■□□□ 1.47
CACNA2D4-214ENST00000541616 SLC24A1O60721 1099 aa24.2■■□□□ 1.46
CACNA2D4-214ENST00000541616 NLRP6P59044 892 aa24.2■■□□□ 1.46
CACNA2D4-214ENST00000541616 NRAPQ86VF7 1730 aa24.19■■□□□ 1.46
CACNA2D4-214ENST00000541616 USP19O94966 1318 aa24.19■■□□□ 1.46
CACNA2D4-214ENST00000541616 CHRNA2Q15822 529 aa24.19■■□□□ 1.46
CACNA2D4-214ENST00000541616 SEPT12Q8IYM1 358 aa24.18■■□□□ 1.46
CACNA2D4-214ENST00000541616 GCP02774 474 aa24.17■■□□□ 1.46
CACNA2D4-214ENST00000541616 ST20-MTHFSA0A0A6YYL1 179 aa24.16■■□□□ 1.46
CACNA2D4-214ENST00000541616 A0A0G2JS52 829 aa24.16■■□□□ 1.46
CACNA2D4-214ENST00000541616 ONECUT3O60422 494 aaPredicted RBP24.16■■□□□ 1.46
CACNA2D4-214ENST00000541616 MYT1Q01538 1121 aa24.16■■□□□ 1.46
CACNA2D4-214ENST00000541616 TMC1Q8TDI8 760 aa24.16■■□□□ 1.46
CACNA2D4-214ENST00000541616 SSH2Q76I76 1423 aa24.16■■□□□ 1.46
CACNA2D4-214ENST00000541616 AKAP12Q02952 1782 aa24.16■■□□□ 1.46
CACNA2D4-214ENST00000541616 NRKQ7Z2Y5 1582 aa24.16■■□□□ 1.46
CACNA2D4-214ENST00000541616 KTN1Q86UP2 1357 aaKnown RBP24.16■■□□□ 1.46
CACNA2D4-214ENST00000541616 TTC21BQ7Z4L5 1316 aa24.15■■□□□ 1.46
CACNA2D4-214ENST00000541616 PUS7Q96PZ0 661 aaKnown RBP24.15■■□□□ 1.46
CACNA2D4-214ENST00000541616 CPDO75976 1380 aa24.15■■□□□ 1.46
CACNA2D4-214ENST00000541616 TTC21AQ8NDW8 1320 aa24.14■■□□□ 1.46
CACNA2D4-214ENST00000541616 EVA1CP58658 441 aa24.14■■□□□ 1.45
CACNA2D4-214ENST00000541616 CPSF1Q10570 1443 aaKnown RBP24.14■■□□□ 1.45
CACNA2D4-214ENST00000541616 STRN4Q9NRL3 753 aa24.14■■□□□ 1.45
CACNA2D4-214ENST00000541616 SPATA31A5Q5VU36 1347 aa24.13■■□□□ 1.45
CACNA2D4-214ENST00000541616 SPATA31A7Q8IWB4 1347 aa24.13■■□□□ 1.45
CACNA2D4-214ENST00000541616 FAM98CQ17RN3 349 aaKnown RBP24.13■■□□□ 1.45
CACNA2D4-214ENST00000541616 HDGFL2Q7Z4V5 671 aaPredicted RBP24.13■■□□□ 1.45
CACNA2D4-214ENST00000541616 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
CACNA2D4-214ENST00000541616 ZBTB7CA1YPR0 619 aa24.1■■□□□ 1.45
CACNA2D4-214ENST00000541616 CCDC125Q86Z20 511 aa24.1■■□□□ 1.45
CACNA2D4-214ENST00000541616 TESK2Q96S53 571 aa24.1■■□□□ 1.45
CACNA2D4-214ENST00000541616 TERF2IPQ9NYB0 399 aa24.1■■□□□ 1.45
CACNA2D4-214ENST00000541616 PIK3C2AO00443 1686 aa24.1■■□□□ 1.45
CACNA2D4-214ENST00000541616 BRWD3Q6RI45 1802 aa24.1■■□□□ 1.45
CACNA2D4-214ENST00000541616 USP47Q96K76 1375 aa24.09■■□□□ 1.45
CACNA2D4-214ENST00000541616 KRT27Q7Z3Y8 459 aa24.09■■□□□ 1.45
CACNA2D4-214ENST00000541616 SLC12A5Q9H2X9 1139 aa24.09■■□□□ 1.45
CACNA2D4-214ENST00000541616 KCNH5Q8NCM2 988 aa24.08■■□□□ 1.45
CACNA2D4-214ENST00000541616 SLIT3O75094 1523 aa24.08■■□□□ 1.45
CACNA2D4-214ENST00000541616 SPATA31A1Q5TZJ5 1347 aa24.08■■□□□ 1.44
CACNA2D4-214ENST00000541616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.07■■□□□ 1.44
CACNA2D4-214ENST00000541616 MON2Q7Z3U7 1717 aa24.07■■□□□ 1.44
CACNA2D4-214ENST00000541616 CAMTA1Q9Y6Y1 1673 aa24.05■■□□□ 1.44
CACNA2D4-214ENST00000541616 NINLQ9Y2I6 1382 aa24.05■■□□□ 1.44
CACNA2D4-214ENST00000541616 TMF1P82094 1093 aa24.05■■□□□ 1.44
CACNA2D4-214ENST00000541616 USP35Q9P2H5 1018 aa24.04■■□□□ 1.44
CACNA2D4-214ENST00000541616 LMO7Q8WWI1 1683 aa24.04■■□□□ 1.44
CACNA2D4-214ENST00000541616 AATKQ6ZMQ8 1374 aa24.03■■□□□ 1.44
CACNA2D4-214ENST00000541616 CD163L1Q9NR16 1453 aa24.03■■□□□ 1.44
CACNA2D4-214ENST00000541616 SOX12O15370 315 aa24.02■■□□□ 1.44
CACNA2D4-214ENST00000541616 LARP1Q6PKG0 1096 aaKnown RBP24.02■■□□□ 1.44
CACNA2D4-214ENST00000541616 EDC4Q6P2E9 1401 aaKnown RBP24.01■■□□□ 1.43
CACNA2D4-214ENST00000541616 SF3B2Q13435 895 aaKnown RBP24.01■■□□□ 1.43
CACNA2D4-214ENST00000541616 CDCA8Q53HL2 280 aa24.01■■□□□ 1.43
CACNA2D4-214ENST00000541616 A0A1W2PP64 1363 aa24■■□□□ 1.43
CACNA2D4-214ENST00000541616 BLMP54132 1417 aaPredicted RBP24■■□□□ 1.43
CACNA2D4-214ENST00000541616 COL5A2P05997 1499 aaPredicted RBP24■■□□□ 1.43
CACNA2D4-214ENST00000541616 BARGINQ6ZT62 677 aa23.99■■□□□ 1.43
CACNA2D4-214ENST00000541616 ARHGEF25Q86VW2 580 aa23.99■■□□□ 1.43
CACNA2D4-214ENST00000541616 NME9Q86XW9 330 aa23.99■■□□□ 1.43
CACNA2D4-214ENST00000541616 TCP11L2Q8N4U5 519 aa23.99■■□□□ 1.43
CACNA2D4-214ENST00000541616 USP31Q70CQ4 1352 aa23.99■■□□□ 1.43
CACNA2D4-214ENST00000541616 THRAP3Q9Y2W1 955 aaKnown RBP23.98■■□□□ 1.43
CACNA2D4-214ENST00000541616 THSD7AQ9UPZ6 1657 aa23.98■■□□□ 1.43
CACNA2D4-214ENST00000541616 ZRANB1Q9UGI0 708 aa23.97■■□□□ 1.43
CACNA2D4-214ENST00000541616 CRB1P82279 1406 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms