RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 CDK19Q9BWU1 502 aa20.31■□□□□ 0.84
SUDS3-203ENST00000541591 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
SUDS3-203ENST00000541591 L3MBTL2Q969R5 705 aa20.3■□□□□ 0.84
SUDS3-203ENST00000541591 GJD4Q96KN9 370 aaPredicted RBP20.3■□□□□ 0.84
SUDS3-203ENST00000541591 NUTM2GQ5VZR2 741 aa20.28■□□□□ 0.84
SUDS3-203ENST00000541591 CCDC9Q9Y3X0 531 aaKnown RBP20.28■□□□□ 0.84
SUDS3-203ENST00000541591 ATAD2Q6PL18 1390 aa20.28■□□□□ 0.84
SUDS3-203ENST00000541591 FAM83GA6ND36 823 aa20.26■□□□□ 0.83
SUDS3-203ENST00000541591 NRKQ7Z2Y5 1582 aa20.25■□□□□ 0.83
SUDS3-203ENST00000541591 AKAP12Q02952 1782 aa20.25■□□□□ 0.83
SUDS3-203ENST00000541591 CENPJQ9HC77 1338 aaPredicted RBP20.24■□□□□ 0.83
SUDS3-203ENST00000541591 CABP2Q9NPB3 220 aa20.23■□□□□ 0.83
SUDS3-203ENST00000541591 ACEP12821 1306 aa20.23■□□□□ 0.83
SUDS3-203ENST00000541591 PPIP5K1Q6PFW1 1433 aa20.22■□□□□ 0.83
SUDS3-203ENST00000541591 RGPD5Q99666 1765 aa20.22■□□□□ 0.83
SUDS3-203ENST00000541591 SRPK2P78362 688 aaKnown RBP20.22■□□□□ 0.83
SUDS3-203ENST00000541591 BTG4Q9NY30 223 aa20.22■□□□□ 0.83
SUDS3-203ENST00000541591 VPS72Q15906 364 aa20.2■□□□□ 0.82
SUDS3-203ENST00000541591 PIK3C2AO00443 1686 aa20.19■□□□□ 0.82
SUDS3-203ENST00000541591 A0A0G2JS52 829 aa20.19■□□□□ 0.82
SUDS3-203ENST00000541591 MYT1Q01538 1121 aa20.19■□□□□ 0.82
SUDS3-203ENST00000541591 CHRNA2Q15822 529 aa20.19■□□□□ 0.82
SUDS3-203ENST00000541591 POLR3AO14802 1390 aaPredicted RBP20.19■□□□□ 0.82
SUDS3-203ENST00000541591 SEPT12Q8IYM1 358 aa20.18■□□□□ 0.82
SUDS3-203ENST00000541591 ROCK2O75116 1388 aaKnown RBP20.18■□□□□ 0.82
SUDS3-203ENST00000541591 KIAA0232Q92628 1395 aa20.18■□□□□ 0.82
SUDS3-203ENST00000541591 THSD7AQ9UPZ6 1657 aa20.17■□□□□ 0.82
SUDS3-203ENST00000541591 NBPF8Q3BBV2 869 aa20.17■□□□□ 0.82
SUDS3-203ENST00000541591 CCDC61Q9Y6R9 512 aa20.17■□□□□ 0.82
SUDS3-203ENST00000541591 ZC3H6P61129 1189 aaKnown RBP20.16■□□□□ 0.82
SUDS3-203ENST00000541591 PRDM11Q9NQV5 511 aa20.16■□□□□ 0.82
SUDS3-203ENST00000541591 LMO7Q8WWI1 1683 aa20.16■□□□□ 0.82
SUDS3-203ENST00000541591 FAM98CQ17RN3 349 aaKnown RBP20.15■□□□□ 0.82
SUDS3-203ENST00000541591 MON2Q7Z3U7 1717 aa20.14■□□□□ 0.81
SUDS3-203ENST00000541591 RGPD1P0DJD0 1748 aa20.13■□□□□ 0.81
SUDS3-203ENST00000541591 TNS1Q9HBL0 1735 aaKnown RBP20.13■□□□□ 0.81
SUDS3-203ENST00000541591 PLEKHG3A1L390 1219 aa20.13■□□□□ 0.81
SUDS3-203ENST00000541591 STRN4Q9NRL3 753 aa20.13■□□□□ 0.81
SUDS3-203ENST00000541591 WNK3Q9BYP7 1800 aa20.12■□□□□ 0.81
SUDS3-203ENST00000541591 FAM182BQ5T319 152 aa20.12■□□□□ 0.81
SUDS3-203ENST00000541591 ABTB2Q8N961 1025 aa20.12■□□□□ 0.81
SUDS3-203ENST00000541591 ZBTB7CA1YPR0 619 aa20.11■□□□□ 0.81
SUDS3-203ENST00000541591 CABP1Q9NZU7 370 aa20.11■□□□□ 0.81
SUDS3-203ENST00000541591 CAMTA1Q9Y6Y1 1673 aa20.1■□□□□ 0.81
SUDS3-203ENST00000541591 KRT27Q7Z3Y8 459 aa20.09■□□□□ 0.81
SUDS3-203ENST00000541591 DEFB132Q7Z7B7 95 aa20.09■□□□□ 0.81
SUDS3-203ENST00000541591 USP6P35125 1406 aa20.09■□□□□ 0.81
SUDS3-203ENST00000541591 COL18A1P39060 1754 aa20.08■□□□□ 0.81
SUDS3-203ENST00000541591 SPATA31A5Q5VU36 1347 aa20.08■□□□□ 0.81
SUDS3-203ENST00000541591 SPATA31A7Q8IWB4 1347 aa20.08■□□□□ 0.81
SUDS3-203ENST00000541591 BLMP54132 1417 aaPredicted RBP20.08■□□□□ 0.8
SUDS3-203ENST00000541591 USP35Q9P2H5 1018 aa20.07■□□□□ 0.8
SUDS3-203ENST00000541591 LTN1O94822 1766 aa20.07■□□□□ 0.8
SUDS3-203ENST00000541591 TONSLQ96HA7 1378 aa20.07■□□□□ 0.8
SUDS3-203ENST00000541591 EVC2Q86UK5 1308 aa20.06■□□□□ 0.8
SUDS3-203ENST00000541591 SLIT3O75094 1523 aa20.06■□□□□ 0.8
SUDS3-203ENST00000541591 USP19O94966 1318 aa20.05■□□□□ 0.8
SUDS3-203ENST00000541591 ONECUT3O60422 494 aaPredicted RBP20.05■□□□□ 0.8
SUDS3-203ENST00000541591 SSH2Q76I76 1423 aa20.04■□□□□ 0.8
SUDS3-203ENST00000541591 SPATA31A1Q5TZJ5 1347 aa20.02■□□□□ 0.8
SUDS3-203ENST00000541591 PARP4Q9UKK3 1724 aaKnown RBP20.02■□□□□ 0.8
SUDS3-203ENST00000541591 CARD11Q9BXL7 1154 aa20.02■□□□□ 0.8
SUDS3-203ENST00000541591 SBF2Q86WG5 1849 aa20.02■□□□□ 0.79
SUDS3-203ENST00000541591 SOX12O15370 315 aa20.01■□□□□ 0.79
SUDS3-203ENST00000541591 NLRP6P59044 892 aa20.01■□□□□ 0.79
SUDS3-203ENST00000541591 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
SUDS3-203ENST00000541591 LARP1Q6PKG0 1096 aaKnown RBP20.01■□□□□ 0.79
SUDS3-203ENST00000541591 NLRP13Q86W25 1043 aa20.01■□□□□ 0.79
SUDS3-203ENST00000541591 COL5A2P05997 1499 aaPredicted RBP20■□□□□ 0.79
SUDS3-203ENST00000541591 EVA1CP58658 441 aa20■□□□□ 0.79
SUDS3-203ENST00000541591 LRRC37A3O60309 1634 aa19.99■□□□□ 0.79
SUDS3-203ENST00000541591 CPDO75976 1380 aa19.99■□□□□ 0.79
SUDS3-203ENST00000541591 GCP02774 474 aa19.99■□□□□ 0.79
SUDS3-203ENST00000541591 SF3B2Q13435 895 aaKnown RBP19.99■□□□□ 0.79
SUDS3-203ENST00000541591 CCDC125Q86Z20 511 aa19.99■□□□□ 0.79
SUDS3-203ENST00000541591 USP54Q70EL1 1684 aa19.97■□□□□ 0.79
SUDS3-203ENST00000541591 ZRANB1Q9UGI0 708 aa19.97■□□□□ 0.79
SUDS3-203ENST00000541591 CD163L1Q9NR16 1453 aa19.96■□□□□ 0.79
SUDS3-203ENST00000541591 TTC21BQ7Z4L5 1316 aa19.96■□□□□ 0.79
SUDS3-203ENST00000541591 NFAT5O94916 1531 aa19.96■□□□□ 0.79
SUDS3-203ENST00000541591 KTN1Q86UP2 1357 aaKnown RBP19.95■□□□□ 0.79
SUDS3-203ENST00000541591 CPSF1Q10570 1443 aaKnown RBP19.94■□□□□ 0.78
SUDS3-203ENST00000541591 BRD4O60885 1362 aaPredicted RBP19.94■□□□□ 0.78
SUDS3-203ENST00000541591 RREB1Q92766 1687 aa19.94■□□□□ 0.78
SUDS3-203ENST00000541591 NUP188Q5SRE5 1749 aa19.93■□□□□ 0.78
SUDS3-203ENST00000541591 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.93■□□□□ 0.78
SUDS3-203ENST00000541591 TMC1Q8TDI8 760 aa19.93■□□□□ 0.78
SUDS3-203ENST00000541591 PEAK1Q9H792 1746 aa19.93■□□□□ 0.78
SUDS3-203ENST00000541591 RGPD2P0DJD1 1756 aa19.93■□□□□ 0.78
SUDS3-203ENST00000541591 EN1Q05925 392 aaPredicted RBP19.92■□□□□ 0.78
SUDS3-203ENST00000541591 SBNO2Q9Y2G9 1366 aa19.92■□□□□ 0.78
SUDS3-203ENST00000541591 KAT6BQ8WYB5 2073 aa19.91■□□□□ 0.78
SUDS3-203ENST00000541591 PSDA5PKW4 1024 aaPredicted RBP19.9■□□□□ 0.78
SUDS3-203ENST00000541591 TRIM37O94972 964 aa19.9■□□□□ 0.78
SUDS3-203ENST00000541591 BAG6P46379 1132 aa19.9■□□□□ 0.78
SUDS3-203ENST00000541591 TCP11L2Q8N4U5 519 aa19.9■□□□□ 0.78
SUDS3-203ENST00000541591 AXIN2Q9Y2T1 843 aa19.9■□□□□ 0.78
SUDS3-203ENST00000541591 CRB1P82279 1406 aa19.9■□□□□ 0.78
SUDS3-203ENST00000541591 NME9Q86XW9 330 aa19.89■□□□□ 0.77
SUDS3-203ENST00000541591 SLC12A5Q9H2X9 1139 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms