RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
PHACTR3-209ENST00000541461 SLC26A8Q96RN1 970 aa13.51□□□□□ -0.25
PHACTR3-209ENST00000541461 POLR3AO14802 1390 aaPredicted RBP13.5□□□□□ -0.25
PHACTR3-209ENST00000541461 RARSP54136 660 aaKnown RBP13.5□□□□□ -0.25
PHACTR3-209ENST00000541461 NINLQ9Y2I6 1382 aa13.49□□□□□ -0.25
PHACTR3-209ENST00000541461 RLBP1P12271 317 aa13.49□□□□□ -0.25
PHACTR3-209ENST00000541461 SLKQ9H2G2 1235 aaPredicted RBP13.49□□□□□ -0.25
PHACTR3-209ENST00000541461 PCDHB15Q9Y5E8 787 aa13.49□□□□□ -0.25
PHACTR3-209ENST00000541461 LMTK3Q96Q04 1460 aa13.49□□□□□ -0.25
PHACTR3-209ENST00000541461 MORC1Q86VD1 984 aa13.48□□□□□ -0.25
PHACTR3-209ENST00000541461 BCL2L13Q9BXK5 485 aa13.48□□□□□ -0.25
PHACTR3-209ENST00000541461 ALKQ9UM73 1620 aa13.48□□□□□ -0.25
PHACTR3-209ENST00000541461 NRXN3Q9Y4C0 1643 aa13.48□□□□□ -0.25
PHACTR3-209ENST00000541461 TCP11L2Q8N4U5 519 aa13.48□□□□□ -0.25
PHACTR3-209ENST00000541461 PLEKHG1Q9ULL1 1385 aa13.48□□□□□ -0.25
PHACTR3-209ENST00000541461 SAFB2Q14151 953 aaKnown RBP eCLIP13.47□□□□□ -0.25
PHACTR3-209ENST00000541461 BECN1Q14457 450 aa13.47□□□□□ -0.25
PHACTR3-209ENST00000541461 POGKQ9P215 609 aa13.47□□□□□ -0.25
PHACTR3-209ENST00000541461 ADGRB1O14514 1584 aa13.47□□□□□ -0.25
PHACTR3-209ENST00000541461 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
PHACTR3-209ENST00000541461 SHPRHQ149N8 1683 aa13.47□□□□□ -0.25
PHACTR3-209ENST00000541461 RUNDC1Q96C34 613 aa13.47□□□□□ -0.25
PHACTR3-209ENST00000541461 SLC12A5Q9H2X9 1139 aa13.47□□□□□ -0.25
PHACTR3-209ENST00000541461 METP08581 1390 aa13.47□□□□□ -0.25
PHACTR3-209ENST00000541461 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.25
PHACTR3-209ENST00000541461 PMFBP1Q8TBY8 1022 aa13.46□□□□□ -0.26
PHACTR3-209ENST00000541461 PDZRN3Q9UPQ7 1066 aa13.46□□□□□ -0.26
PHACTR3-209ENST00000541461 SETD1AO15047 1707 aaKnown RBP13.44□□□□□ -0.26
PHACTR3-209ENST00000541461 ADAMTS13Q76LX8 1427 aa13.44□□□□□ -0.26
PHACTR3-209ENST00000541461 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
PHACTR3-209ENST00000541461 PHF23Q9BUL5 403 aaPredicted RBP13.44□□□□□ -0.26
PHACTR3-209ENST00000541461 MTHFSP49914 203 aa13.43□□□□□ -0.26
PHACTR3-209ENST00000541461 ANTXR1Q9H6X2 564 aa13.43□□□□□ -0.26
PHACTR3-209ENST00000541461 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
PHACTR3-209ENST00000541461 WDR63Q8IWG1 891 aa13.42□□□□□ -0.26
PHACTR3-209ENST00000541461 TBC1D32Q96NH3 1257 aa13.42□□□□□ -0.26
PHACTR3-209ENST00000541461 YTHDC2Q9H6S0 1430 aaKnown RBP13.42□□□□□ -0.26
PHACTR3-209ENST00000541461 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
PHACTR3-209ENST00000541461 TBX22Q9Y458 520 aa13.42□□□□□ -0.26
PHACTR3-209ENST00000541461 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
PHACTR3-209ENST00000541461 SBNO2Q9Y2G9 1366 aa13.41□□□□□ -0.26
PHACTR3-209ENST00000541461 TBC1D2Q9BYX2 928 aa13.41□□□□□ -0.26
PHACTR3-209ENST00000541461 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
PHACTR3-209ENST00000541461 RWDD1Q9H446 243 aaPredicted RBP13.41□□□□□ -0.26
PHACTR3-209ENST00000541461 AAMPQ13685 434 aa13.4□□□□□ -0.26
PHACTR3-209ENST00000541461 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
PHACTR3-209ENST00000541461 PRAM1Q96QH2 718 aa13.4□□□□□ -0.26
PHACTR3-209ENST00000541461 MED14O60244 1454 aa13.4□□□□□ -0.26
PHACTR3-209ENST00000541461 ARHGEF28Q8N1W1 1705 aaKnown RBP13.39□□□□□ -0.27
PHACTR3-209ENST00000541461 FAM43AQ8N2R8 423 aa13.39□□□□□ -0.27
PHACTR3-209ENST00000541461 PTPRUQ92729 1446 aa13.39□□□□□ -0.27
PHACTR3-209ENST00000541461 MVPQ14764 893 aaKnown RBP13.38□□□□□ -0.27
PHACTR3-209ENST00000541461 CCDC27Q2M243 656 aa13.38□□□□□ -0.27
PHACTR3-209ENST00000541461 CFAP53Q96M91 514 aa13.38□□□□□ -0.27
PHACTR3-209ENST00000541461 QRICH2Q9H0J4 1663 aa13.38□□□□□ -0.27
PHACTR3-209ENST00000541461 U2AF1L5P0DN76 240 aaPredicted RBP13.38□□□□□ -0.27
PHACTR3-209ENST00000541461 U2AF1Q01081 240 aaKnown RBP eCLIP13.38□□□□□ -0.27
PHACTR3-209ENST00000541461 RBM33Q96EV2 1170 aaKnown RBP13.38□□□□□ -0.27
PHACTR3-209ENST00000541461 MINK1Q8N4C8 1332 aaPredicted RBP13.37□□□□□ -0.27
PHACTR3-209ENST00000541461 TSR2Q969E8 191 aaKnown RBP13.37□□□□□ -0.27
PHACTR3-209ENST00000541461 MYH16Q9H6N6 1097 aa13.37□□□□□ -0.27
PHACTR3-209ENST00000541461 AMOTL2Q9Y2J4 779 aa13.37□□□□□ -0.27
PHACTR3-209ENST00000541461 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
PHACTR3-209ENST00000541461 FTSJ3Q8IY81 847 aaKnown RBP13.36□□□□□ -0.27
PHACTR3-209ENST00000541461 ABCC11Q96J66 1382 aa13.35□□□□□ -0.27
PHACTR3-209ENST00000541461 DZIP1LQ8IYY4 767 aaKnown RBP13.35□□□□□ -0.27
PHACTR3-209ENST00000541461 DIP2AQ14689 1571 aa13.35□□□□□ -0.27
PHACTR3-209ENST00000541461 ROBO2Q9HCK4 1378 aa13.35□□□□□ -0.27
PHACTR3-209ENST00000541461 TULP1O00294 542 aaPredicted RBP13.35□□□□□ -0.27
PHACTR3-209ENST00000541461 KCNA6P17658 529 aa13.34□□□□□ -0.27
PHACTR3-209ENST00000541461 STRCQ7RTU9 1775 aa13.34□□□□□ -0.27
PHACTR3-209ENST00000541461 MFAP1P55081 439 aaKnown RBP13.34□□□□□ -0.27
PHACTR3-209ENST00000541461 EXOSC9Q06265 439 aaKnown RBP13.33□□□□□ -0.28
PHACTR3-209ENST00000541461 C22orf23Q9BZE7 217 aa13.33□□□□□ -0.28
PHACTR3-209ENST00000541461 PIK3R4Q99570 1358 aa13.33□□□□□ -0.28
PHACTR3-209ENST00000541461 L1TD1Q5T7N2 865 aaKnown RBP13.33□□□□□ -0.28
PHACTR3-209ENST00000541461 SMC4Q9NTJ3 1288 aa13.33□□□□□ -0.28
PHACTR3-209ENST00000541461 USP32Q8NFA0 1604 aa13.32□□□□□ -0.28
PHACTR3-209ENST00000541461 CABP2Q9NPB3 220 aa13.32□□□□□ -0.28
PHACTR3-209ENST00000541461 TRIM27P14373 513 aa13.31□□□□□ -0.28
PHACTR3-209ENST00000541461 MCM4P33991 863 aa13.31□□□□□ -0.28
PHACTR3-209ENST00000541461 GZF1Q9H116 711 aaPredicted RBP13.31□□□□□ -0.28
PHACTR3-209ENST00000541461 RRAGDQ9NQL2 400 aaPredicted RBP13.31□□□□□ -0.28
PHACTR3-209ENST00000541461 ITPRIPQ8IWB1 547 aa13.31□□□□□ -0.28
PHACTR3-209ENST00000541461 SSH1Q8WYL5 1049 aa13.31□□□□□ -0.28
PHACTR3-209ENST00000541461 TECPR2O15040 1411 aa13.31□□□□□ -0.28
PHACTR3-209ENST00000541461 NUTM2FA1L443 756 aa13.3□□□□□ -0.28
PHACTR3-209ENST00000541461 U2SURPO15042 1029 aaKnown RBP13.3□□□□□ -0.28
PHACTR3-209ENST00000541461 TULP4Q9NRJ4 1543 aa13.3□□□□□ -0.28
PHACTR3-209ENST00000541461 XRCC6P12956 609 aaKnown RBP eCLIP13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 HDAC1Q13547 482 aaPredicted RBP13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 SIRT1Q96EB6 747 aa13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 NOB1Q9ULX3 412 aaKnown RBP13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 TRIM35Q9UPQ4 493 aa13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 EVC2Q86UK5 1308 aa13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 ANKRD36BQ8N2N9 1353 aa13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 ADGRB2O60241 1585 aa13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
PHACTR3-209ENST00000541461 SRPK2P78362 688 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms