RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 CSPP1Q1MSJ5 1256 aa10.82□□□□□ -0.68
SUDS3-202ENST00000541280 CTC1Q2NKJ3 1217 aa10.82□□□□□ -0.68
SUDS3-202ENST00000541280 DDRGK1Q96HY6 314 aa10.81□□□□□ -0.68
SUDS3-202ENST00000541280 SIAH2O43255 324 aa10.8□□□□□ -0.68
SUDS3-202ENST00000541280 SH3D19Q5HYK7 790 aa10.8□□□□□ -0.68
SUDS3-202ENST00000541280 EIF4G1Q04637 1599 aaKnown RBP10.79□□□□□ -0.68
SUDS3-202ENST00000541280 CECR2Q9BXF3 1484 aa10.79□□□□□ -0.68
SUDS3-202ENST00000541280 ST8SIA5O15466 376 aa10.78□□□□□ -0.68
SUDS3-202ENST00000541280 SKIV2LQ15477 1246 aaKnown RBP10.78□□□□□ -0.68
SUDS3-202ENST00000541280 ZNF787Q6DD87 383 aa10.78□□□□□ -0.68
SUDS3-202ENST00000541280 ZNF511Q8NB15 262 aa10.78□□□□□ -0.68
SUDS3-202ENST00000541280 FAM117AQ9C073 453 aa10.78□□□□□ -0.68
SUDS3-202ENST00000541280 PLEKHG3A1L390 1219 aa10.77□□□□□ -0.69
SUDS3-202ENST00000541280 NUTM2BA6NNL0 878 aaPredicted RBP10.77□□□□□ -0.69
SUDS3-202ENST00000541280 NUTM2EB1AL46 878 aaPredicted RBP10.77□□□□□ -0.69
SUDS3-202ENST00000541280 J3QL48 77 aa10.77□□□□□ -0.69
SUDS3-202ENST00000541280 RTL5Q5HYW3 569 aaPredicted RBP10.77□□□□□ -0.69
SUDS3-202ENST00000541280 NUTM2DQ5VT03 806 aaPredicted RBP10.77□□□□□ -0.69
SUDS3-202ENST00000541280 NUTM2AQ8IVF1 878 aaPredicted RBP10.77□□□□□ -0.69
SUDS3-202ENST00000541280 EHBP1Q8NDI1 1231 aa10.77□□□□□ -0.69
SUDS3-202ENST00000541280 BAP1Q92560 729 aa10.77□□□□□ -0.69
SUDS3-202ENST00000541280 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
SUDS3-202ENST00000541280 POLR3EQ9NVU0 708 aa10.76□□□□□ -0.69
SUDS3-202ENST00000541280 AXIN1O15169 862 aa10.75□□□□□ -0.69
SUDS3-202ENST00000541280 CTHP32929 405 aa10.75□□□□□ -0.69
SUDS3-202ENST00000541280 MPNDQ8N594 471 aa10.75□□□□□ -0.69
SUDS3-202ENST00000541280 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.75□□□□□ -0.69
SUDS3-202ENST00000541280 MAP10Q9P2G4 905 aa10.75□□□□□ -0.69
SUDS3-202ENST00000541280 CC2D2AQ9P2K1 1620 aa10.74□□□□□ -0.69
SUDS3-202ENST00000541280 LINC01559Q495D7 138 aa10.74□□□□□ -0.69
SUDS3-202ENST00000541280 HELBQ8NG08 1087 aaPredicted RBP10.74□□□□□ -0.69
SUDS3-202ENST00000541280 VARSP26640 1264 aaKnown RBP10.73□□□□□ -0.69
SUDS3-202ENST00000541280 PPP2R2DQ66LE6 453 aa10.73□□□□□ -0.69
SUDS3-202ENST00000541280 POTECB2RU33 542 aa10.71□□□□□ -0.69
SUDS3-202ENST00000541280 HPS1Q92902 700 aa10.71□□□□□ -0.69
SUDS3-202ENST00000541280 ALDH1A1P00352 501 aa10.7□□□□□ -0.7
SUDS3-202ENST00000541280 DACH1Q9UI36 760 aa10.7□□□□□ -0.7
SUDS3-202ENST00000541280 FBXO31Q5XUX0 539 aaPredicted RBP10.69□□□□□ -0.7
SUDS3-202ENST00000541280 PROCA1Q8NCQ7 364 aaPredicted RBP10.69□□□□□ -0.7
SUDS3-202ENST00000541280 ARMC2Q8NEN0 867 aa10.69□□□□□ -0.7
SUDS3-202ENST00000541280 TSC1Q92574 1164 aa10.69□□□□□ -0.7
SUDS3-202ENST00000541280 GOPCQ9HD26 462 aa10.69□□□□□ -0.7
SUDS3-202ENST00000541280 TLL2Q9Y6L7 1015 aa10.67□□□□□ -0.7
SUDS3-202ENST00000541280 CTDSPL2Q05D32 466 aa10.65□□□□□ -0.7
SUDS3-202ENST00000541280 SH3RF1Q7Z6J0 888 aa10.65□□□□□ -0.7
SUDS3-202ENST00000541280 BPHLQ86WA6 291 aaPredicted RBP10.65□□□□□ -0.7
SUDS3-202ENST00000541280 FAM174AQ8TBP5 190 aa10.65□□□□□ -0.7
SUDS3-202ENST00000541280 GPKOWQ92917 476 aaPredicted RBP eCLIP10.65□□□□□ -0.7
SUDS3-202ENST00000541280 FOXJ1Q92949 421 aa10.65□□□□□ -0.7
SUDS3-202ENST00000541280 CDK15Q96Q40 435 aa10.65□□□□□ -0.7
SUDS3-202ENST00000541280 ATP13A2Q9NQ11 1180 aa10.65□□□□□ -0.7
SUDS3-202ENST00000541280 WASF2Q9Y6W5 498 aa10.65□□□□□ -0.7
SUDS3-202ENST00000541280 NCAPD3P42695 1498 aa10.64□□□□□ -0.71
SUDS3-202ENST00000541280 C4orf48Q5BLP8 95 aa10.64□□□□□ -0.71
SUDS3-202ENST00000541280 NBPF14Q5TI25 921 aa10.64□□□□□ -0.71
SUDS3-202ENST00000541280 GMPR2Q9P2T1 348 aaKnown RBP10.64□□□□□ -0.71
SUDS3-202ENST00000541280 SH3BP5LQ7L8J4 393 aa10.63□□□□□ -0.71
SUDS3-202ENST00000541280 ZNF775Q96BV0 537 aaPredicted RBP10.63□□□□□ -0.71
SUDS3-202ENST00000541280 C1QTNF2Q9BXJ5 285 aa10.63□□□□□ -0.71
SUDS3-202ENST00000541280 NEUROD2Q15784 382 aa10.62□□□□□ -0.71
SUDS3-202ENST00000541280 ADH1CP00326 375 aa10.61□□□□□ -0.71
SUDS3-202ENST00000541280 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
SUDS3-202ENST00000541280 TRMT44Q8IYL2 757 aaKnown RBP10.6□□□□□ -0.71
SUDS3-202ENST00000541280 LRRN4Q8WUT4 740 aa10.6□□□□□ -0.71
SUDS3-202ENST00000541280 NNTQ13423 1086 aa10.59□□□□□ -0.71
SUDS3-202ENST00000541280 TRIM47Q96LD4 638 aa10.59□□□□□ -0.71
SUDS3-202ENST00000541280 SENP2Q9HC62 589 aa10.59□□□□□ -0.71
SUDS3-202ENST00000541280 ZC3H4Q9UPT8 1303 aaKnown RBP10.58□□□□□ -0.71
SUDS3-202ENST00000541280 ATAD2BQ9ULI0 1458 aa10.58□□□□□ -0.72
SUDS3-202ENST00000541280 AGERQ15109 404 aa10.58□□□□□ -0.72
SUDS3-202ENST00000541280 MAP4K5Q9Y4K4 846 aa10.58□□□□□ -0.72
SUDS3-202ENST00000541280 C11orf95C9JLR9 678 aaPredicted RBP10.57□□□□□ -0.72
SUDS3-202ENST00000541280 CAPN5O15484 640 aaPredicted RBP10.57□□□□□ -0.72
SUDS3-202ENST00000541280 RFC5P40937 340 aa10.57□□□□□ -0.72
SUDS3-202ENST00000541280 PDXDC2PQ6P474 469 aa10.57□□□□□ -0.72
SUDS3-202ENST00000541280 KLF16Q9BXK1 252 aaPredicted RBP10.57□□□□□ -0.72
SUDS3-202ENST00000541280 FKBPLQ9UIM3 349 aa10.57□□□□□ -0.72
SUDS3-202ENST00000541280 NR5A1Q13285 461 aa10.56□□□□□ -0.72
SUDS3-202ENST00000541280 TPRNQ4KMQ1 711 aa10.56□□□□□ -0.72
SUDS3-202ENST00000541280 KIFC2Q96AC6 838 aa10.56□□□□□ -0.72
SUDS3-202ENST00000541280 PCMTD1Q96MG8 357 aaPredicted RBP10.56□□□□□ -0.72
SUDS3-202ENST00000541280 BAZ1AQ9NRL2 1556 aaPredicted RBP10.56□□□□□ -0.72
SUDS3-202ENST00000541280 AP1G2O75843 785 aa10.55□□□□□ -0.72
SUDS3-202ENST00000541280 GRM5P41594 1212 aa10.55□□□□□ -0.72
SUDS3-202ENST00000541280 TIMP2P16035 220 aa10.54□□□□□ -0.72
SUDS3-202ENST00000541280 SMARCA2P51531 1590 aa10.54□□□□□ -0.72
SUDS3-202ENST00000541280 NR6A1Q15406 480 aa10.54□□□□□ -0.72
SUDS3-202ENST00000541280 TRIM46Q7Z4K8 759 aa10.54□□□□□ -0.72
SUDS3-202ENST00000541280 USP17L8P0C7I0 530 aa10.53□□□□□ -0.72
SUDS3-202ENST00000541280 IL27Q8NEV9 243 aa10.53□□□□□ -0.72
SUDS3-202ENST00000541280 ATP1B4Q9UN42 357 aaPredicted RBP10.53□□□□□ -0.72
SUDS3-202ENST00000541280 GPSM3Q9Y4H4 160 aa10.53□□□□□ -0.72
SUDS3-202ENST00000541280 SNRPBP14678 240 aaKnown RBP10.52□□□□□ -0.73
SUDS3-202ENST00000541280 TMEM259Q4ZIN3 620 aa10.52□□□□□ -0.73
SUDS3-202ENST00000541280 NR3C2P08235 984 aa10.51□□□□□ -0.73
SUDS3-202ENST00000541280 WDR4P57081 412 aaKnown RBP10.51□□□□□ -0.73
SUDS3-202ENST00000541280 ARID5BQ14865 1188 aa10.51□□□□□ -0.73
SUDS3-202ENST00000541280 ERFEQ4G0M1 354 aa10.51□□□□□ -0.73
SUDS3-202ENST00000541280 LCE2AQ5TA79 106 aaPredicted RBP10.51□□□□□ -0.73
SUDS3-202ENST00000541280 HMX1Q9NP08 348 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms