RNA–Protein interactions for RNA: ENST00000541233.1

CD27-202, Transcript of CD27 molecule, humanhuman

TSL 2

Gene CD27, Length 1,045 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD27-202ENST00000541233 CENPJQ9HC77 1338 aaPredicted RBP18.64■□□□□ 0.57
CD27-202ENST00000541233 TRPM1Q7Z4N2 1603 aa18.63■□□□□ 0.57
CD27-202ENST00000541233 PLEKHG3A1L390 1219 aa18.63■□□□□ 0.57
CD27-202ENST00000541233 FAM83GA6ND36 823 aa18.63■□□□□ 0.57
CD27-202ENST00000541233 ONECUT3O60422 494 aaPredicted RBP18.62■□□□□ 0.57
CD27-202ENST00000541233 CCDC125Q86Z20 511 aa18.62■□□□□ 0.57
CD27-202ENST00000541233 QRICH2Q9H0J4 1663 aa18.62■□□□□ 0.57
CD27-202ENST00000541233 PHRF1Q9P1Y6 1649 aaKnown RBP18.61■□□□□ 0.57
CD27-202ENST00000541233 PAK3O75914 559 aaPredicted RBP18.61■□□□□ 0.57
CD27-202ENST00000541233 ACEP12821 1306 aa18.6■□□□□ 0.57
CD27-202ENST00000541233 PLEKHG5O94827 1062 aa18.6■□□□□ 0.57
CD27-202ENST00000541233 BRD4O60885 1362 aaPredicted RBP18.59■□□□□ 0.57
CD27-202ENST00000541233 NBPF8Q3BBV2 869 aa18.59■□□□□ 0.57
CD27-202ENST00000541233 SEPT12Q8IYM1 358 aa18.58■□□□□ 0.56
CD27-202ENST00000541233 SIN3AQ96ST3 1273 aa18.58■□□□□ 0.56
CD27-202ENST00000541233 BTG4Q9NY30 223 aa18.58■□□□□ 0.56
CD27-202ENST00000541233 BRWD3Q6RI45 1802 aa18.58■□□□□ 0.56
CD27-202ENST00000541233 PPIP5K1Q6PFW1 1433 aa18.57■□□□□ 0.56
CD27-202ENST00000541233 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
CD27-202ENST00000541233 PRDM11Q9NQV5 511 aa18.56■□□□□ 0.56
CD27-202ENST00000541233 CCDC9Q9Y3X0 531 aaKnown RBP18.56■□□□□ 0.56
CD27-202ENST00000541233 BLMP54132 1417 aaPredicted RBP18.56■□□□□ 0.56
CD27-202ENST00000541233 ROCK2O75116 1388 aaKnown RBP18.55■□□□□ 0.56
CD27-202ENST00000541233 NRKQ7Z2Y5 1582 aa18.55■□□□□ 0.56
CD27-202ENST00000541233 KIAA0232Q92628 1395 aa18.54■□□□□ 0.56
CD27-202ENST00000541233 USP19O94966 1318 aa18.53■□□□□ 0.56
CD27-202ENST00000541233 NEUROD1Q13562 356 aa18.53■□□□□ 0.56
CD27-202ENST00000541233 SPATA31A5Q5VU36 1347 aa18.52■□□□□ 0.56
CD27-202ENST00000541233 SPATA31A7Q8IWB4 1347 aa18.52■□□□□ 0.56
CD27-202ENST00000541233 KRT27Q7Z3Y8 459 aa18.52■□□□□ 0.56
CD27-202ENST00000541233 CABP2Q9NPB3 220 aa18.52■□□□□ 0.56
CD27-202ENST00000541233 THSD7AQ9UPZ6 1657 aa18.52■□□□□ 0.56
CD27-202ENST00000541233 CPDO75976 1380 aa18.52■□□□□ 0.55
CD27-202ENST00000541233 EVC2Q86UK5 1308 aa18.51■□□□□ 0.55
CD27-202ENST00000541233 USP6P35125 1406 aa18.51■□□□□ 0.55
CD27-202ENST00000541233 ABTB2Q8N961 1025 aa18.5■□□□□ 0.55
CD27-202ENST00000541233 SBNO2Q9Y2G9 1366 aa18.5■□□□□ 0.55
CD27-202ENST00000541233 FAM98CQ17RN3 349 aaKnown RBP18.49■□□□□ 0.55
CD27-202ENST00000541233 LMO7Q8WWI1 1683 aa18.49■□□□□ 0.55
CD27-202ENST00000541233 NUTM2GQ5VZR2 741 aa18.48■□□□□ 0.55
CD27-202ENST00000541233 NLRP13Q86W25 1043 aa18.48■□□□□ 0.55
CD27-202ENST00000541233 SSH2Q76I76 1423 aa18.48■□□□□ 0.55
CD27-202ENST00000541233 SPATA31A1Q5TZJ5 1347 aa18.48■□□□□ 0.55
CD27-202ENST00000541233 ZC3H6P61129 1189 aaKnown RBP18.47■□□□□ 0.55
CD27-202ENST00000541233 CABP1Q9NZU7 370 aa18.47■□□□□ 0.55
CD27-202ENST00000541233 SLIT3O75094 1523 aa18.46■□□□□ 0.55
CD27-202ENST00000541233 A0A0G2JS52 829 aa18.46■□□□□ 0.55
CD27-202ENST00000541233 MYT1Q01538 1121 aa18.46■□□□□ 0.55
CD27-202ENST00000541233 CHRNA2Q15822 529 aa18.46■□□□□ 0.55
CD27-202ENST00000541233 SF3B2Q13435 895 aaKnown RBP18.45■□□□□ 0.54
CD27-202ENST00000541233 ZRANB1Q9UGI0 708 aa18.45■□□□□ 0.54
CD27-202ENST00000541233 CAMTA1Q9Y6Y1 1673 aa18.44■□□□□ 0.54
CD27-202ENST00000541233 GCP02774 474 aa18.44■□□□□ 0.54
CD27-202ENST00000541233 PIK3C2AO00443 1686 aa18.44■□□□□ 0.54
CD27-202ENST00000541233 TONSLQ96HA7 1378 aa18.43■□□□□ 0.54
CD27-202ENST00000541233 AKAP12Q02952 1782 aa18.43■□□□□ 0.54
CD27-202ENST00000541233 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
CD27-202ENST00000541233 BARGINQ6ZT62 677 aa18.42■□□□□ 0.54
CD27-202ENST00000541233 STRN4Q9NRL3 753 aa18.42■□□□□ 0.54
CD27-202ENST00000541233 CPSF1Q10570 1443 aaKnown RBP18.41■□□□□ 0.54
CD27-202ENST00000541233 RGPD1P0DJD0 1748 aa18.41■□□□□ 0.54
CD27-202ENST00000541233 COL5A2P05997 1499 aaPredicted RBP18.4■□□□□ 0.54
CD27-202ENST00000541233 CARD11Q9BXL7 1154 aa18.4■□□□□ 0.54
CD27-202ENST00000541233 TTC21AQ8NDW8 1320 aa18.4■□□□□ 0.54
CD27-202ENST00000541233 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
CD27-202ENST00000541233 DISP2A7MBM2 1401 aa18.4■□□□□ 0.54
CD27-202ENST00000541233 EVA1CP58658 441 aa18.39■□□□□ 0.53
CD27-202ENST00000541233 NLRP6P59044 892 aa18.39■□□□□ 0.53
CD27-202ENST00000541233 TRIM26Q12899 539 aaPredicted RBP18.39■□□□□ 0.53
CD27-202ENST00000541233 DEFB132Q7Z7B7 95 aa18.39■□□□□ 0.53
CD27-202ENST00000541233 THRAP3Q9Y2W1 955 aaKnown RBP18.39■□□□□ 0.53
CD27-202ENST00000541233 MON2Q7Z3U7 1717 aa18.38■□□□□ 0.53
CD27-202ENST00000541233 BAG6P46379 1132 aa18.38■□□□□ 0.53
CD27-202ENST00000541233 LARP1Q6PKG0 1096 aaKnown RBP18.37■□□□□ 0.53
CD27-202ENST00000541233 TCP11L2Q8N4U5 519 aa18.37■□□□□ 0.53
CD27-202ENST00000541233 TTC21BQ7Z4L5 1316 aa18.37■□□□□ 0.53
CD27-202ENST00000541233 TNS1Q9HBL0 1735 aaKnown RBP18.37■□□□□ 0.53
CD27-202ENST00000541233 CRB1P82279 1406 aa18.36■□□□□ 0.53
CD27-202ENST00000541233 SRCAPQ6ZRS2 3230 aa18.36■□□□□ 0.53
CD27-202ENST00000541233 COL18A1P39060 1754 aa18.35■□□□□ 0.53
CD27-202ENST00000541233 PARP4Q9UKK3 1724 aaKnown RBP18.35■□□□□ 0.53
CD27-202ENST00000541233 USP54Q70EL1 1684 aa18.35■□□□□ 0.53
CD27-202ENST00000541233 ABCC6O95255 1503 aa18.35■□□□□ 0.53
CD27-202ENST00000541233 KTN1Q86UP2 1357 aaKnown RBP18.35■□□□□ 0.53
CD27-202ENST00000541233 KCNH5Q8NCM2 988 aa18.35■□□□□ 0.53
CD27-202ENST00000541233 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
CD27-202ENST00000541233 FAM196AQ6ZSG2 479 aa18.34■□□□□ 0.53
CD27-202ENST00000541233 USP35Q9P2H5 1018 aa18.34■□□□□ 0.53
CD27-202ENST00000541233 NFAT5O94916 1531 aa18.33■□□□□ 0.53
CD27-202ENST00000541233 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.53
CD27-202ENST00000541233 FAM182BQ5T319 152 aa18.32■□□□□ 0.52
CD27-202ENST00000541233 USP31Q70CQ4 1352 aa18.31■□□□□ 0.52
CD27-202ENST00000541233 ARHGEF25Q86VW2 580 aa18.31■□□□□ 0.52
CD27-202ENST00000541233 C11orf95C9JLR9 678 aaPredicted RBP18.3■□□□□ 0.52
CD27-202ENST00000541233 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
CD27-202ENST00000541233 PDE3BQ13370 1112 aa18.3■□□□□ 0.52
CD27-202ENST00000541233 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
CD27-202ENST00000541233 NINLQ9Y2I6 1382 aa18.3■□□□□ 0.52
CD27-202ENST00000541233 WDR17Q8IZU2 1322 aa18.29■□□□□ 0.52
CD27-202ENST00000541233 EDC4Q6P2E9 1401 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms