RNA–Protein interactions for RNA: ENST00000541213.5

POLE-216, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 1,675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-216	ENST00000541213	TTC21A	Q8NDW8	1320 aa		30.16	■■■□□ 2.42
POLE-216	ENST00000541213	PPP2R1A	P30153	589 aa		30.15	■■■□□ 2.42
POLE-216	ENST00000541213	SSH2	Q76I76	1423 aa		30.14	■■■□□ 2.42
POLE-216	ENST00000541213	PSME1	Q06323	249 aa		30.14	■■■□□ 2.41
POLE-216	ENST00000541213	LTBP4	Q8N2S1	1624 aa		30.13	■■■□□ 2.41
POLE-216	ENST00000541213	CCDC184	Q52MB2	194 aa		30.12	■■■□□ 2.41
POLE-216	ENST00000541213	NME9	Q86XW9	330 aa		30.11	■■■□□ 2.41
POLE-216	ENST00000541213	FOXO3	O43524	673 aa		30.11	■■■□□ 2.41
POLE-216	ENST00000541213	SLAIN2	Q9P270	581 aa		30.11	■■■□□ 2.41
POLE-216	ENST00000541213	COG3	Q96JB2	828 aa		30.1	■■■□□ 2.41
POLE-216	ENST00000541213	TNNT2	P45379	298 aa	Predicted RBP	30.07	■■■□□ 2.4
POLE-216	ENST00000541213	NRK	Q7Z2Y5	1582 aa		30.06	■■■□□ 2.4
POLE-216	ENST00000541213	KIF1A	Q12756	1690 aa		30.05	■■■□□ 2.4
POLE-216	ENST00000541213	SCAF1	Q9H7N4	1312 aa	Known RBP	30.05	■■■□□ 2.4
POLE-216	ENST00000541213	PAK3	O75914	559 aa	Predicted RBP	30.04	■■■□□ 2.4
POLE-216	ENST00000541213	KIF20B	Q96Q89	1820 aa		30.03	■■■□□ 2.4
POLE-216	ENST00000541213	NPHP3	Q7Z494	1330 aa		30.02	■■■□□ 2.4
POLE-216	ENST00000541213	BRINP3	Q76B58	766 aa		30.02	■■■□□ 2.4
POLE-216	ENST00000541213	KRT28	Q7Z3Y7	464 aa		30.02	■■■□□ 2.4
POLE-216	ENST00000541213	ZRANB1	Q9UGI0	708 aa		30.02	■■■□□ 2.4
POLE-216	ENST00000541213	ABTB2	Q8N961	1025 aa		30.01	■■■□□ 2.4
POLE-216	ENST00000541213	USP31	Q70CQ4	1352 aa		30.01	■■■□□ 2.39
POLE-216	ENST00000541213	ANKRD26	Q9UPS8	1709 aa		30	■■■□□ 2.39
POLE-216	ENST00000541213	MTHFS	P49914	203 aa		29.98	■■■□□ 2.39
POLE-216	ENST00000541213	NLRP6	P59044	892 aa		29.98	■■■□□ 2.39
POLE-216	ENST00000541213	PNISR	Q8TF01	805 aa	Known RBP	29.98	■■■□□ 2.39
POLE-216	ENST00000541213	OVOS2	A0A0J9YW53	1432 aa		29.97	■■■□□ 2.39
POLE-216	ENST00000541213	OVOS2	Q6IE36	1432 aa		29.97	■■■□□ 2.39
POLE-216	ENST00000541213	AATK	Q6ZMQ8	1374 aa		29.96	■■■□□ 2.39
POLE-216	ENST00000541213	XPC	Q01831	940 aa	Predicted RBP	29.96	■■■□□ 2.39
POLE-216	ENST00000541213	FAM9B	Q8IZU0	186 aa		29.95	■■■□□ 2.39
POLE-216	ENST00000541213	CFAP53	Q96M91	514 aa		29.94	■■■□□ 2.38
POLE-216	ENST00000541213	DDX17	Q92841	729 aa	Known RBP	29.91	■■■□□ 2.38
POLE-216	ENST00000541213	SBNO1	A3KN83	1393 aa		29.91	■■■□□ 2.38
POLE-216	ENST00000541213	YTHDC1	Q96MU7	727 aa	Known RBP	29.9	■■■□□ 2.38
POLE-216	ENST00000541213	POLK	Q9UBT6	870 aa		29.9	■■■□□ 2.38
POLE-216	ENST00000541213	NUTM2G	Q5VZR2	741 aa		29.89	■■■□□ 2.38
POLE-216	ENST00000541213	PIK3C2A	O00443	1686 aa		29.88	■■■□□ 2.37
POLE-216	ENST00000541213	TOM1	O60784	492 aa		29.88	■■■□□ 2.37
POLE-216	ENST00000541213	FBLN1	P23142	703 aa		29.88	■■■□□ 2.37
POLE-216	ENST00000541213	LMOD2	Q6P5Q4	547 aa		29.87	■■■□□ 2.37
POLE-216	ENST00000541213	SOS2	Q07890	1332 aa	Predicted RBP	29.85	■■■□□ 2.37
POLE-216	ENST00000541213	WDR43	Q15061	677 aa	Known RBP eCLIP	29.85	■■■□□ 2.37
POLE-216	ENST00000541213	PXDN	Q92626	1479 aa		29.85	■■■□□ 2.37
POLE-216	ENST00000541213	KCNH5	Q8NCM2	988 aa		29.84	■■■□□ 2.37
POLE-216	ENST00000541213	PPM1G	O15355	546 aa	Predicted RBP	29.83	■■■□□ 2.37
POLE-216	ENST00000541213	RRS1	Q15050	365 aa	Known RBP	29.83	■■■□□ 2.37
POLE-216	ENST00000541213	TRPM3	Q9HCF6	1732 aa	Predicted RBP	29.83	■■■□□ 2.37
POLE-216	ENST00000541213	EMILIN1	Q9Y6C2	1016 aa		29.82	■■■□□ 2.36
POLE-216	ENST00000541213	PNPLA6	Q8IY17	1366 aa		29.82	■■■□□ 2.36
POLE-216	ENST00000541213	IQSEC2	Q5JU85	1478 aa		29.82	■■■□□ 2.36
POLE-216	ENST00000541213	SPATA31A3	Q5VYP0	1347 aa		29.82	■■■□□ 2.36
POLE-216	ENST00000541213	SMG6	Q86US8	1419 aa	Known RBP	29.81	■■■□□ 2.36
POLE-216	ENST00000541213	SOX12	O15370	315 aa		29.81	■■■□□ 2.36
POLE-216	ENST00000541213	INSR	P06213	1382 aa		29.81	■■■□□ 2.36
POLE-216	ENST00000541213	USP54	Q70EL1	1684 aa		29.81	■■■□□ 2.36
POLE-216	ENST00000541213	TNS3	Q68CZ2	1445 aa		29.8	■■■□□ 2.36
POLE-216	ENST00000541213	ARHGEF10	O15013	1369 aa		29.79	■■■□□ 2.36
POLE-216	ENST00000541213	NUDC	Q9Y266	331 aa		29.79	■■■□□ 2.36
POLE-216	ENST00000541213	CERK	Q8TCT0	537 aa		29.78	■■■□□ 2.36
POLE-216	ENST00000541213	ADAMTS8	Q9UP79	889 aa		29.77	■■■□□ 2.36
POLE-216	ENST00000541213	USP19	O94966	1318 aa		29.77	■■■□□ 2.36
POLE-216	ENST00000541213	DIAPH1	O60610	1272 aa	Known RBP	29.76	■■■□□ 2.36
POLE-216	ENST00000541213	GC	P02774	474 aa		29.76	■■■□□ 2.36
POLE-216	ENST00000541213	MAP3K19	Q56UN5	1328 aa		29.75	■■■□□ 2.35
POLE-216	ENST00000541213	CDK12	Q9NYV4	1490 aa	Predicted RBP	29.75	■■■□□ 2.35
POLE-216	ENST00000541213	MAP2	P11137	1827 aa	Known RBP	29.74	■■■□□ 2.35
POLE-216	ENST00000541213	KIF24	Q5T7B8	1368 aa		29.74	■■■□□ 2.35
POLE-216	ENST00000541213	ALS2	Q96Q42	1657 aa		29.74	■■■□□ 2.35
POLE-216	ENST00000541213	UBAP1L	F5GYI3	381 aa		29.73	■■■□□ 2.35
POLE-216	ENST00000541213	AMPH	P49418	695 aa		29.72	■■■□□ 2.35
POLE-216	ENST00000541213	NHSL1	Q5SYE7	1610 aa		29.71	■■■□□ 2.35
POLE-216	ENST00000541213	ROBO1	Q9Y6N7	1651 aa		29.71	■■■□□ 2.35
POLE-216	ENST00000541213	MARF1	Q9Y4F3	1742 aa	Known RBP	29.71	■■■□□ 2.35
POLE-216	ENST00000541213	HNRNPU	Q00839	825 aa	Known RBP eCLIP	29.71	■■■□□ 2.35
POLE-216	ENST00000541213	COL3A1	P02461	1466 aa	Predicted RBP	29.71	■■■□□ 2.35
POLE-216	ENST00000541213	SLIT3	O75094	1523 aa		29.71	■■■□□ 2.35
POLE-216	ENST00000541213	LRRC59	Q96AG4	307 aa	Known RBP	29.7	■■■□□ 2.35
POLE-216	ENST00000541213	FLT4	P35916	1363 aa		29.69	■■■□□ 2.34
POLE-216	ENST00000541213	PIP4K2B	P78356	416 aa		29.69	■■■□□ 2.34
POLE-216	ENST00000541213	PLEKHG5	O94827	1062 aa		29.67	■■■□□ 2.34
POLE-216	ENST00000541213	AHDC1	Q5TGY3	1603 aa	Predicted RBP	29.67	■■■□□ 2.34
POLE-216	ENST00000541213	U2SURP	O15042	1029 aa	Known RBP	29.66	■■■□□ 2.34
POLE-216	ENST00000541213	U2AF1L5	P0DN76	240 aa	Predicted RBP	29.66	■■■□□ 2.34
POLE-216	ENST00000541213	U2AF1	Q01081	240 aa	Known RBP eCLIP	29.66	■■■□□ 2.34
POLE-216	ENST00000541213	NFAT5	O94916	1531 aa		29.66	■■■□□ 2.34
POLE-216	ENST00000541213	IL13	P35225	146 aa		29.66	■■■□□ 2.34
POLE-216	ENST00000541213	HSP90AB2P	Q58FF8	381 aa		29.66	■■■□□ 2.34
POLE-216	ENST00000541213	ARHGEF25	Q86VW2	580 aa		29.66	■■■□□ 2.34
POLE-216	ENST00000541213	RTL1	A6NKG5	1358 aa		29.65	■■■□□ 2.34
POLE-216	ENST00000541213	HOXC9	P31274	260 aa		29.64	■■■□□ 2.34
POLE-216	ENST00000541213	BLM	P54132	1417 aa	Predicted RBP	29.63	■■■□□ 2.33
POLE-216	ENST00000541213	MED1	Q15648	1581 aa	Predicted RBP	29.63	■■■□□ 2.33
POLE-216	ENST00000541213	IP6K1	Q92551	441 aa		29.63	■■■□□ 2.33
POLE-216	ENST00000541213	SHPRH	Q149N8	1683 aa		29.62	■■■□□ 2.33
POLE-216	ENST00000541213	CABLES1	Q8TDN4	633 aa		29.62	■■■□□ 2.33
POLE-216	ENST00000541213	EIF4A2	Q14240	407 aa	Known RBP	29.61	■■■□□ 2.33
POLE-216	ENST00000541213	PNN	Q9H307	717 aa	Known RBP	29.6	■■■□□ 2.33
POLE-216	ENST00000541213	PEAK1	Q9H792	1746 aa		29.59	■■■□□ 2.33
POLE-216	ENST00000541213	ZBTB7C	A1YPR0	619 aa		29.59	■■■□□ 2.33

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms