RNA–Protein interactions for RNA: ENST00000541020.1

NLRC5-220, Transcript of NLR family CARD domain containing 5, humanhuman

TSL 3

Gene NLRC5, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC5-220ENST00000541020 NGDNQ8NEJ9 315 aaKnown RBP20.35■□□□□ 0.85
NLRC5-220ENST00000541020 BTG4Q9NY30 223 aa20.35■□□□□ 0.85
NLRC5-220ENST00000541020 ATP7BP35670 1465 aa20.34■□□□□ 0.85
NLRC5-220ENST00000541020 DEFB132Q7Z7B7 95 aa20.33■□□□□ 0.85
NLRC5-220ENST00000541020 KRT27Q7Z3Y8 459 aa20.32■□□□□ 0.84
NLRC5-220ENST00000541020 HRCP23327 699 aa20.31■□□□□ 0.84
NLRC5-220ENST00000541020 FAM98CQ17RN3 349 aaKnown RBP20.31■□□□□ 0.84
NLRC5-220ENST00000541020 NUDT16Q96DE0 195 aaKnown RBP20.31■□□□□ 0.84
NLRC5-220ENST00000541020 STAC3Q96MF2 364 aa20.31■□□□□ 0.84
NLRC5-220ENST00000541020 ONECUT3O60422 494 aaPredicted RBP20.3■□□□□ 0.84
NLRC5-220ENST00000541020 TOPAZ1Q8N9V7 1692 aa20.29■□□□□ 0.84
NLRC5-220ENST00000541020 PHRF1Q9P1Y6 1649 aaKnown RBP20.29■□□□□ 0.84
NLRC5-220ENST00000541020 SF3B2Q13435 895 aaKnown RBP20.29■□□□□ 0.84
NLRC5-220ENST00000541020 KIAA1210Q9ULL0 1709 aa20.28■□□□□ 0.84
NLRC5-220ENST00000541020 CDK19Q9BWU1 502 aa20.28■□□□□ 0.84
NLRC5-220ENST00000541020 NUTM2GQ5VZR2 741 aa20.26■□□□□ 0.83
NLRC5-220ENST00000541020 PRDM11Q9NQV5 511 aa20.26■□□□□ 0.83
NLRC5-220ENST00000541020 FAM182BQ5T319 152 aa20.25■□□□□ 0.83
NLRC5-220ENST00000541020 KIAA0232Q92628 1395 aa20.24■□□□□ 0.83
NLRC5-220ENST00000541020 CHRNA2Q15822 529 aa20.24■□□□□ 0.83
NLRC5-220ENST00000541020 SPATA31A5Q5VU36 1347 aa20.24■□□□□ 0.83
NLRC5-220ENST00000541020 SPATA31A7Q8IWB4 1347 aa20.24■□□□□ 0.83
NLRC5-220ENST00000541020 THSD7AQ9UPZ6 1657 aa20.23■□□□□ 0.83
NLRC5-220ENST00000541020 NBPF1Q3BBV0 1214 aa20.23■□□□□ 0.83
NLRC5-220ENST00000541020 ACEP12821 1306 aa20.23■□□□□ 0.83
NLRC5-220ENST00000541020 ZC3H6P61129 1189 aaKnown RBP20.21■□□□□ 0.83
NLRC5-220ENST00000541020 STRN4Q9NRL3 753 aa20.21■□□□□ 0.83
NLRC5-220ENST00000541020 RGPD1P0DJD0 1748 aa20.21■□□□□ 0.83
NLRC5-220ENST00000541020 POLR3AO14802 1390 aaPredicted RBP20.21■□□□□ 0.83
NLRC5-220ENST00000541020 NRKQ7Z2Y5 1582 aa20.2■□□□□ 0.82
NLRC5-220ENST00000541020 NBPF8Q3BBV2 869 aa20.19■□□□□ 0.82
NLRC5-220ENST00000541020 CCDC61Q9Y6R9 512 aa20.19■□□□□ 0.82
NLRC5-220ENST00000541020 QRICH2Q9H0J4 1663 aa20.19■□□□□ 0.82
NLRC5-220ENST00000541020 BAG6P46379 1132 aa20.18■□□□□ 0.82
NLRC5-220ENST00000541020 TNS1Q9HBL0 1735 aaKnown RBP20.17■□□□□ 0.82
NLRC5-220ENST00000541020 SPATA31A1Q5TZJ5 1347 aa20.17■□□□□ 0.82
NLRC5-220ENST00000541020 PSDA5PKW4 1024 aaPredicted RBP20.16■□□□□ 0.82
NLRC5-220ENST00000541020 SRPK2P78362 688 aaKnown RBP20.16■□□□□ 0.82
NLRC5-220ENST00000541020 USP35Q9P2H5 1018 aa20.16■□□□□ 0.82
NLRC5-220ENST00000541020 PPIP5K1Q6PFW1 1433 aa20.16■□□□□ 0.82
NLRC5-220ENST00000541020 PLEKHG3A1L390 1219 aa20.15■□□□□ 0.82
NLRC5-220ENST00000541020 EN1Q05925 392 aaPredicted RBP20.15■□□□□ 0.82
NLRC5-220ENST00000541020 ABTB2Q8N961 1025 aa20.15■□□□□ 0.82
NLRC5-220ENST00000541020 CABP2Q9NPB3 220 aa20.15■□□□□ 0.82
NLRC5-220ENST00000541020 CENPJQ9HC77 1338 aaPredicted RBP20.15■□□□□ 0.82
NLRC5-220ENST00000541020 CAMTA1Q9Y6Y1 1673 aa20.13■□□□□ 0.81
NLRC5-220ENST00000541020 SSH2Q76I76 1423 aa20.12■□□□□ 0.81
NLRC5-220ENST00000541020 LMO7Q8WWI1 1683 aa20.12■□□□□ 0.81
NLRC5-220ENST00000541020 EVA1CP58658 441 aa20.11■□□□□ 0.81
NLRC5-220ENST00000541020 LRP5O75197 1615 aa20.11■□□□□ 0.81
NLRC5-220ENST00000541020 USP19O94966 1318 aa20.1■□□□□ 0.81
NLRC5-220ENST00000541020 ZBTB7CA1YPR0 619 aa20.09■□□□□ 0.81
NLRC5-220ENST00000541020 LARP1Q6PKG0 1096 aaKnown RBP20.09■□□□□ 0.81
NLRC5-220ENST00000541020 L3MBTL2Q969R5 705 aa20.09■□□□□ 0.81
NLRC5-220ENST00000541020 TRPM1Q7Z4N2 1603 aa20.09■□□□□ 0.81
NLRC5-220ENST00000541020 TRIM37O94972 964 aa20.08■□□□□ 0.81
NLRC5-220ENST00000541020 CPDO75976 1380 aa20.08■□□□□ 0.8
NLRC5-220ENST00000541020 NLRP13Q86W25 1043 aa20.07■□□□□ 0.8
NLRC5-220ENST00000541020 SIN3AQ96ST3 1273 aa20.07■□□□□ 0.8
NLRC5-220ENST00000541020 DISP2A7MBM2 1401 aa20.06■□□□□ 0.8
NLRC5-220ENST00000541020 GCP02774 474 aa20.06■□□□□ 0.8
NLRC5-220ENST00000541020 EZH2Q15910 746 aaKnown RBP20.06■□□□□ 0.8
NLRC5-220ENST00000541020 CABP1Q9NZU7 370 aa20.06■□□□□ 0.8
NLRC5-220ENST00000541020 USP6P35125 1406 aa20.05■□□□□ 0.8
NLRC5-220ENST00000541020 R3HDM1Q15032 1099 aaKnown RBP20.05■□□□□ 0.8
NLRC5-220ENST00000541020 FAM196AQ6ZSG2 479 aa20.05■□□□□ 0.8
NLRC5-220ENST00000541020 PIK3C2AO00443 1686 aa20.04■□□□□ 0.8
NLRC5-220ENST00000541020 PDE3BQ13370 1112 aa20.04■□□□□ 0.8
NLRC5-220ENST00000541020 BARGINQ6ZT62 677 aa20.04■□□□□ 0.8
NLRC5-220ENST00000541020 COL5A2P05997 1499 aaPredicted RBP20.04■□□□□ 0.8
NLRC5-220ENST00000541020 NEUROD1Q13562 356 aa20.03■□□□□ 0.8
NLRC5-220ENST00000541020 TCP11L2Q8N4U5 519 aa20.03■□□□□ 0.8
NLRC5-220ENST00000541020 APBA3O96018 575 aa20.02■□□□□ 0.8
NLRC5-220ENST00000541020 NLRP6P59044 892 aa20.02■□□□□ 0.8
NLRC5-220ENST00000541020 PARP4Q9UKK3 1724 aaKnown RBP20.02■□□□□ 0.79
NLRC5-220ENST00000541020 SLIT3O75094 1523 aa20.02■□□□□ 0.79
NLRC5-220ENST00000541020 CAMKK2Q96RR4 588 aa20.01■□□□□ 0.79
NLRC5-220ENST00000541020 BRD4O60885 1362 aaPredicted RBP20■□□□□ 0.79
NLRC5-220ENST00000541020 ROCK2O75116 1388 aaKnown RBP20■□□□□ 0.79
NLRC5-220ENST00000541020 RREB1Q92766 1687 aa20■□□□□ 0.79
NLRC5-220ENST00000541020 EVC2Q86UK5 1308 aa20■□□□□ 0.79
NLRC5-220ENST00000541020 AKAP12Q02952 1782 aa19.99■□□□□ 0.79
NLRC5-220ENST00000541020 NUP188Q5SRE5 1749 aa19.99■□□□□ 0.79
NLRC5-220ENST00000541020 CRB1P82279 1406 aa19.98■□□□□ 0.79
NLRC5-220ENST00000541020 COL18A1P39060 1754 aa19.98■□□□□ 0.79
NLRC5-220ENST00000541020 THRAP3Q9Y2W1 955 aaKnown RBP19.97■□□□□ 0.79
NLRC5-220ENST00000541020 RGPD5Q99666 1765 aa19.97■□□□□ 0.79
NLRC5-220ENST00000541020 LRRC37A3O60309 1634 aa19.97■□□□□ 0.79
NLRC5-220ENST00000541020 SOX12O15370 315 aa19.96■□□□□ 0.79
NLRC5-220ENST00000541020 WNK3Q9BYP7 1800 aa19.96■□□□□ 0.79
NLRC5-220ENST00000541020 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.79
NLRC5-220ENST00000541020 PEAK1Q9H792 1746 aa19.94■□□□□ 0.78
NLRC5-220ENST00000541020 PARD3Q8TEW0 1356 aa19.94■□□□□ 0.78
NLRC5-220ENST00000541020 TOM1L2Q6ZVM7 507 aa19.93■□□□□ 0.78
NLRC5-220ENST00000541020 AXIN2Q9Y2T1 843 aa19.93■□□□□ 0.78
NLRC5-220ENST00000541020 TTC21BQ7Z4L5 1316 aa19.93■□□□□ 0.78
NLRC5-220ENST00000541020 CPSF1Q10570 1443 aaKnown RBP19.93■□□□□ 0.78
NLRC5-220ENST00000541020 SBF2Q86WG5 1849 aa19.92■□□□□ 0.78
NLRC5-220ENST00000541020 OVOS2A0A0G2JMS6 1433 aa19.91■□□□□ 0.78
NLRC5-220ENST00000541020 OVOS2A0A0J9YW53 1432 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms