RNA–Protein interactions for RNA: ENST00000540870.5

SP110-215, Transcript of SP110 nuclear body protein, humanhuman

TSL 2 BASIC

Gene SP110, Length 2,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP110-215ENST00000540870 PARD3Q8TEW0 1356 aa11.47□□□□□ -0.57
SP110-215ENST00000540870 TNNT2P45379 298 aaPredicted RBP11.47□□□□□ -0.57
SP110-215ENST00000540870 MRS2Q9HD23 443 aa11.47□□□□□ -0.57
SP110-215ENST00000540870 LRRC7Q96NW7 1537 aa11.47□□□□□ -0.57
SP110-215ENST00000540870 NCOA3Q9Y6Q9 1424 aa11.47□□□□□ -0.57
SP110-215ENST00000540870 CADPS2Q86UW7 1296 aa11.47□□□□□ -0.57
SP110-215ENST00000540870 YTHDC1Q96MU7 727 aaKnown RBP11.47□□□□□ -0.57
SP110-215ENST00000540870 GGNBP2Q9H3C7 697 aa11.47□□□□□ -0.57
SP110-215ENST00000540870 PHF8Q9UPP1 1060 aa11.47□□□□□ -0.57
SP110-215ENST00000540870 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.57
SP110-215ENST00000540870 NPC1L1Q9UHC9 1359 aa11.46□□□□□ -0.57
SP110-215ENST00000540870 SALL2Q9Y467 1007 aaPredicted RBP11.46□□□□□ -0.57
SP110-215ENST00000540870 MON2Q7Z3U7 1717 aa11.46□□□□□ -0.58
SP110-215ENST00000540870 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
SP110-215ENST00000540870 EDC4Q6P2E9 1401 aaKnown RBP11.45□□□□□ -0.58
SP110-215ENST00000540870 ORAI2Q96SN7 254 aa11.45□□□□□ -0.58
SP110-215ENST00000540870 KIF20BQ96Q89 1820 aa11.45□□□□□ -0.58
SP110-215ENST00000540870 FYB1O15117 783 aa11.45□□□□□ -0.58
SP110-215ENST00000540870 PAK3O75914 559 aaPredicted RBP11.44□□□□□ -0.58
SP110-215ENST00000540870 PSME1Q06323 249 aa11.44□□□□□ -0.58
SP110-215ENST00000540870 NLRP13Q86W25 1043 aa11.44□□□□□ -0.58
SP110-215ENST00000540870 NSD2O96028 1365 aa11.44□□□□□ -0.58
SP110-215ENST00000540870 DCCP43146 1447 aa11.44□□□□□ -0.58
SP110-215ENST00000540870 C1orf167Q5SNV9 1468 aa11.43□□□□□ -0.58
SP110-215ENST00000540870 PPP2R1AP30153 589 aa11.43□□□□□ -0.58
SP110-215ENST00000540870 NME9Q86XW9 330 aa11.43□□□□□ -0.58
SP110-215ENST00000540870 POLR3AO14802 1390 aaPredicted RBP11.43□□□□□ -0.58
SP110-215ENST00000540870 USP6P35125 1406 aa11.43□□□□□ -0.58
SP110-215ENST00000540870 FOXO3O43524 673 aa11.43□□□□□ -0.58
SP110-215ENST00000540870 TTC21BQ7Z4L5 1316 aa11.43□□□□□ -0.58
SP110-215ENST00000540870 FAM9BQ8IZU0 186 aa11.42□□□□□ -0.58
SP110-215ENST00000540870 MST1RQ04912 1400 aa11.42□□□□□ -0.58
SP110-215ENST00000540870 ANKRD26Q9UPS8 1709 aa11.42□□□□□ -0.58
SP110-215ENST00000540870 XPCQ01831 940 aaPredicted RBP11.42□□□□□ -0.58
SP110-215ENST00000540870 COG3Q96JB2 828 aa11.42□□□□□ -0.58
SP110-215ENST00000540870 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
SP110-215ENST00000540870 BRD4O60885 1362 aaPredicted RBP11.41□□□□□ -0.58
SP110-215ENST00000540870 NRKQ7Z2Y5 1582 aa11.4□□□□□ -0.58
SP110-215ENST00000540870 TTC21AQ8NDW8 1320 aa11.4□□□□□ -0.59
SP110-215ENST00000540870 SLAIN2Q9P270 581 aa11.4□□□□□ -0.59
SP110-215ENST00000540870 NUTM2GQ5VZR2 741 aa11.39□□□□□ -0.59
SP110-215ENST00000540870 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
SP110-215ENST00000540870 ABTB2Q8N961 1025 aa11.39□□□□□ -0.59
SP110-215ENST00000540870 KIF1AQ12756 1690 aa11.39□□□□□ -0.59
SP110-215ENST00000540870 SOX12O15370 315 aa11.38□□□□□ -0.59
SP110-215ENST00000540870 KRT28Q7Z3Y7 464 aa11.38□□□□□ -0.59
SP110-215ENST00000540870 DDX17Q92841 729 aaKnown RBP11.38□□□□□ -0.59
SP110-215ENST00000540870 PPM1GO15355 546 aaPredicted RBP11.38□□□□□ -0.59
SP110-215ENST00000540870 FBLN1P23142 703 aa11.38□□□□□ -0.59
SP110-215ENST00000540870 MTHFSP49914 203 aa11.38□□□□□ -0.59
SP110-215ENST00000540870 NLRP6P59044 892 aa11.38□□□□□ -0.59
SP110-215ENST00000540870 LTBP4Q8N2S1 1624 aa11.38□□□□□ -0.59
SP110-215ENST00000540870 MAP2P11137 1827 aaKnown RBP11.38□□□□□ -0.59
SP110-215ENST00000540870 PDIA4P13667 645 aaKnown RBP11.37□□□□□ -0.59
SP110-215ENST00000540870 SSH2Q76I76 1423 aa11.37□□□□□ -0.59
SP110-215ENST00000540870 BRINP3Q76B58 766 aa11.36□□□□□ -0.59
SP110-215ENST00000540870 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
SP110-215ENST00000540870 PIK3C2AO00443 1686 aa11.35□□□□□ -0.59
SP110-215ENST00000540870 KLHL34Q8N239 644 aa11.35□□□□□ -0.59
SP110-215ENST00000540870 PNISRQ8TF01 805 aaKnown RBP11.35□□□□□ -0.59
SP110-215ENST00000540870 CFAP53Q96M91 514 aa11.35□□□□□ -0.59
SP110-215ENST00000540870 WDR43Q15061 677 aaKnown RBP eCLIP11.35□□□□□ -0.59
SP110-215ENST00000540870 PDE4CQ08493 712 aa11.34□□□□□ -0.59
SP110-215ENST00000540870 RRS1Q15050 365 aaKnown RBP11.34□□□□□ -0.59
SP110-215ENST00000540870 PHF23Q9BUL5 403 aaPredicted RBP11.33□□□□□ -0.6
SP110-215ENST00000540870 OVOS2A0A0J9YW53 1432 aa11.33□□□□□ -0.6
SP110-215ENST00000540870 OVOS2Q6IE36 1432 aa11.33□□□□□ -0.6
SP110-215ENST00000540870 POLKQ9UBT6 870 aa11.33□□□□□ -0.6
SP110-215ENST00000540870 EMILIN1Q9Y6C2 1016 aa11.33□□□□□ -0.6
SP110-215ENST00000540870 HNRNPUQ00839 825 aaKnown RBP eCLIP11.32□□□□□ -0.6
SP110-215ENST00000540870 TRPM3Q9HCF6 1732 aaPredicted RBP11.32□□□□□ -0.6
SP110-215ENST00000540870 USP31Q70CQ4 1352 aa11.31□□□□□ -0.6
SP110-215ENST00000540870 CCDC136Q96JN2 1154 aa11.31□□□□□ -0.6
SP110-215ENST00000540870 SENP3-EIF4A1A0A087X0R7 540 aa11.31□□□□□ -0.6
SP110-215ENST00000540870 ZBTB7CA1YPR0 619 aa11.31□□□□□ -0.6
SP110-215ENST00000540870 PIP4K2BP78356 416 aa11.31□□□□□ -0.6
SP110-215ENST00000540870 AATKQ6ZMQ8 1374 aa11.3□□□□□ -0.6
SP110-215ENST00000540870 TOM1O60784 492 aa11.3□□□□□ -0.6
SP110-215ENST00000540870 ADAMTS8Q9UP79 889 aa11.3□□□□□ -0.6
SP110-215ENST00000540870 MARF1Q9Y4F3 1742 aaKnown RBP11.29□□□□□ -0.6
SP110-215ENST00000540870 ROBO1Q9Y6N7 1651 aa11.29□□□□□ -0.6
SP110-215ENST00000540870 SBNO1A3KN83 1393 aa11.29□□□□□ -0.6
SP110-215ENST00000540870 UBAP1LF5GYI3 381 aa11.29□□□□□ -0.6
SP110-215ENST00000540870 U2SURPO15042 1029 aaKnown RBP11.29□□□□□ -0.6
SP110-215ENST00000540870 DIAPH1O60610 1272 aaKnown RBP11.29□□□□□ -0.6
SP110-215ENST00000540870 AMPHP49418 695 aa11.29□□□□□ -0.6
SP110-215ENST00000540870 NUDCQ9Y266 331 aa11.29□□□□□ -0.6
SP110-215ENST00000540870 PXDNQ92626 1479 aa11.29□□□□□ -0.6
SP110-215ENST00000540870 KCNH5Q8NCM2 988 aa11.28□□□□□ -0.6
SP110-215ENST00000540870 ALS2Q96Q42 1657 aa11.28□□□□□ -0.6
SP110-215ENST00000540870 TNS3Q68CZ2 1445 aa11.28□□□□□ -0.6
SP110-215ENST00000540870 U2AF1L5P0DN76 240 aaPredicted RBP11.28□□□□□ -0.6
SP110-215ENST00000540870 U2AF1Q01081 240 aaKnown RBP eCLIP11.28□□□□□ -0.6
SP110-215ENST00000540870 MAP3K19Q56UN5 1328 aa11.28□□□□□ -0.6
SP110-215ENST00000540870 SPATA31A3Q5VYP0 1347 aa11.28□□□□□ -0.6
SP110-215ENST00000540870 USP54Q70EL1 1684 aa11.27□□□□□ -0.6
SP110-215ENST00000540870 GLIPR1L2Q4G1C9 344 aa11.27□□□□□ -0.61
SP110-215ENST00000540870 SOS2Q07890 1332 aaPredicted RBP11.27□□□□□ -0.61
SP110-215ENST00000540870 GCP02774 474 aa11.26□□□□□ -0.61
SP110-215ENST00000540870 CCDC146Q8IYE0 955 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms