RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 BAP1Q92560 729 aa9.78□□□□□ -0.84
SOX9-AS1-214ENST00000540802 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.77□□□□□ -0.85
SOX9-AS1-214ENST00000540802 AAASQ9NRG9 546 aa9.77□□□□□ -0.85
SOX9-AS1-214ENST00000540802 J3QL48 77 aa9.76□□□□□ -0.85
SOX9-AS1-214ENST00000540802 CTHP32929 405 aa9.76□□□□□ -0.85
SOX9-AS1-214ENST00000540802 PROCA1Q8NCQ7 364 aaPredicted RBP9.76□□□□□ -0.85
SOX9-AS1-214ENST00000540802 ZNF511Q8NB15 262 aa9.75□□□□□ -0.85
SOX9-AS1-214ENST00000540802 MAP10Q9P2G4 905 aa9.75□□□□□ -0.85
SOX9-AS1-214ENST00000540802 SMCPP49901 116 aaPredicted RBP9.74□□□□□ -0.85
SOX9-AS1-214ENST00000540802 CTC1Q2NKJ3 1217 aa9.74□□□□□ -0.85
SOX9-AS1-214ENST00000540802 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
SOX9-AS1-214ENST00000540802 FBXO31Q5XUX0 539 aaPredicted RBP9.74□□□□□ -0.85
SOX9-AS1-214ENST00000540802 PPP2R2DQ66LE6 453 aa9.74□□□□□ -0.85
SOX9-AS1-214ENST00000540802 EHBP1Q8NDI1 1231 aa9.74□□□□□ -0.85
SOX9-AS1-214ENST00000540802 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
SOX9-AS1-214ENST00000540802 TSC1Q92574 1164 aa9.74□□□□□ -0.85
SOX9-AS1-214ENST00000540802 ST8SIA5O15466 376 aa9.73□□□□□ -0.85
SOX9-AS1-214ENST00000540802 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
SOX9-AS1-214ENST00000540802 TPRNQ4KMQ1 711 aa9.72□□□□□ -0.85
SOX9-AS1-214ENST00000540802 ZNF787Q6DD87 383 aa9.72□□□□□ -0.85
SOX9-AS1-214ENST00000540802 VARSP26640 1264 aaKnown RBP9.71□□□□□ -0.86
SOX9-AS1-214ENST00000540802 CTDSPL2Q05D32 466 aa9.71□□□□□ -0.86
SOX9-AS1-214ENST00000540802 GOPCQ9HD26 462 aa9.71□□□□□ -0.86
SOX9-AS1-214ENST00000540802 AXIN1O15169 862 aa9.7□□□□□ -0.86
SOX9-AS1-214ENST00000540802 BRPF1P55201 1214 aaPredicted RBP9.7□□□□□ -0.86
SOX9-AS1-214ENST00000540802 MPNDQ8N594 471 aa9.7□□□□□ -0.86
SOX9-AS1-214ENST00000540802 HPS1Q92902 700 aa9.7□□□□□ -0.86
SOX9-AS1-214ENST00000540802 ALDH1A1P00352 501 aa9.69□□□□□ -0.86
SOX9-AS1-214ENST00000540802 DACH1Q9UI36 760 aa9.69□□□□□ -0.86
SOX9-AS1-214ENST00000540802 POTECB2RU33 542 aa9.68□□□□□ -0.86
SOX9-AS1-214ENST00000540802 ARMC2Q8NEN0 867 aa9.68□□□□□ -0.86
SOX9-AS1-214ENST00000540802 FOXJ1Q92949 421 aa9.68□□□□□ -0.86
SOX9-AS1-214ENST00000540802 IL27Q8NEV9 243 aa9.67□□□□□ -0.86
SOX9-AS1-214ENST00000540802 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
SOX9-AS1-214ENST00000540802 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
SOX9-AS1-214ENST00000540802 ATP1B4Q9UN42 357 aaPredicted RBP9.65□□□□□ -0.86
SOX9-AS1-214ENST00000540802 SH3RF1Q7Z6J0 888 aa9.64□□□□□ -0.87
SOX9-AS1-214ENST00000540802 BPHLQ86WA6 291 aaPredicted RBP9.64□□□□□ -0.87
SOX9-AS1-214ENST00000540802 FAM174AQ8TBP5 190 aa9.64□□□□□ -0.87
SOX9-AS1-214ENST00000540802 CDK15Q96Q40 435 aa9.64□□□□□ -0.87
SOX9-AS1-214ENST00000540802 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.87
SOX9-AS1-214ENST00000540802 PCMTD1Q96MG8 357 aaPredicted RBP9.63□□□□□ -0.87
SOX9-AS1-214ENST00000540802 TLL2Q9Y6L7 1015 aa9.63□□□□□ -0.87
SOX9-AS1-214ENST00000540802 WASF2Q9Y6W5 498 aa9.63□□□□□ -0.87
SOX9-AS1-214ENST00000540802 RFC5P40937 340 aa9.62□□□□□ -0.87
SOX9-AS1-214ENST00000540802 NBPF14Q5TI25 921 aa9.62□□□□□ -0.87
SOX9-AS1-214ENST00000540802 AP1G2O75843 785 aa9.61□□□□□ -0.87
SOX9-AS1-214ENST00000540802 SH3BP5LQ7L8J4 393 aa9.61□□□□□ -0.87
SOX9-AS1-214ENST00000540802 C1QTNF2Q9BXJ5 285 aa9.61□□□□□ -0.87
SOX9-AS1-214ENST00000540802 AGERQ15109 404 aa9.6□□□□□ -0.87
SOX9-AS1-214ENST00000540802 ATP13A2Q9NQ11 1180 aa9.6□□□□□ -0.87
SOX9-AS1-214ENST00000540802 GMPR2Q9P2T1 348 aaKnown RBP9.6□□□□□ -0.87
SOX9-AS1-214ENST00000540802 NR6A1Q15406 480 aa9.59□□□□□ -0.87
SOX9-AS1-214ENST00000540802 ADH1CP00326 375 aa9.58□□□□□ -0.88
SOX9-AS1-214ENST00000540802 NNTQ13423 1086 aa9.58□□□□□ -0.88
SOX9-AS1-214ENST00000540802 PDXDC2PQ6P474 469 aa9.58□□□□□ -0.88
SOX9-AS1-214ENST00000540802 FKBPLQ9UIM3 349 aa9.58□□□□□ -0.88
SOX9-AS1-214ENST00000540802 USP17L8P0C7I0 530 aa9.57□□□□□ -0.88
SOX9-AS1-214ENST00000540802 GRM5P41594 1212 aa9.57□□□□□ -0.88
SOX9-AS1-214ENST00000540802 TMEM259Q4ZIN3 620 aa9.57□□□□□ -0.88
SOX9-AS1-214ENST00000540802 TRMT44Q8IYL2 757 aaKnown RBP9.57□□□□□ -0.88
SOX9-AS1-214ENST00000540802 ZNF775Q96BV0 537 aaPredicted RBP9.57□□□□□ -0.88
SOX9-AS1-214ENST00000540802 KLF16Q9BXK1 252 aaPredicted RBP9.57□□□□□ -0.88
SOX9-AS1-214ENST00000540802 ZC3H4Q9UPT8 1303 aaKnown RBP9.56□□□□□ -0.88
SOX9-AS1-214ENST00000540802 CAPN5O15484 640 aaPredicted RBP9.56□□□□□ -0.88
SOX9-AS1-214ENST00000540802 HMX1Q9NP08 348 aaPredicted RBP9.56□□□□□ -0.88
SOX9-AS1-214ENST00000540802 C11orf95C9JLR9 678 aaPredicted RBP9.55□□□□□ -0.88
SOX9-AS1-214ENST00000540802 NR5A1Q13285 461 aa9.55□□□□□ -0.88
SOX9-AS1-214ENST00000540802 ARID5BQ14865 1188 aa9.55□□□□□ -0.88
SOX9-AS1-214ENST00000540802 EPS8L1Q8TE68 723 aa9.55□□□□□ -0.88
SOX9-AS1-214ENST00000540802 MAP4K5Q9Y4K4 846 aa9.55□□□□□ -0.88
SOX9-AS1-214ENST00000540802 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
SOX9-AS1-214ENST00000540802 MAGEB6P1A0A0J9YX57 407 aa9.53□□□□□ -0.88
SOX9-AS1-214ENST00000540802 ERFEQ4G0M1 354 aa9.53□□□□□ -0.88
SOX9-AS1-214ENST00000540802 TRIM47Q96LD4 638 aa9.53□□□□□ -0.88
SOX9-AS1-214ENST00000540802 NR3C2P08235 984 aa9.52□□□□□ -0.89
SOX9-AS1-214ENST00000540802 TIMP2P16035 220 aa9.52□□□□□ -0.89
SOX9-AS1-214ENST00000540802 TRIM46Q7Z4K8 759 aa9.52□□□□□ -0.89
SOX9-AS1-214ENST00000540802 OCSTAMPQ9BR26 566 aa9.52□□□□□ -0.89
SOX9-AS1-214ENST00000540802 ARHGAP9Q9BRR9 750 aa9.52□□□□□ -0.89
SOX9-AS1-214ENST00000540802 GPSM3Q9Y4H4 160 aa9.52□□□□□ -0.89
SOX9-AS1-214ENST00000540802 PRKCSHP14314 528 aaPredicted RBP9.51□□□□□ -0.89
SOX9-AS1-214ENST00000540802 TRIM34Q9BYJ4 488 aa9.51□□□□□ -0.89
SOX9-AS1-214ENST00000540802 SNRPBP14678 240 aaKnown RBP9.5□□□□□ -0.89
SOX9-AS1-214ENST00000540802 WDR4P57081 412 aaKnown RBP9.5□□□□□ -0.89
SOX9-AS1-214ENST00000540802 PTK2Q05397 1052 aa9.5□□□□□ -0.89
SOX9-AS1-214ENST00000540802 KIFC2Q96AC6 838 aa9.5□□□□□ -0.89
SOX9-AS1-214ENST00000540802 CARD14Q9BXL6 1004 aa9.5□□□□□ -0.89
SOX9-AS1-214ENST00000540802 VASH1Q7L8A9 365 aaPredicted RBP9.49□□□□□ -0.89
SOX9-AS1-214ENST00000540802 PNMA1Q8ND90 353 aa9.49□□□□□ -0.89
SOX9-AS1-214ENST00000540802 BMP1P13497 986 aa9.48□□□□□ -0.89
SOX9-AS1-214ENST00000540802 ZBTB33Q86T24 672 aa9.48□□□□□ -0.89
SOX9-AS1-214ENST00000540802 BANK1Q8NDB2 785 aa9.48□□□□□ -0.89
SOX9-AS1-214ENST00000540802 ZIC2O95409 532 aaPredicted RBP9.47□□□□□ -0.89
SOX9-AS1-214ENST00000540802 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
SOX9-AS1-214ENST00000540802 GJD4Q96KN9 370 aaPredicted RBP9.47□□□□□ -0.89
SOX9-AS1-214ENST00000540802 CDV3Q9UKY7 258 aaKnown RBP9.47□□□□□ -0.89
SOX9-AS1-214ENST00000540802 NISCHQ9Y2I1 1504 aa9.46□□□□□ -0.89
SOX9-AS1-214ENST00000540802 FSHRP23945 695 aa9.46□□□□□ -0.9
SOX9-AS1-214ENST00000540802 ADAM32Q8TC27 787 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms