RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	PPIP5K1	Q6PFW1	1433 aa		28.32	■■■□□ 2.12
RAP1B-222	ENST00000540781	BCL9L	Q86UU0	1499 aa		28.31	■■■□□ 2.12
RAP1B-222	ENST00000540781	ABCA3	Q99758	1704 aa		28.31	■■■□□ 2.12
RAP1B-222	ENST00000540781	ATRN	O75882	1429 aa		28.3	■■■□□ 2.12
RAP1B-222	ENST00000540781	SLIT2	O94813	1529 aa		28.28	■■■□□ 2.12
RAP1B-222	ENST00000540781	UNC5CL	Q8IV45	518 aa		28.27	■■■□□ 2.12
RAP1B-222	ENST00000540781	CABP1	Q9NZU7	370 aa		28.27	■■■□□ 2.12
RAP1B-222	ENST00000540781	RGS12	O14924	1447 aa		28.26	■■■□□ 2.11
RAP1B-222	ENST00000540781	FAM83G	A6ND36	823 aa		28.23	■■■□□ 2.11
RAP1B-222	ENST00000540781	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.23	■■■□□ 2.11
RAP1B-222	ENST00000540781	NUTM2G	Q5VZR2	741 aa		28.22	■■■□□ 2.11
RAP1B-222	ENST00000540781	GJD4	Q96KN9	370 aa	Predicted RBP	28.21	■■■□□ 2.11
RAP1B-222	ENST00000540781	SBNO2	Q9Y2G9	1366 aa		28.21	■■■□□ 2.11
RAP1B-222	ENST00000540781	CLSPN	Q9HAW4	1339 aa		28.2	■■■□□ 2.11
RAP1B-222	ENST00000540781	ABTB2	Q8N961	1025 aa		28.2	■■■□□ 2.1
RAP1B-222	ENST00000540781	CRYBG1	Q9Y4K1	1723 aa		28.2	■■■□□ 2.1
RAP1B-222	ENST00000540781	PLCH1	Q4KWH8	1693 aa		28.19	■■■□□ 2.1
RAP1B-222	ENST00000540781	BRD4	O60885	1362 aa	Predicted RBP	28.18	■■■□□ 2.1
RAP1B-222	ENST00000540781	NWD2	Q9ULI1	1742 aa		28.18	■■■□□ 2.1
RAP1B-222	ENST00000540781	ATAD2	Q6PL18	1390 aa		28.17	■■■□□ 2.1
RAP1B-222	ENST00000540781	USP6	P35125	1406 aa		28.16	■■■□□ 2.1
RAP1B-222	ENST00000540781	VPS72	Q15906	364 aa		28.15	■■■□□ 2.1
RAP1B-222	ENST00000540781	PRDM11	Q9NQV5	511 aa		28.15	■■■□□ 2.1
RAP1B-222	ENST00000540781	TIMELESS	Q9UNS1	1208 aa		28.15	■■■□□ 2.1
RAP1B-222	ENST00000540781	COL14A1	Q05707	1796 aa	Known RBP	28.14	■■■□□ 2.1
RAP1B-222	ENST00000540781	BTG4	Q9NY30	223 aa		28.14	■■■□□ 2.1
RAP1B-222	ENST00000540781	NLRP13	Q86W25	1043 aa		28.13	■■■□□ 2.09
RAP1B-222	ENST00000540781	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.13	■■■□□ 2.09
RAP1B-222	ENST00000540781	CCDC9	Q9Y3X0	531 aa	Known RBP	28.13	■■■□□ 2.09
RAP1B-222	ENST00000540781	PHRF1	Q9P1Y6	1649 aa	Known RBP	28.13	■■■□□ 2.09
RAP1B-222	ENST00000540781	ZNF692	Q9BU19	519 aa	Predicted RBP	28.12	■■■□□ 2.09
RAP1B-222	ENST00000540781	GLI3	P10071	1580 aa		28.11	■■■□□ 2.09
RAP1B-222	ENST00000540781	ZC3H6	P61129	1189 aa	Known RBP	28.11	■■■□□ 2.09
RAP1B-222	ENST00000540781	KIAA0232	Q92628	1395 aa		28.11	■■■□□ 2.09
RAP1B-222	ENST00000540781	USP19	O94966	1318 aa		28.1	■■■□□ 2.09
RAP1B-222	ENST00000540781	ST20-MTHFS	A0A0A6YYL1	179 aa		28.09	■■■□□ 2.09
RAP1B-222	ENST00000540781	CHRNA2	Q15822	529 aa		28.08	■■■□□ 2.09
RAP1B-222	ENST00000540781	CCER1	Q8TC90	406 aa	Predicted RBP	28.08	■■■□□ 2.09
RAP1B-222	ENST00000540781	SSH2	Q76I76	1423 aa		28.08	■■■□□ 2.09
RAP1B-222	ENST00000540781	NRAP	Q86VF7	1730 aa		28.07	■■■□□ 2.08
RAP1B-222	ENST00000540781	NLRP6	P59044	892 aa		28.07	■■■□□ 2.08
RAP1B-222	ENST00000540781	AKAP12	Q02952	1782 aa		28.06	■■■□□ 2.08
RAP1B-222	ENST00000540781	NRK	Q7Z2Y5	1582 aa		28.05	■■■□□ 2.08
RAP1B-222	ENST00000540781	TTC21B	Q7Z4L5	1316 aa		28.05	■■■□□ 2.08
RAP1B-222	ENST00000540781	TMC1	Q8TDI8	760 aa		28.05	■■■□□ 2.08
RAP1B-222	ENST00000540781	TESK2	Q96S53	571 aa		28.05	■■■□□ 2.08
RAP1B-222	ENST00000540781	CPSF1	Q10570	1443 aa	Known RBP	28.04	■■■□□ 2.08
RAP1B-222	ENST00000540781	KTN1	Q86UP2	1357 aa	Known RBP	28.04	■■■□□ 2.08
RAP1B-222	ENST00000540781	GC	P02774	474 aa		28.04	■■■□□ 2.08
RAP1B-222	ENST00000540781	PUS7	Q96PZ0	661 aa	Known RBP	28.03	■■■□□ 2.08
RAP1B-222	ENST00000540781	USP47	Q96K76	1375 aa		28.02	■■■□□ 2.08
RAP1B-222	ENST00000540781	SLC24A1	O60721	1099 aa		28.02	■■■□□ 2.08
RAP1B-222	ENST00000540781	CPD	O75976	1380 aa		28.01	■■■□□ 2.07
RAP1B-222	ENST00000540781	TTC21A	Q8NDW8	1320 aa		28.01	■■■□□ 2.07
RAP1B-222	ENST00000540781	SEPT12	Q8IYM1	358 aa		28.01	■■■□□ 2.07
RAP1B-222	ENST00000540781	ONECUT3	O60422	494 aa	Predicted RBP	28	■■■□□ 2.07
RAP1B-222	ENST00000540781	SLC12A5	Q9H2X9	1139 aa		28	■■■□□ 2.07
RAP1B-222	ENST00000540781	PIK3C2A	O00443	1686 aa		28	■■■□□ 2.07
RAP1B-222	ENST00000540781	STRN4	Q9NRL3	753 aa		27.99	■■■□□ 2.07
RAP1B-222	ENST00000540781	SPATA31A5	Q5VU36	1347 aa		27.98	■■■□□ 2.07
RAP1B-222	ENST00000540781	SPATA31A7	Q8IWB4	1347 aa		27.98	■■■□□ 2.07
RAP1B-222	ENST00000540781	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	27.98	■■■□□ 2.07
RAP1B-222	ENST00000540781	MON2	Q7Z3U7	1717 aa		27.97	■■■□□ 2.07
RAP1B-222	ENST00000540781	SLIT3	O75094	1523 aa		27.97	■■■□□ 2.07
RAP1B-222	ENST00000540781	CD163L1	Q9NR16	1453 aa		27.96	■■■□□ 2.07
RAP1B-222	ENST00000540781		A0A0G2JS52	829 aa		27.96	■■■□□ 2.07
RAP1B-222	ENST00000540781	EVA1C	P58658	441 aa		27.96	■■■□□ 2.07
RAP1B-222	ENST00000540781	MYT1	Q01538	1121 aa		27.96	■■■□□ 2.07
RAP1B-222	ENST00000540781	FAM98C	Q17RN3	349 aa	Known RBP	27.96	■■■□□ 2.07
RAP1B-222	ENST00000540781	ZBTB7C	A1YPR0	619 aa		27.95	■■■□□ 2.06
RAP1B-222	ENST00000540781	TERF2IP	Q9NYB0	399 aa		27.95	■■■□□ 2.06
RAP1B-222	ENST00000540781	BRWD3	Q6RI45	1802 aa		27.95	■■■□□ 2.06
RAP1B-222	ENST00000540781	TMF1	P82094	1093 aa		27.94	■■■□□ 2.06
RAP1B-222	ENST00000540781	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	27.94	■■■□□ 2.06
RAP1B-222	ENST00000540781	CAMTA1	Q9Y6Y1	1673 aa		27.93	■■■□□ 2.06
RAP1B-222	ENST00000540781	SPATA31A1	Q5TZJ5	1347 aa		27.92	■■■□□ 2.06
RAP1B-222	ENST00000540781	LMO7	Q8WWI1	1683 aa		27.91	■■■□□ 2.06
RAP1B-222	ENST00000540781	KCNH5	Q8NCM2	988 aa		27.91	■■■□□ 2.06
RAP1B-222	ENST00000540781		A0A1W2PP64	1363 aa		27.9	■■■□□ 2.06
RAP1B-222	ENST00000540781	NINL	Q9Y2I6	1382 aa		27.9	■■■□□ 2.06
RAP1B-222	ENST00000540781	SOX12	O15370	315 aa		27.89	■■■□□ 2.06
RAP1B-222	ENST00000540781	KRT27	Q7Z3Y8	459 aa		27.89	■■■□□ 2.06
RAP1B-222	ENST00000540781	ZRANB1	Q9UGI0	708 aa		27.89	■■■□□ 2.06
RAP1B-222	ENST00000540781	AATK	Q6ZMQ8	1374 aa		27.88	■■■□□ 2.05
RAP1B-222	ENST00000540781	EDC4	Q6P2E9	1401 aa	Known RBP	27.88	■■■□□ 2.05
RAP1B-222	ENST00000540781	LARP1	Q6PKG0	1096 aa	Known RBP	27.88	■■■□□ 2.05
RAP1B-222	ENST00000540781	NME9	Q86XW9	330 aa		27.88	■■■□□ 2.05
RAP1B-222	ENST00000540781	USP31	Q70CQ4	1352 aa		27.87	■■■□□ 2.05
RAP1B-222	ENST00000540781	USP35	Q9P2H5	1018 aa		27.86	■■■□□ 2.05
RAP1B-222	ENST00000540781	CDCA8	Q53HL2	280 aa		27.85	■■■□□ 2.05
RAP1B-222	ENST00000540781	ARHGEF25	Q86VW2	580 aa		27.85	■■■□□ 2.05
RAP1B-222	ENST00000540781	CCDC125	Q86Z20	511 aa		27.85	■■■□□ 2.05
RAP1B-222	ENST00000540781	COL5A2	P05997	1499 aa	Predicted RBP	27.83	■■■□□ 2.05
RAP1B-222	ENST00000540781	THSD7A	Q9UPZ6	1657 aa		27.82	■■■□□ 2.04
RAP1B-222	ENST00000540781	COL18A1	P39060	1754 aa		27.81	■■■□□ 2.04
RAP1B-222	ENST00000540781	NFAT5	O94916	1531 aa		27.81	■■■□□ 2.04
RAP1B-222	ENST00000540781	BARGIN	Q6ZT62	677 aa		27.8	■■■□□ 2.04
RAP1B-222	ENST00000540781	TCP11L2	Q8N4U5	519 aa		27.8	■■■□□ 2.04
RAP1B-222	ENST00000540781	AXIN2	Q9Y2T1	843 aa		27.8	■■■□□ 2.04
RAP1B-222	ENST00000540781	USP54	Q70EL1	1684 aa		27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms