RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 PSDA5PKW4 1024 aaPredicted RBP23.55■■□□□ 1.36
UBC-208ENST00000540700 HSPA5P11021 654 aaKnown RBP23.55■■□□□ 1.36
UBC-208ENST00000540700 KRT27Q7Z3Y8 459 aa23.55■■□□□ 1.36
UBC-208ENST00000540700 USP32Q8NFA0 1604 aa23.54■■□□□ 1.36
UBC-208ENST00000540700 SBNO2Q9Y2G9 1366 aa23.52■■□□□ 1.36
UBC-208ENST00000540700 BRWD3Q6RI45 1802 aa23.52■■□□□ 1.36
UBC-208ENST00000540700 PSME1Q06323 249 aa23.52■■□□□ 1.36
UBC-208ENST00000540700 PHF8Q9UPP1 1060 aa23.52■■□□□ 1.36
UBC-208ENST00000540700 TNS3Q68CZ2 1445 aa23.51■■□□□ 1.35
UBC-208ENST00000540700 FMN2Q9NZ56 1722 aa23.51■■□□□ 1.35
UBC-208ENST00000540700 WASLO00401 505 aaPredicted RBP23.5■■□□□ 1.35
UBC-208ENST00000540700 ONECUT3O60422 494 aaPredicted RBP23.5■■□□□ 1.35
UBC-208ENST00000540700 EIF4G2P78344 907 aaKnown RBP eCLIP23.5■■□□□ 1.35
UBC-208ENST00000540700 PRR36Q9H6K5 1346 aa23.49■■□□□ 1.35
UBC-208ENST00000540700 KIF1AQ12756 1690 aa23.48■■□□□ 1.35
UBC-208ENST00000540700 BAG6P46379 1132 aa23.48■■□□□ 1.35
UBC-208ENST00000540700 FAM83GA6ND36 823 aa23.47■■□□□ 1.35
UBC-208ENST00000540700 CDK19Q9BWU1 502 aa23.47■■□□□ 1.35
UBC-208ENST00000540700 FAM98CQ17RN3 349 aaKnown RBP23.46■■□□□ 1.35
UBC-208ENST00000540700 ATP7BP35670 1465 aa23.45■■□□□ 1.34
UBC-208ENST00000540700 CABP2Q9NPB3 220 aa23.45■■□□□ 1.34
UBC-208ENST00000540700 LRP5O75197 1615 aa23.44■■□□□ 1.34
UBC-208ENST00000540700 SBNO1A3KN83 1393 aa23.43■■□□□ 1.34
UBC-208ENST00000540700 PMFBP1Q8TBY8 1022 aa23.43■■□□□ 1.34
UBC-208ENST00000540700 ARHGEF10O15013 1369 aa23.42■■□□□ 1.34
UBC-208ENST00000540700 PLCH1Q4KWH8 1693 aa23.42■■□□□ 1.34
UBC-208ENST00000540700 EN1Q05925 392 aaPredicted RBP23.42■■□□□ 1.34
UBC-208ENST00000540700 FAM182BQ5T319 152 aa23.42■■□□□ 1.34
UBC-208ENST00000540700 EVC2Q86UK5 1308 aa23.41■■□□□ 1.34
UBC-208ENST00000540700 C11orf95C9JLR9 678 aaPredicted RBP23.41■■□□□ 1.34
UBC-208ENST00000540700 BTG4Q9NY30 223 aa23.41■■□□□ 1.34
UBC-208ENST00000540700 RGPD8O14715 1765 aaPredicted RBP23.41■■□□□ 1.34
UBC-208ENST00000540700 ANKARQ7Z5J8 1434 aa23.41■■□□□ 1.34
UBC-208ENST00000540700 TOPAZ1Q8N9V7 1692 aa23.39■■□□□ 1.34
UBC-208ENST00000540700 NUDT16Q96DE0 195 aaKnown RBP23.39■■□□□ 1.33
UBC-208ENST00000540700 NWD2Q9ULI1 1742 aa23.39■■□□□ 1.33
UBC-208ENST00000540700 SRPK2P78362 688 aaKnown RBP23.38■■□□□ 1.33
UBC-208ENST00000540700 R3HDM1Q15032 1099 aaKnown RBP23.38■■□□□ 1.33
UBC-208ENST00000540700 TMF1P82094 1093 aa23.35■■□□□ 1.33
UBC-208ENST00000540700 ABCA3Q99758 1704 aa23.33■■□□□ 1.33
UBC-208ENST00000540700 PPIP5K1Q6PFW1 1433 aa23.32■■□□□ 1.32
UBC-208ENST00000540700 CCDC61Q9Y6R9 512 aa23.31■■□□□ 1.32
UBC-208ENST00000540700 SPATA31A5Q5VU36 1347 aa23.31■■□□□ 1.32
UBC-208ENST00000540700 SPATA31A7Q8IWB4 1347 aa23.31■■□□□ 1.32
UBC-208ENST00000540700 EZH2Q15910 746 aaKnown RBP23.3■■□□□ 1.32
UBC-208ENST00000540700 ITSN1Q15811 1721 aa23.3■■□□□ 1.32
UBC-208ENST00000540700 PUS7Q96PZ0 661 aaKnown RBP23.29■■□□□ 1.32
UBC-208ENST00000540700 CABP1Q9NZU7 370 aa23.29■■□□□ 1.32
UBC-208ENST00000540700 KIF7Q2M1P5 1343 aa23.29■■□□□ 1.32
UBC-208ENST00000540700 MYOM1P52179 1685 aa23.28■■□□□ 1.32
UBC-208ENST00000540700 NRAPQ86VF7 1730 aa23.28■■□□□ 1.32
UBC-208ENST00000540700 CD163L1Q9NR16 1453 aa23.28■■□□□ 1.32
UBC-208ENST00000540700 PLEKHG3A1L390 1219 aa23.27■■□□□ 1.32
UBC-208ENST00000540700 SLC24A1O60721 1099 aa23.27■■□□□ 1.32
UBC-208ENST00000540700 PAK3O75914 559 aaPredicted RBP23.27■■□□□ 1.32
UBC-208ENST00000540700 SLC12A5Q9H2X9 1139 aa23.26■■□□□ 1.31
UBC-208ENST00000540700 PRDM11Q9NQV5 511 aa23.26■■□□□ 1.31
UBC-208ENST00000540700 WASHC2AQ641Q2 1341 aa23.26■■□□□ 1.31
UBC-208ENST00000540700 POLR3AO14802 1390 aaPredicted RBP23.26■■□□□ 1.31
UBC-208ENST00000540700 TRIM37O94972 964 aa23.25■■□□□ 1.31
UBC-208ENST00000540700 ACEP12821 1306 aa23.24■■□□□ 1.31
UBC-208ENST00000540700 RGPD1P0DJD0 1748 aa23.24■■□□□ 1.31
UBC-208ENST00000540700 CCDC7Q96M83 1385 aa23.24■■□□□ 1.31
UBC-208ENST00000540700 COL14A1Q05707 1796 aaKnown RBP23.24■■□□□ 1.31
UBC-208ENST00000540700 NGDNQ8NEJ9 315 aaKnown RBP23.23■■□□□ 1.31
UBC-208ENST00000540700 POLR3GLQ9BT43 218 aa23.23■■□□□ 1.31
UBC-208ENST00000540700 TMC1Q8TDI8 760 aa23.22■■□□□ 1.31
UBC-208ENST00000540700 CAMKK2Q96RR4 588 aa23.22■■□□□ 1.31
UBC-208ENST00000540700 STRN4Q9NRL3 753 aa23.22■■□□□ 1.31
UBC-208ENST00000540700 DISP2A7MBM2 1401 aa23.22■■□□□ 1.31
UBC-208ENST00000540700 CPSF1Q10570 1443 aaKnown RBP23.22■■□□□ 1.31
UBC-208ENST00000540700 TRPM3Q9HCF6 1732 aaPredicted RBP23.22■■□□□ 1.31
UBC-208ENST00000540700 APBA3O96018 575 aa23.21■■□□□ 1.31
UBC-208ENST00000540700 CHRNA2Q15822 529 aa23.21■■□□□ 1.31
UBC-208ENST00000540700 CDCA8Q53HL2 280 aa23.21■■□□□ 1.31
UBC-208ENST00000540700 SPATA31A1Q5TZJ5 1347 aa23.2■■□□□ 1.3
UBC-208ENST00000540700 FAM196AQ6ZSG2 479 aa23.2■■□□□ 1.3
UBC-208ENST00000540700 A0A1W2PP64 1363 aa23.19■■□□□ 1.3
UBC-208ENST00000540700 USP35Q9P2H5 1018 aa23.19■■□□□ 1.3
UBC-208ENST00000540700 AKAP12Q02952 1782 aa23.19■■□□□ 1.3
UBC-208ENST00000540700 KIAA0232Q92628 1395 aa23.18■■□□□ 1.3
UBC-208ENST00000540700 ALS2Q96Q42 1657 aa23.18■■□□□ 1.3
UBC-208ENST00000540700 THSD7AQ9UPZ6 1657 aa23.18■■□□□ 1.3
UBC-208ENST00000540700 SSH2Q76I76 1423 aa23.17■■□□□ 1.3
UBC-208ENST00000540700 USP6P35125 1406 aa23.16■■□□□ 1.3
UBC-208ENST00000540700 TNS1Q9HBL0 1735 aaKnown RBP23.16■■□□□ 1.3
UBC-208ENST00000540700 NINLQ9Y2I6 1382 aa23.16■■□□□ 1.3
UBC-208ENST00000540700 NRKQ7Z2Y5 1582 aa23.16■■□□□ 1.3
UBC-208ENST00000540700 ZC3H6P61129 1189 aaKnown RBP23.16■■□□□ 1.3
UBC-208ENST00000540700 NUTM2GQ5VZR2 741 aa23.16■■□□□ 1.3
UBC-208ENST00000540700 YY1P25490 414 aa23.15■■□□□ 1.3
UBC-208ENST00000540700 MON2Q7Z3U7 1717 aa23.15■■□□□ 1.3
UBC-208ENST00000540700 ANKRD36BQ8N2N9 1353 aa23.14■■□□□ 1.3
UBC-208ENST00000540700 PDE3BQ13370 1112 aa23.13■■□□□ 1.29
UBC-208ENST00000540700 EVA1CP58658 441 aa23.12■■□□□ 1.29
UBC-208ENST00000540700 CARD14Q9BXL6 1004 aa23.12■■□□□ 1.29
UBC-208ENST00000540700 KTN1Q86UP2 1357 aaKnown RBP23.12■■□□□ 1.29
UBC-208ENST00000540700 NBPF14Q5TI25 921 aa23.1■■□□□ 1.29
UBC-208ENST00000540700 PARD3Q8TEW0 1356 aa23.1■■□□□ 1.29
UBC-208ENST00000540700 HDGFL2Q7Z4V5 671 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms