RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 SHPRHQ149N8 1683 aa12.77□□□□□ -0.36
PAAF1-209ENST00000540659 C14orf37Q86TY3 774 aa12.77□□□□□ -0.37
PAAF1-209ENST00000540659 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.76□□□□□ -0.37
PAAF1-209ENST00000540659 PRR36Q9H6K5 1346 aa12.76□□□□□ -0.37
PAAF1-209ENST00000540659 BLMP54132 1417 aaPredicted RBP12.76□□□□□ -0.37
PAAF1-209ENST00000540659 FMN2Q9NZ56 1722 aa12.75□□□□□ -0.37
PAAF1-209ENST00000540659 ADAMTS8Q9UP79 889 aa12.75□□□□□ -0.37
PAAF1-209ENST00000540659 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
PAAF1-209ENST00000540659 FYB1O15117 783 aa12.73□□□□□ -0.37
PAAF1-209ENST00000540659 C19orf44Q9H6X5 657 aa12.73□□□□□ -0.37
PAAF1-209ENST00000540659 CCDC61Q9Y6R9 512 aa12.73□□□□□ -0.37
PAAF1-209ENST00000540659 MST1RQ04912 1400 aa12.72□□□□□ -0.37
PAAF1-209ENST00000540659 CPSF1Q10570 1443 aaKnown RBP12.72□□□□□ -0.37
PAAF1-209ENST00000540659 EDC4Q6P2E9 1401 aaKnown RBP12.72□□□□□ -0.37
PAAF1-209ENST00000540659 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
PAAF1-209ENST00000540659 HSPA1LP34931 641 aa12.72□□□□□ -0.37
PAAF1-209ENST00000540659 CCDC146Q8IYE0 955 aa12.72□□□□□ -0.37
PAAF1-209ENST00000540659 PHLPP1O60346 1717 aa12.71□□□□□ -0.37
PAAF1-209ENST00000540659 ATF3P18847 181 aa12.71□□□□□ -0.37
PAAF1-209ENST00000540659 MTHFSP49914 203 aa12.71□□□□□ -0.37
PAAF1-209ENST00000540659 CADPS2Q86UW7 1296 aa12.71□□□□□ -0.37
PAAF1-209ENST00000540659 CFAP53Q96M91 514 aa12.71□□□□□ -0.37
PAAF1-209ENST00000540659 MAP2P11137 1827 aaKnown RBP12.71□□□□□ -0.38
PAAF1-209ENST00000540659 NME9Q86XW9 330 aa12.7□□□□□ -0.38
PAAF1-209ENST00000540659 PMFBP1Q8TBY8 1022 aa12.7□□□□□ -0.38
PAAF1-209ENST00000540659 SLAIN2Q9P270 581 aa12.7□□□□□ -0.38
PAAF1-209ENST00000540659 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
PAAF1-209ENST00000540659 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
PAAF1-209ENST00000540659 INSRP06213 1382 aa12.69□□□□□ -0.38
PAAF1-209ENST00000540659 ACEP12821 1306 aa12.69□□□□□ -0.38
PAAF1-209ENST00000540659 NEFLP07196 543 aa12.69□□□□□ -0.38
PAAF1-209ENST00000540659 ZRANB1Q9UGI0 708 aa12.69□□□□□ -0.38
PAAF1-209ENST00000540659 COL16A1Q07092 1604 aaPredicted RBP12.69□□□□□ -0.38
PAAF1-209ENST00000540659 NHSL1Q5SYE7 1610 aa12.69□□□□□ -0.38
PAAF1-209ENST00000540659 C1orf167Q5SNV9 1468 aa12.68□□□□□ -0.38
PAAF1-209ENST00000540659 FKBP8Q14318 412 aa12.68□□□□□ -0.38
PAAF1-209ENST00000540659 ZNF692Q9BU19 519 aaPredicted RBP12.68□□□□□ -0.38
PAAF1-209ENST00000540659 NUDCQ9Y266 331 aa12.68□□□□□ -0.38
PAAF1-209ENST00000540659 SMG6Q86US8 1419 aaKnown RBP12.68□□□□□ -0.38
PAAF1-209ENST00000540659 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
PAAF1-209ENST00000540659 FBLN1P23142 703 aa12.66□□□□□ -0.38
PAAF1-209ENST00000540659 COG3Q96JB2 828 aa12.66□□□□□ -0.38
PAAF1-209ENST00000540659 USP6P35125 1406 aa12.65□□□□□ -0.38
PAAF1-209ENST00000540659 ANKARQ7Z5J8 1434 aa12.65□□□□□ -0.38
PAAF1-209ENST00000540659 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-209ENST00000540659 IRX6P78412 446 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-209ENST00000540659 BRINP3Q76B58 766 aa12.65□□□□□ -0.38
PAAF1-209ENST00000540659 NGDNQ8NEJ9 315 aaKnown RBP12.65□□□□□ -0.38
PAAF1-209ENST00000540659 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
PAAF1-209ENST00000540659 MED1Q15648 1581 aaPredicted RBP12.64□□□□□ -0.39
PAAF1-209ENST00000540659 TTC21BQ7Z4L5 1316 aa12.64□□□□□ -0.39
PAAF1-209ENST00000540659 APAF1O14727 1248 aa12.63□□□□□ -0.39
PAAF1-209ENST00000540659 U2SURPO15042 1029 aaKnown RBP12.63□□□□□ -0.39
PAAF1-209ENST00000540659 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
PAAF1-209ENST00000540659 KIF1AQ12756 1690 aa12.63□□□□□ -0.39
PAAF1-209ENST00000540659 PIK3C2AO00443 1686 aa12.62□□□□□ -0.39
PAAF1-209ENST00000540659 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
PAAF1-209ENST00000540659 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
PAAF1-209ENST00000540659 PDE3BQ13370 1112 aa12.61□□□□□ -0.39
PAAF1-209ENST00000540659 POLKQ9UBT6 870 aa12.61□□□□□ -0.39
PAAF1-209ENST00000540659 EMILIN1Q9Y6C2 1016 aa12.61□□□□□ -0.39
PAAF1-209ENST00000540659 SOX12O15370 315 aa12.6□□□□□ -0.39
PAAF1-209ENST00000540659 DIAPH1O60610 1272 aaKnown RBP12.6□□□□□ -0.39
PAAF1-209ENST00000540659 RRS1Q15050 365 aaKnown RBP12.6□□□□□ -0.39
PAAF1-209ENST00000540659 RUNDC1Q96C34 613 aa12.6□□□□□ -0.39
PAAF1-209ENST00000540659 ORAI2Q96SN7 254 aa12.6□□□□□ -0.39
PAAF1-209ENST00000540659 OVOS2A0A0J9YW53 1432 aa12.6□□□□□ -0.39
PAAF1-209ENST00000540659 OVOS2Q6IE36 1432 aa12.6□□□□□ -0.39
PAAF1-209ENST00000540659 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
PAAF1-209ENST00000540659 NEUROD2Q15784 382 aa12.59□□□□□ -0.39
PAAF1-209ENST00000540659 DDX17Q92841 729 aaKnown RBP12.59□□□□□ -0.39
PAAF1-209ENST00000540659 PHF8Q9UPP1 1060 aa12.59□□□□□ -0.39
PAAF1-209ENST00000540659 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
PAAF1-209ENST00000540659 SSH2Q76I76 1423 aa12.59□□□□□ -0.39
PAAF1-209ENST00000540659 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
PAAF1-209ENST00000540659 PAK3O75914 559 aaPredicted RBP12.58□□□□□ -0.4
PAAF1-209ENST00000540659 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
PAAF1-209ENST00000540659 PEAK1Q9H792 1746 aa12.58□□□□□ -0.4
PAAF1-209ENST00000540659 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.4
PAAF1-209ENST00000540659 AATKQ6ZMQ8 1374 aa12.57□□□□□ -0.4
PAAF1-209ENST00000540659 JCADQ9P266 1359 aa12.57□□□□□ -0.4
PAAF1-209ENST00000540659 NUTM2GQ5VZR2 741 aa12.57□□□□□ -0.4
PAAF1-209ENST00000540659 PXDNQ92626 1479 aa12.57□□□□□ -0.4
PAAF1-209ENST00000540659 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
PAAF1-209ENST00000540659 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
PAAF1-209ENST00000540659 TCP11L2Q8N4U5 519 aa12.56□□□□□ -0.4
PAAF1-209ENST00000540659 USP54Q70EL1 1684 aa12.56□□□□□ -0.4
PAAF1-209ENST00000540659 ZNF521Q96K83 1311 aa12.56□□□□□ -0.4
PAAF1-209ENST00000540659 MAPK8IP3Q9UPT6 1336 aa12.55□□□□□ -0.4
PAAF1-209ENST00000540659 LRP6O75581 1613 aa12.55□□□□□ -0.4
PAAF1-209ENST00000540659 NLRP6P59044 892 aa12.54□□□□□ -0.4
PAAF1-209ENST00000540659 LTN1O94822 1766 aa12.53□□□□□ -0.4
PAAF1-209ENST00000540659 COL22A1Q8NFW1 1626 aaPredicted RBP12.53□□□□□ -0.4
PAAF1-209ENST00000540659 HMOX1P09601 288 aa12.53□□□□□ -0.4
PAAF1-209ENST00000540659 PSME1Q06323 249 aa12.53□□□□□ -0.4
PAAF1-209ENST00000540659 ABTB2Q8N961 1025 aa12.53□□□□□ -0.4
PAAF1-209ENST00000540659 RCAN3Q9UKA8 241 aa12.53□□□□□ -0.4
PAAF1-209ENST00000540659 SOS2Q07890 1332 aaPredicted RBP12.53□□□□□ -0.4
PAAF1-209ENST00000540659 NPHP3Q7Z494 1330 aa12.53□□□□□ -0.4
PAAF1-209ENST00000540659 USP31Q70CQ4 1352 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms