RNA–Protein interactions for RNA: ENST00000540585.1

NHLRC4-202, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC4, Length 2,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-202ENST00000540585 FMN2Q9NZ56 1722 aa28.9■■■□□ 2.22
NHLRC4-202ENST00000540585 NOP58Q9Y2X3 529 aaKnown RBP28.89■■■□□ 2.22
NHLRC4-202ENST00000540585 CDCA7LQ96GN5 454 aa28.87■■■□□ 2.21
NHLRC4-202ENST00000540585 MSH6P52701 1360 aa28.87■■■□□ 2.21
NHLRC4-202ENST00000540585 DCCP43146 1447 aa28.86■■■□□ 2.21
NHLRC4-202ENST00000540585 CD163L1Q9NR16 1453 aa28.86■■■□□ 2.21
NHLRC4-202ENST00000540585 SHPRHQ149N8 1683 aa28.84■■■□□ 2.21
NHLRC4-202ENST00000540585 TNNT2P45379 298 aaPredicted RBP28.84■■■□□ 2.21
NHLRC4-202ENST00000540585 TERF2IPQ9NYB0 399 aa28.84■■■□□ 2.21
NHLRC4-202ENST00000540585 ATP7BP35670 1465 aa28.83■■■□□ 2.2
NHLRC4-202ENST00000540585 PRR36Q9H6K5 1346 aa28.82■■■□□ 2.2
NHLRC4-202ENST00000540585 NUTM2FA1L443 756 aa28.82■■■□□ 2.2
NHLRC4-202ENST00000540585 RCAN3Q9UKA8 241 aa28.82■■■□□ 2.2
NHLRC4-202ENST00000540585 RGPD8O14715 1765 aaPredicted RBP28.82■■■□□ 2.2
NHLRC4-202ENST00000540585 ATF3P18847 181 aa28.81■■■□□ 2.2
NHLRC4-202ENST00000540585 CCDC146Q8IYE0 955 aa28.81■■■□□ 2.2
NHLRC4-202ENST00000540585 ZNF521Q96K83 1311 aa28.79■■■□□ 2.2
NHLRC4-202ENST00000540585 NUDT16Q96DE0 195 aaKnown RBP28.79■■■□□ 2.2
NHLRC4-202ENST00000540585 ANKRD26Q9UPS8 1709 aa28.79■■■□□ 2.2
NHLRC4-202ENST00000540585 ANKARQ7Z5J8 1434 aa28.79■■■□□ 2.2
NHLRC4-202ENST00000540585 TOPAZ1Q8N9V7 1692 aa28.78■■■□□ 2.2
NHLRC4-202ENST00000540585 CADPS2Q86UW7 1296 aa28.78■■■□□ 2.2
NHLRC4-202ENST00000540585 MST1RQ04912 1400 aa28.77■■■□□ 2.2
NHLRC4-202ENST00000540585 RRP1P56182 461 aaKnown RBP28.77■■■□□ 2.2
NHLRC4-202ENST00000540585 HDGFL2Q7Z4V5 671 aaPredicted RBP28.76■■■□□ 2.19
NHLRC4-202ENST00000540585 MTHFSP49914 203 aa28.76■■■□□ 2.19
NHLRC4-202ENST00000540585 ITSN1Q15811 1721 aa28.75■■■□□ 2.19
NHLRC4-202ENST00000540585 CABP1Q9NZU7 370 aa28.74■■■□□ 2.19
NHLRC4-202ENST00000540585 C1orf167Q5SNV9 1468 aa28.74■■■□□ 2.19
NHLRC4-202ENST00000540585 CFAP53Q96M91 514 aa28.74■■■□□ 2.19
NHLRC4-202ENST00000540585 APAF1O14727 1248 aa28.73■■■□□ 2.19
NHLRC4-202ENST00000540585 CCDC61Q9Y6R9 512 aa28.73■■■□□ 2.19
NHLRC4-202ENST00000540585 IQSEC2Q5JU85 1478 aa28.72■■■□□ 2.19
NHLRC4-202ENST00000540585 KIF20BQ96Q89 1820 aa28.72■■■□□ 2.19
NHLRC4-202ENST00000540585 PPIP5K1Q6PFW1 1433 aa28.72■■■□□ 2.19
NHLRC4-202ENST00000540585 CERKQ8TCT0 537 aa28.72■■■□□ 2.19
NHLRC4-202ENST00000540585 B4GALNT3Q6L9W6 998 aa28.71■■■□□ 2.19
NHLRC4-202ENST00000540585 GOLGA2Q08379 1002 aa28.71■■■□□ 2.19
NHLRC4-202ENST00000540585 GGNBP2Q9H3C7 697 aa28.71■■■□□ 2.19
NHLRC4-202ENST00000540585 PAK3O75914 559 aaPredicted RBP28.7■■■□□ 2.19
NHLRC4-202ENST00000540585 FYB1O15117 783 aa28.7■■■□□ 2.18
NHLRC4-202ENST00000540585 NGEFQ8N5V2 710 aa28.7■■■□□ 2.18
NHLRC4-202ENST00000540585 SLAIN2Q9P270 581 aa28.68■■■□□ 2.18
NHLRC4-202ENST00000540585 DUSP27Q5VZP5 1158 aa28.67■■■□□ 2.18
NHLRC4-202ENST00000540585 ORAI2Q96SN7 254 aa28.66■■■□□ 2.18
NHLRC4-202ENST00000540585 ESCO1Q5FWF5 840 aa28.66■■■□□ 2.18
NHLRC4-202ENST00000540585 PLEKHG3A1L390 1219 aa28.65■■■□□ 2.18
NHLRC4-202ENST00000540585 SLFN5Q08AF3 891 aa28.63■■■□□ 2.17
NHLRC4-202ENST00000540585 PMFBP1Q8TBY8 1022 aa28.63■■■□□ 2.17
NHLRC4-202ENST00000540585 PHF8Q9UPP1 1060 aa28.63■■■□□ 2.17
NHLRC4-202ENST00000540585 RUNDC1Q96C34 613 aa28.62■■■□□ 2.17
NHLRC4-202ENST00000540585 CPSF1Q10570 1443 aaKnown RBP28.62■■■□□ 2.17
NHLRC4-202ENST00000540585 NBR1Q14596 966 aa28.62■■■□□ 2.17
NHLRC4-202ENST00000540585 KIF1AQ12756 1690 aa28.62■■■□□ 2.17
NHLRC4-202ENST00000540585 AKAP12Q02952 1782 aa28.61■■■□□ 2.17
NHLRC4-202ENST00000540585 IPO9Q96P70 1041 aaKnown RBP28.61■■■□□ 2.17
NHLRC4-202ENST00000540585 COL3A1P02461 1466 aaPredicted RBP28.61■■■□□ 2.17
NHLRC4-202ENST00000540585 ACEP12821 1306 aa28.6■■■□□ 2.17
NHLRC4-202ENST00000540585 TRMT2AQ8IZ69 625 aaKnown RBP28.6■■■□□ 2.17
NHLRC4-202ENST00000540585 BRINP3Q76B58 766 aa28.58■■■□□ 2.17
NHLRC4-202ENST00000540585 EDC4Q6P2E9 1401 aaKnown RBP28.58■■■□□ 2.17
NHLRC4-202ENST00000540585 TOM1O60784 492 aa28.57■■■□□ 2.16
NHLRC4-202ENST00000540585 UBAP1LF5GYI3 381 aa28.57■■■□□ 2.16
NHLRC4-202ENST00000540585 CCDC136Q96JN2 1154 aa28.57■■■□□ 2.16
NHLRC4-202ENST00000540585 MON2Q7Z3U7 1717 aa28.56■■■□□ 2.16
NHLRC4-202ENST00000540585 E9PSI1 815 aa28.56■■■□□ 2.16
NHLRC4-202ENST00000540585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.56■■■□□ 2.16
NHLRC4-202ENST00000540585 NGDNQ8NEJ9 315 aaKnown RBP28.56■■■□□ 2.16
NHLRC4-202ENST00000540585 ANO8Q9HCE9 1232 aaPredicted RBP28.56■■■□□ 2.16
NHLRC4-202ENST00000540585 ROBO1Q9Y6N7 1651 aa28.55■■■□□ 2.16
NHLRC4-202ENST00000540585 SPINK5Q9NQ38 1064 aaPredicted RBP28.55■■■□□ 2.16
NHLRC4-202ENST00000540585 ANP32AP39687 249 aaKnown RBP28.54■■■□□ 2.16
NHLRC4-202ENST00000540585 U2AF1L5P0DN76 240 aaPredicted RBP28.54■■■□□ 2.16
NHLRC4-202ENST00000540585 U2AF1Q01081 240 aaKnown RBP eCLIP28.54■■■□□ 2.16
NHLRC4-202ENST00000540585 WWC1Q8IX03 1113 aa28.54■■■□□ 2.16
NHLRC4-202ENST00000540585 TCP11L2Q8N4U5 519 aa28.54■■■□□ 2.16
NHLRC4-202ENST00000540585 EXOC6Q8TAG9 804 aa28.53■■■□□ 2.16
NHLRC4-202ENST00000540585 FOXO3O43524 673 aa28.52■■■□□ 2.16
NHLRC4-202ENST00000540585 RTL5Q5HYW3 569 aaPredicted RBP28.52■■■□□ 2.16
NHLRC4-202ENST00000540585 ZNF692Q9BU19 519 aaPredicted RBP28.51■■■□□ 2.15
NHLRC4-202ENST00000540585 USP6P35125 1406 aa28.51■■■□□ 2.15
NHLRC4-202ENST00000540585 PLIN1O60240 522 aa28.5■■■□□ 2.15
NHLRC4-202ENST00000540585 NRKQ7Z2Y5 1582 aa28.5■■■□□ 2.15
NHLRC4-202ENST00000540585 PNPLA6Q8IY17 1366 aa28.5■■■□□ 2.15
NHLRC4-202ENST00000540585 DDX17Q92841 729 aaKnown RBP28.5■■■□□ 2.15
NHLRC4-202ENST00000540585 RRP7AQ9Y3A4 280 aaKnown RBP28.49■■■□□ 2.15
NHLRC4-202ENST00000540585 NHSL1Q5SYE7 1610 aa28.49■■■□□ 2.15
NHLRC4-202ENST00000540585 PIP4K2BP78356 416 aa28.49■■■□□ 2.15
NHLRC4-202ENST00000540585 PHF23Q9BUL5 403 aaPredicted RBP28.49■■■□□ 2.15
NHLRC4-202ENST00000540585 NEUROD2Q15784 382 aa28.47■■■□□ 2.15
NHLRC4-202ENST00000540585 SSH2Q76I76 1423 aa28.46■■■□□ 2.15
NHLRC4-202ENST00000540585 XPCQ01831 940 aaPredicted RBP28.46■■■□□ 2.15
NHLRC4-202ENST00000540585 PSME1Q06323 249 aa28.46■■■□□ 2.15
NHLRC4-202ENST00000540585 CCDC27Q2M243 656 aa28.46■■■□□ 2.15
NHLRC4-202ENST00000540585 NCBP3Q53F19 620 aaKnown RBP28.46■■■□□ 2.15
NHLRC4-202ENST00000540585 NPHP3Q7Z494 1330 aa28.46■■■□□ 2.15
NHLRC4-202ENST00000540585 U2SURPO15042 1029 aaKnown RBP28.46■■■□□ 2.15
NHLRC4-202ENST00000540585 ZBTB47Q9UFB7 747 aaPredicted RBP28.46■■■□□ 2.15
NHLRC4-202ENST00000540585 NME9Q86XW9 330 aa28.45■■■□□ 2.14
NHLRC4-202ENST00000540585 TRPM3Q9HCF6 1732 aaPredicted RBP28.45■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms