RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 NME9Q86XW9 330 aa17.89■□□□□ 0.45
INO80E-203ENST00000540562 PLEKHG5O94827 1062 aa17.89■□□□□ 0.45
INO80E-203ENST00000540562 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
INO80E-203ENST00000540562 TXNDC2Q86VQ3 553 aa17.88■□□□□ 0.45
INO80E-203ENST00000540562 PLEKHF1Q96S99 279 aa17.88■□□□□ 0.45
INO80E-203ENST00000540562 ATAD2Q6PL18 1390 aa17.88■□□□□ 0.45
INO80E-203ENST00000540562 POGZQ7Z3K3 1410 aa17.88■□□□□ 0.45
INO80E-203ENST00000540562 TULP4Q9NRJ4 1543 aa17.88■□□□□ 0.45
INO80E-203ENST00000540562 PHF23Q9BUL5 403 aaPredicted RBP17.87■□□□□ 0.45
INO80E-203ENST00000540562 ADGRB3O60242 1522 aa17.87■□□□□ 0.45
INO80E-203ENST00000540562 ADGRB1O14514 1584 aa17.87■□□□□ 0.45
INO80E-203ENST00000540562 ANKRD45Q5TZF3 282 aa17.87■□□□□ 0.45
INO80E-203ENST00000540562 C22orf23Q9BZE7 217 aa17.87■□□□□ 0.45
INO80E-203ENST00000540562 SBNO2Q9Y2G9 1366 aa17.86■□□□□ 0.45
INO80E-203ENST00000540562 KRT24Q2M2I5 525 aa17.86■□□□□ 0.45
INO80E-203ENST00000540562 TBC1D32Q96NH3 1257 aa17.86■□□□□ 0.45
INO80E-203ENST00000540562 SHPRHQ149N8 1683 aa17.85■□□□□ 0.45
INO80E-203ENST00000540562 PRKCSHP14314 528 aaPredicted RBP17.85■□□□□ 0.45
INO80E-203ENST00000540562 NGEFQ8N5V2 710 aa17.85■□□□□ 0.45
INO80E-203ENST00000540562 FRMPD1Q5SYB0 1578 aa17.84■□□□□ 0.45
INO80E-203ENST00000540562 GLI2P10070 1586 aa17.83■□□□□ 0.45
INO80E-203ENST00000540562 IQSEC2Q5JU85 1478 aa17.83■□□□□ 0.45
INO80E-203ENST00000540562 DDX19BQ9UMR2 479 aa17.83■□□□□ 0.44
INO80E-203ENST00000540562 RPGRIP1LQ68CZ1 1315 aa17.83■□□□□ 0.44
INO80E-203ENST00000540562 FAM69CQ0P6D2 419 aa17.83■□□□□ 0.44
INO80E-203ENST00000540562 POLKQ9UBT6 870 aa17.83■□□□□ 0.44
INO80E-203ENST00000540562 NRXN1Q9ULB1 1477 aa17.82■□□□□ 0.44
INO80E-203ENST00000540562 ABCC3O15438 1527 aa17.82■□□□□ 0.44
INO80E-203ENST00000540562 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
INO80E-203ENST00000540562 ARAP3Q8WWN8 1544 aa17.81■□□□□ 0.44
INO80E-203ENST00000540562 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
INO80E-203ENST00000540562 MIS18AQ9NYP9 233 aa17.8■□□□□ 0.44
INO80E-203ENST00000540562 KIAA1210Q9ULL0 1709 aa17.8■□□□□ 0.44
INO80E-203ENST00000540562 HSP90AA1P07900 732 aaKnown RBP17.8■□□□□ 0.44
INO80E-203ENST00000540562 CAMSAP1Q5T5Y3 1602 aa17.8■□□□□ 0.44
INO80E-203ENST00000540562 AEBP1Q8IUX7 1158 aa17.79■□□□□ 0.44
INO80E-203ENST00000540562 SIGLEC1Q9BZZ2 1709 aa17.78■□□□□ 0.44
INO80E-203ENST00000540562 ABCC11Q96J66 1382 aa17.78■□□□□ 0.44
INO80E-203ENST00000540562 NINLQ9Y2I6 1382 aa17.78■□□□□ 0.44
INO80E-203ENST00000540562 PPLO60437 1756 aa17.77■□□□□ 0.44
INO80E-203ENST00000540562 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.44
INO80E-203ENST00000540562 ZBTB40Q9NUA8 1239 aa17.77■□□□□ 0.44
INO80E-203ENST00000540562 SLC52A1Q9NWF4 448 aa17.77■□□□□ 0.44
INO80E-203ENST00000540562 IFT172Q9UG01 1749 aa17.77■□□□□ 0.44
INO80E-203ENST00000540562 PANK2Q9BZ23 570 aa17.77■□□□□ 0.43
INO80E-203ENST00000540562 YTHDC2Q9H6S0 1430 aaKnown RBP17.76■□□□□ 0.43
INO80E-203ENST00000540562 MBIPQ9NS73 344 aa17.76■□□□□ 0.43
INO80E-203ENST00000540562 NLRP1Q9C000 1473 aa17.76■□□□□ 0.43
INO80E-203ENST00000540562 RSPH6AQ9H0K4 717 aa17.75■□□□□ 0.43
INO80E-203ENST00000540562 ANTXR1Q9H6X2 564 aa17.75■□□□□ 0.43
INO80E-203ENST00000540562 IPO8O15397 1037 aaKnown RBP17.75■□□□□ 0.43
INO80E-203ENST00000540562 MCM10Q7L590 875 aa17.75■□□□□ 0.43
INO80E-203ENST00000540562 HSCBQ8IWL3 235 aa17.75■□□□□ 0.43
INO80E-203ENST00000540562 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
INO80E-203ENST00000540562 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
INO80E-203ENST00000540562 C16orf71Q8IYS4 520 aaPredicted RBP17.74■□□□□ 0.43
INO80E-203ENST00000540562 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
INO80E-203ENST00000540562 TWISTNBQ3B726 338 aaPredicted RBP17.73■□□□□ 0.43
INO80E-203ENST00000540562 CD2BP2O95400 341 aaKnown RBP17.73■□□□□ 0.43
INO80E-203ENST00000540562 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
INO80E-203ENST00000540562 NEXMIFQ5QGS0 1516 aa17.73■□□□□ 0.43
INO80E-203ENST00000540562 MLH3Q9UHC1 1453 aa17.72■□□□□ 0.43
INO80E-203ENST00000540562 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
INO80E-203ENST00000540562 SETBP1Q9Y6X0 1596 aa17.72■□□□□ 0.43
INO80E-203ENST00000540562 VAMP4O75379 141 aa17.71■□□□□ 0.43
INO80E-203ENST00000540562 ESF1Q9H501 851 aaKnown RBP17.71■□□□□ 0.43
INO80E-203ENST00000540562 MYO5BQ9ULV0 1848 aa17.71■□□□□ 0.43
INO80E-203ENST00000540562 SMARCA5O60264 1052 aaPredicted RBP17.71■□□□□ 0.43
INO80E-203ENST00000540562 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
INO80E-203ENST00000540562 FCHSD2O94868 740 aa17.7■□□□□ 0.42
INO80E-203ENST00000540562 SULT6B1Q6IMI4 303 aa17.7■□□□□ 0.42
INO80E-203ENST00000540562 SLC4A10Q6U841 1118 aa17.7■□□□□ 0.42
INO80E-203ENST00000540562 OTUD7AQ8TE49 926 aaPredicted RBP17.7■□□□□ 0.42
INO80E-203ENST00000540562 ARHGEF28Q8N1W1 1705 aaKnown RBP17.7■□□□□ 0.42
INO80E-203ENST00000540562 HDAC1Q13547 482 aaPredicted RBP17.7■□□□□ 0.42
INO80E-203ENST00000540562 NFE2L2Q16236 605 aa17.7■□□□□ 0.42
INO80E-203ENST00000540562 MYO3AQ8NEV4 1616 aa17.7■□□□□ 0.42
INO80E-203ENST00000540562 LMTK2Q8IWU2 1503 aa17.7■□□□□ 0.42
INO80E-203ENST00000540562 SMC5Q8IY18 1101 aa17.7■□□□□ 0.42
INO80E-203ENST00000540562 NSD2O96028 1365 aa17.69■□□□□ 0.42
INO80E-203ENST00000540562 COG3Q96JB2 828 aa17.69■□□□□ 0.42
INO80E-203ENST00000540562 ZC3H13Q5T200 1668 aaKnown RBP17.69■□□□□ 0.42
INO80E-203ENST00000540562 MCM4P33991 863 aa17.69■□□□□ 0.42
INO80E-203ENST00000540562 SIRT2Q8IXJ6 389 aa17.69■□□□□ 0.42
INO80E-203ENST00000540562 NUDT16Q96DE0 195 aaKnown RBP17.69■□□□□ 0.42
INO80E-203ENST00000540562 CD163L1Q9NR16 1453 aa17.69■□□□□ 0.42
INO80E-203ENST00000540562 NUCB1Q02818 461 aa17.68■□□□□ 0.42
INO80E-203ENST00000540562 TPRNQ4KMQ1 711 aa17.68■□□□□ 0.42
INO80E-203ENST00000540562 ZBTB7BO15156 539 aaPredicted RBP17.68■□□□□ 0.42
INO80E-203ENST00000540562 TSHZ3Q63HK5 1081 aa17.68■□□□□ 0.42
INO80E-203ENST00000540562 PTPRMP28827 1452 aa17.67■□□□□ 0.42
INO80E-203ENST00000540562 FOXO3O43524 673 aa17.67■□□□□ 0.42
INO80E-203ENST00000540562 MRPL50Q8N5N7 158 aaKnown RBP17.67■□□□□ 0.42
INO80E-203ENST00000540562 SLC26A8Q96RN1 970 aa17.67■□□□□ 0.42
INO80E-203ENST00000540562 PIK3C2BO00750 1634 aa17.67■□□□□ 0.42
INO80E-203ENST00000540562 FOXD4L5Q5VV16 416 aaPredicted RBP17.67■□□□□ 0.42
INO80E-203ENST00000540562 FOXD4L4Q8WXT5 416 aaPredicted RBP17.67■□□□□ 0.42
INO80E-203ENST00000540562 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
INO80E-203ENST00000540562 TRAK2O60296 914 aa17.66■□□□□ 0.42
INO80E-203ENST00000540562 HSP90AB2PQ58FF8 381 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms