RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 GTF2F1P35269 517 aaKnown RBP eCLIP13.43□□□□□ -0.26
LRP6-205ENST00000540527 SETQ01105 290 aaPredicted RBP13.43□□□□□ -0.26
LRP6-205ENST00000540527 USP17L24Q0WX57 530 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 HSP90AB2PQ58FF8 381 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 ZSCAN29Q8IWY8 852 aaPredicted RBP13.43□□□□□ -0.26
LRP6-205ENST00000540527 ZCRB1Q8TBF4 217 aaKnown RBP13.43□□□□□ -0.26
LRP6-205ENST00000540527 PIF1Q9H611 641 aa13.43□□□□□ -0.26
LRP6-205ENST00000540527 MAP4K4O95819 1239 aaPredicted RBP13.42□□□□□ -0.26
LRP6-205ENST00000540527 METTL16Q86W50 562 aaKnown RBP13.42□□□□□ -0.26
LRP6-205ENST00000540527 NT5DC4Q86YG4 428 aa13.42□□□□□ -0.26
LRP6-205ENST00000540527 SMC5Q8IY18 1101 aa13.42□□□□□ -0.26
LRP6-205ENST00000540527 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
LRP6-205ENST00000540527 ZBTB3Q9H5J0 574 aa13.42□□□□□ -0.26
LRP6-205ENST00000540527 USP17L3A6NCW0 530 aa13.41□□□□□ -0.26
LRP6-205ENST00000540527 USP17L4A6NCW7 530 aa13.41□□□□□ -0.26
LRP6-205ENST00000540527 PAK3O75914 559 aaPredicted RBP13.41□□□□□ -0.26
LRP6-205ENST00000540527 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
LRP6-205ENST00000540527 LDLRAD1Q5T700 205 aa13.41□□□□□ -0.26
LRP6-205ENST00000540527 USP17L2Q6R6M4 530 aa13.41□□□□□ -0.26
LRP6-205ENST00000540527 USP17L1Q7RTZ2 530 aa13.41□□□□□ -0.26
LRP6-205ENST00000540527 PLEKHM2Q8IWE5 1019 aa13.41□□□□□ -0.26
LRP6-205ENST00000540527 TGIF2Q9GZN2 237 aa13.41□□□□□ -0.26
LRP6-205ENST00000540527 DCTN4Q9UJW0 460 aa13.41□□□□□ -0.26
LRP6-205ENST00000540527 CCDC194A0A1B0GVG4 234 aa13.4□□□□□ -0.26
LRP6-205ENST00000540527 MAFGO15525 162 aa13.4□□□□□ -0.26
LRP6-205ENST00000540527 CTDSPL2Q05D32 466 aa13.4□□□□□ -0.26
LRP6-205ENST00000540527 TCEAL1Q15170 157 aa13.4□□□□□ -0.26
LRP6-205ENST00000540527 FAM200AQ8TCP9 573 aa13.4□□□□□ -0.26
LRP6-205ENST00000540527 IQSEC3Q9UPP2 1182 aaPredicted RBP13.4□□□□□ -0.26
LRP6-205ENST00000540527 PEX14O75381 377 aa13.39□□□□□ -0.27
LRP6-205ENST00000540527 H3BRB1 525 aa13.38□□□□□ -0.27
LRP6-205ENST00000540527 PHF14O94880 888 aa13.38□□□□□ -0.27
LRP6-205ENST00000540527 RBL2Q08999 1139 aa13.38□□□□□ -0.27
LRP6-205ENST00000540527 CRTC2Q53ET0 693 aaPredicted RBP13.38□□□□□ -0.27
LRP6-205ENST00000540527 PNMA1Q8ND90 353 aa13.38□□□□□ -0.27
LRP6-205ENST00000540527 GMLQ99445 158 aa13.38□□□□□ -0.27
LRP6-205ENST00000540527 TUT1Q9H6E5 874 aaKnown RBP13.38□□□□□ -0.27
LRP6-205ENST00000540527 FAN1Q9Y2M0 1017 aa13.38□□□□□ -0.27
LRP6-205ENST00000540527 EIF3JO75822 258 aaKnown RBP13.37□□□□□ -0.27
LRP6-205ENST00000540527 SOGA3Q5TF21 947 aa13.37□□□□□ -0.27
LRP6-205ENST00000540527 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
LRP6-205ENST00000540527 PADI6Q6TGC4 694 aa13.37□□□□□ -0.27
LRP6-205ENST00000540527 ZSWIM4Q9H7M6 989 aa13.37□□□□□ -0.27
LRP6-205ENST00000540527 CCSER2Q9H7U1 834 aa13.37□□□□□ -0.27
LRP6-205ENST00000540527 CAPN10Q9HC96 672 aa13.37□□□□□ -0.27
LRP6-205ENST00000540527 CHPF2Q9P2E5 772 aa13.37□□□□□ -0.27
LRP6-205ENST00000540527 HMGB1P1B2RPK0 211 aaPredicted RBP13.36□□□□□ -0.27
LRP6-205ENST00000540527 PPP1R3GB7ZBB8 358 aa13.36□□□□□ -0.27
LRP6-205ENST00000540527 ICMTO60725 284 aa13.36□□□□□ -0.27
LRP6-205ENST00000540527 PTK7Q13308 1070 aa13.36□□□□□ -0.27
LRP6-205ENST00000540527 SWI5Q1ZZU3 235 aa13.36□□□□□ -0.27
LRP6-205ENST00000540527 RNF187Q5TA31 235 aaPredicted RBP13.35□□□□□ -0.27
LRP6-205ENST00000540527 SPTY2D1Q68D10 685 aaPredicted RBP13.35□□□□□ -0.27
LRP6-205ENST00000540527 ZNF746Q6NUN9 644 aaPredicted RBP13.35□□□□□ -0.27
LRP6-205ENST00000540527 GLYCTKQ8IVS8 523 aa13.35□□□□□ -0.27
LRP6-205ENST00000540527 UBA5Q9GZZ9 404 aa13.35□□□□□ -0.27
LRP6-205ENST00000540527 USP17L5A8MUK1 530 aa13.34□□□□□ -0.27
LRP6-205ENST00000540527 CENPBP07199 599 aaPredicted RBP13.34□□□□□ -0.27
LRP6-205ENST00000540527 HSD3B2P26439 372 aa13.34□□□□□ -0.27
LRP6-205ENST00000540527 SCNN1AP37088 669 aa13.34□□□□□ -0.27
LRP6-205ENST00000540527 LARP1Q6PKG0 1096 aaKnown RBP13.34□□□□□ -0.27
LRP6-205ENST00000540527 RGL4Q8IZJ4 473 aa13.34□□□□□ -0.27
LRP6-205ENST00000540527 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
LRP6-205ENST00000540527 METTL5Q9NRN9 209 aaKnown RBP13.34□□□□□ -0.27
LRP6-205ENST00000540527 PIK3CDO00329 1044 aa13.33□□□□□ -0.28
LRP6-205ENST00000540527 ABL1P00519 1130 aa13.33□□□□□ -0.28
LRP6-205ENST00000540527 GNL2Q13823 731 aaKnown RBP13.33□□□□□ -0.28
LRP6-205ENST00000540527 RALBP1Q15311 655 aa13.33□□□□□ -0.28
LRP6-205ENST00000540527 RNF135Q8IUD6 432 aa13.33□□□□□ -0.28
LRP6-205ENST00000540527 SULF1Q8IWU6 871 aa13.33□□□□□ -0.28
LRP6-205ENST00000540527 HELBQ8NG08 1087 aaPredicted RBP13.33□□□□□ -0.28
LRP6-205ENST00000540527 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.28
LRP6-205ENST00000540527 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.28
LRP6-205ENST00000540527 APBB1IPQ7Z5R6 666 aaPredicted RBP13.32□□□□□ -0.28
LRP6-205ENST00000540527 CERKQ8TCT0 537 aa13.32□□□□□ -0.28
LRP6-205ENST00000540527 LRRN4Q8WUT4 740 aa13.32□□□□□ -0.28
LRP6-205ENST00000540527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
LRP6-205ENST00000540527 JAZF1Q86VZ6 243 aa13.31□□□□□ -0.28
LRP6-205ENST00000540527 TMEM87AQ8NBN3 555 aa13.31□□□□□ -0.28
LRP6-205ENST00000540527 TTC13Q8NBP0 860 aa13.31□□□□□ -0.28
LRP6-205ENST00000540527 EPS8L1Q8TE68 723 aa13.31□□□□□ -0.28
LRP6-205ENST00000540527 RBM33Q96EV2 1170 aaKnown RBP13.31□□□□□ -0.28
LRP6-205ENST00000540527 ZNF211Q13398 564 aaPredicted RBP13.3□□□□□ -0.28
LRP6-205ENST00000540527 OSBPL2Q9H1P3 480 aa13.3□□□□□ -0.28
LRP6-205ENST00000540527 MKRN1Q9UHC7 482 aaKnown RBP13.3□□□□□ -0.28
LRP6-205ENST00000540527 COL4A3BPQ9Y5P4 624 aa13.3□□□□□ -0.28
LRP6-205ENST00000540527 PITPNM1O00562 1244 aa13.29□□□□□ -0.28
LRP6-205ENST00000540527 ITGAEP38570 1179 aa13.29□□□□□ -0.28
LRP6-205ENST00000540527 ANKMY2Q8IV38 441 aa13.29□□□□□ -0.28
LRP6-205ENST00000540527 RNF34Q969K3 372 aa13.29□□□□□ -0.28
LRP6-205ENST00000540527 C21orf2O43822 256 aa13.28□□□□□ -0.28
LRP6-205ENST00000540527 SKIP12755 728 aa13.28□□□□□ -0.28
LRP6-205ENST00000540527 FANCCQ00597 558 aa13.28□□□□□ -0.28
LRP6-205ENST00000540527 U2SURPO15042 1029 aaKnown RBP13.27□□□□□ -0.29
LRP6-205ENST00000540527 RASA1P20936 1047 aa13.27□□□□□ -0.29
LRP6-205ENST00000540527 TAS1R3Q7RTX0 852 aa13.27□□□□□ -0.29
LRP6-205ENST00000540527 ATP5J2-PTCD1G3V325 749 aa13.26□□□□□ -0.29
LRP6-205ENST00000540527 DPY19L2Q6NUT2 758 aa13.26□□□□□ -0.29
LRP6-205ENST00000540527 SLAIN1Q8ND83 568 aa13.26□□□□□ -0.29
LRP6-205ENST00000540527 PMM1Q92871 262 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms