RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 SBNO1A3KN83 1393 aa16.3■□□□□ 0.2
CYB561A3-215ENST00000540317 TRPC5Q9UL62 973 aaPredicted RBP16.3■□□□□ 0.2
CYB561A3-215ENST00000540317 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
CYB561A3-215ENST00000540317 KTN1Q86UP2 1357 aaKnown RBP16.29■□□□□ 0.2
CYB561A3-215ENST00000540317 CENPJQ9HC77 1338 aaPredicted RBP16.29■□□□□ 0.2
CYB561A3-215ENST00000540317 COL22A1Q8NFW1 1626 aaPredicted RBP16.29■□□□□ 0.2
CYB561A3-215ENST00000540317 ARHGEF10O15013 1369 aa16.28■□□□□ 0.2
CYB561A3-215ENST00000540317 ARHGEF28Q8N1W1 1705 aaKnown RBP16.28■□□□□ 0.2
CYB561A3-215ENST00000540317 SRPK2P78362 688 aaKnown RBP16.28■□□□□ 0.2
CYB561A3-215ENST00000540317 TMF1P82094 1093 aa16.28■□□□□ 0.2
CYB561A3-215ENST00000540317 POLR3GLQ9BT43 218 aa16.28■□□□□ 0.2
CYB561A3-215ENST00000540317 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
CYB561A3-215ENST00000540317 CCDC61Q9Y6R9 512 aa16.27■□□□□ 0.2
CYB561A3-215ENST00000540317 TESK2Q96S53 571 aa16.26■□□□□ 0.19
CYB561A3-215ENST00000540317 CDCA8Q53HL2 280 aa16.26■□□□□ 0.19
CYB561A3-215ENST00000540317 CABP2Q9NPB3 220 aa16.25■□□□□ 0.19
CYB561A3-215ENST00000540317 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
CYB561A3-215ENST00000540317 ACEP12821 1306 aa16.23■□□□□ 0.19
CYB561A3-215ENST00000540317 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
CYB561A3-215ENST00000540317 ATP7BP35670 1465 aa16.23■□□□□ 0.19
CYB561A3-215ENST00000540317 BCL9LQ86UU0 1499 aa16.23■□□□□ 0.19
CYB561A3-215ENST00000540317 GJD4Q96KN9 370 aaPredicted RBP16.22■□□□□ 0.19
CYB561A3-215ENST00000540317 PLEKHG3A1L390 1219 aa16.21■□□□□ 0.19
CYB561A3-215ENST00000540317 FAM83GA6ND36 823 aa16.21■□□□□ 0.18
CYB561A3-215ENST00000540317 RALBP1Q15311 655 aa16.21■□□□□ 0.18
CYB561A3-215ENST00000540317 UPF1Q92900 1129 aaKnown RBP eCLIP16.21■□□□□ 0.181e-7■■■■■ 39.2
CYB561A3-215ENST00000540317 MRS2Q9HD23 443 aa16.21■□□□□ 0.18
CYB561A3-215ENST00000540317 RGS12O14924 1447 aa16.2■□□□□ 0.18
CYB561A3-215ENST00000540317 ATRNO75882 1429 aa16.2■□□□□ 0.18
CYB561A3-215ENST00000540317 NUTM2GQ5VZR2 741 aa16.2■□□□□ 0.18
CYB561A3-215ENST00000540317 CCDC9Q9Y3X0 531 aaKnown RBP16.2■□□□□ 0.18
CYB561A3-215ENST00000540317 EVC2Q86UK5 1308 aa16.19■□□□□ 0.18
CYB561A3-215ENST00000540317 CABP1Q9NZU7 370 aa16.18■□□□□ 0.18
CYB561A3-215ENST00000540317 POLR3AO14802 1390 aaPredicted RBP16.18■□□□□ 0.18
CYB561A3-215ENST00000540317 SLIT2O94813 1529 aa16.18■□□□□ 0.18
CYB561A3-215ENST00000540317 ABTB2Q8N961 1025 aa16.17■□□□□ 0.18
CYB561A3-215ENST00000540317 PPIP5K1Q6PFW1 1433 aa16.17■□□□□ 0.18
CYB561A3-215ENST00000540317 MARF1Q9Y4F3 1742 aaKnown RBP16.17■□□□□ 0.18
CYB561A3-215ENST00000540317 BTG4Q9NY30 223 aa16.17■□□□□ 0.18
CYB561A3-215ENST00000540317 ITSN1Q15811 1721 aa16.16■□□□□ 0.18
CYB561A3-215ENST00000540317 PRDM11Q9NQV5 511 aa16.16■□□□□ 0.18
CYB561A3-215ENST00000540317 TRPM3Q9HCF6 1732 aaPredicted RBP16.16■□□□□ 0.18
CYB561A3-215ENST00000540317 VPS72Q15906 364 aa16.15■□□□□ 0.18
CYB561A3-215ENST00000540317 SBNO2Q9Y2G9 1366 aa16.15■□□□□ 0.18
CYB561A3-215ENST00000540317 ZC3H6P61129 1189 aaKnown RBP16.14■□□□□ 0.17
CYB561A3-215ENST00000540317 MYBBP1AQ9BQG0 1328 aaKnown RBP16.14■□□□□ 0.17
CYB561A3-215ENST00000540317 QRICH2Q9H0J4 1663 aa16.14■□□□□ 0.17
CYB561A3-215ENST00000540317 PER1O15534 1290 aaPredicted RBP16.13■□□□□ 0.17
CYB561A3-215ENST00000540317 ALS2Q96Q42 1657 aa16.13■□□□□ 0.17
CYB561A3-215ENST00000540317 HNRNPUQ00839 825 aaKnown RBP eCLIP16.13■□□□□ 0.17
CYB561A3-215ENST00000540317 NLRP13Q86W25 1043 aa16.13■□□□□ 0.17
CYB561A3-215ENST00000540317 BRD4O60885 1362 aaPredicted RBP16.12■□□□□ 0.17
CYB561A3-215ENST00000540317 CHRNA2Q15822 529 aa16.12■□□□□ 0.17
CYB561A3-215ENST00000540317 CCDC184Q52MB2 194 aa16.12■□□□□ 0.17
CYB561A3-215ENST00000540317 ATAD2Q6PL18 1390 aa16.12■□□□□ 0.17
CYB561A3-215ENST00000540317 A0A0G2JS52 829 aa16.11■□□□□ 0.17
CYB561A3-215ENST00000540317 MYT1Q01538 1121 aa16.11■□□□□ 0.17
CYB561A3-215ENST00000540317 PANK3Q9H999 370 aa16.11■□□□□ 0.17
CYB561A3-215ENST00000540317 SEPT12Q8IYM1 358 aa16.1■□□□□ 0.17
CYB561A3-215ENST00000540317 TOPAZ1Q8N9V7 1692 aa16.1■□□□□ 0.17
CYB561A3-215ENST00000540317 PARD3Q8TEW0 1356 aa16.1■□□□□ 0.17
CYB561A3-215ENST00000540317 KIAA0232Q92628 1395 aa16.1■□□□□ 0.17
CYB561A3-215ENST00000540317 NLRP6P59044 892 aa16.09■□□□□ 0.17
CYB561A3-215ENST00000540317 FAM9BQ8IZU0 186 aa16.09■□□□□ 0.17
CYB561A3-215ENST00000540317 TMC1Q8TDI8 760 aa16.09■□□□□ 0.17
CYB561A3-215ENST00000540317 ZNF692Q9BU19 519 aaPredicted RBP16.09■□□□□ 0.17
CYB561A3-215ENST00000540317 ABCA3Q99758 1704 aa16.09■□□□□ 0.17
CYB561A3-215ENST00000540317 STRN4Q9NRL3 753 aa16.09■□□□□ 0.17
CYB561A3-215ENST00000540317 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.08■□□□□ 0.17
CYB561A3-215ENST00000540317 GCP02774 474 aa16.08■□□□□ 0.16
CYB561A3-215ENST00000540317 EVA1CP58658 441 aa16.08■□□□□ 0.16
CYB561A3-215ENST00000540317 FAM98CQ17RN3 349 aaKnown RBP16.08■□□□□ 0.16
CYB561A3-215ENST00000540317 ONECUT3O60422 494 aaPredicted RBP16.07■□□□□ 0.16
CYB561A3-215ENST00000540317 USP6P35125 1406 aa16.07■□□□□ 0.16
CYB561A3-215ENST00000540317 PLCH1Q4KWH8 1693 aa16.06■□□□□ 0.16
CYB561A3-215ENST00000540317 ZBED9Q6R2W3 1325 aa16.06■□□□□ 0.16
CYB561A3-215ENST00000540317 GLI3P10071 1580 aa16.06■□□□□ 0.16
CYB561A3-215ENST00000540317 ZBTB7CA1YPR0 619 aa16.06■□□□□ 0.16
CYB561A3-215ENST00000540317 NWD2Q9ULI1 1742 aa16.05■□□□□ 0.16
CYB561A3-215ENST00000540317 PUS7Q96PZ0 661 aaKnown RBP16.05■□□□□ 0.16
CYB561A3-215ENST00000540317 KNSTRNQ9Y448 316 aa16.05■□□□□ 0.16
CYB561A3-215ENST00000540317 COL14A1Q05707 1796 aaKnown RBP16.05■□□□□ 0.16
CYB561A3-215ENST00000540317 NPC1L1Q9UHC9 1359 aa16.05■□□□□ 0.16
CYB561A3-215ENST00000540317 USP19O94966 1318 aa16.05■□□□□ 0.16
CYB561A3-215ENST00000540317 KRT27Q7Z3Y8 459 aa16.04■□□□□ 0.16
CYB561A3-215ENST00000540317 PNISRQ8TF01 805 aaKnown RBP16.04■□□□□ 0.16
CYB561A3-215ENST00000540317 SPATA31A5Q5VU36 1347 aa16.04■□□□□ 0.16
CYB561A3-215ENST00000540317 SPATA31A7Q8IWB4 1347 aa16.04■□□□□ 0.16
CYB561A3-215ENST00000540317 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
CYB561A3-215ENST00000540317 TTC21BQ7Z4L5 1316 aa16.03■□□□□ 0.16
CYB561A3-215ENST00000540317 CCDC125Q86Z20 511 aa16.03■□□□□ 0.16
CYB561A3-215ENST00000540317 SLC12A5Q9H2X9 1139 aa16.02■□□□□ 0.16
CYB561A3-215ENST00000540317 MYOM1P52179 1685 aa16.02■□□□□ 0.15
CYB561A3-215ENST00000540317 SOX12O15370 315 aa16.01■□□□□ 0.15
CYB561A3-215ENST00000540317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.01■□□□□ 0.15
CYB561A3-215ENST00000540317 CRYBG1Q9Y4K1 1723 aa16.01■□□□□ 0.15
CYB561A3-215ENST00000540317 INSRP06213 1382 aa16.01■□□□□ 0.15
CYB561A3-215ENST00000540317 SSH2Q76I76 1423 aa16.01■□□□□ 0.15
CYB561A3-215ENST00000540317 NEFLP07196 543 aa16■□□□□ 0.15
CYB561A3-215ENST00000540317 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms