RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 PUS7Q96PZ0 661 aaKnown RBP18.88■□□□□ 0.61
CCDC130-202ENST00000540216 CABP1Q9NZU7 370 aa18.88■□□□□ 0.61
CCDC130-202ENST00000540216 ST20-MTHFSA0A0A6YYL1 179 aa18.87■□□□□ 0.61
CCDC130-202ENST00000540216 TESK2Q96S53 571 aa18.87■□□□□ 0.61
CCDC130-202ENST00000540216 USP6P35125 1406 aa18.86■□□□□ 0.61
CCDC130-202ENST00000540216 FNBP4Q8N3X1 1017 aaPredicted RBP18.85■□□□□ 0.61
CCDC130-202ENST00000540216 CRYBG1Q9Y4K1 1723 aa18.85■□□□□ 0.61
CCDC130-202ENST00000540216 ZNF692Q9BU19 519 aaPredicted RBP18.84■□□□□ 0.61
CCDC130-202ENST00000540216 CABLES1Q8TDN4 633 aa18.83■□□□□ 0.6
CCDC130-202ENST00000540216 AKAP12Q02952 1782 aa18.83■□□□□ 0.6
CCDC130-202ENST00000540216 NINLQ9Y2I6 1382 aa18.82■□□□□ 0.6
CCDC130-202ENST00000540216 USP21Q9UK80 565 aa18.82■□□□□ 0.6
CCDC130-202ENST00000540216 CPSF1Q10570 1443 aaKnown RBP18.82■□□□□ 0.6
CCDC130-202ENST00000540216 SLIT2O94813 1529 aa18.81■□□□□ 0.6
CCDC130-202ENST00000540216 SOCS7O14512 581 aa18.81■□□□□ 0.6
CCDC130-202ENST00000540216 SSH2Q76I76 1423 aa18.81■□□□□ 0.6
CCDC130-202ENST00000540216 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.8■□□□□ 0.6
CCDC130-202ENST00000540216 CDK12Q9NYV4 1490 aaPredicted RBP18.8■□□□□ 0.6
CCDC130-202ENST00000540216 TMF1P82094 1093 aa18.8■□□□□ 0.6
CCDC130-202ENST00000540216 ABTB2Q8N961 1025 aa18.8■□□□□ 0.6
CCDC130-202ENST00000540216 PHRF1Q9P1Y6 1649 aaKnown RBP18.8■□□□□ 0.6
CCDC130-202ENST00000540216 BCL9LQ86UU0 1499 aa18.79■□□□□ 0.6
CCDC130-202ENST00000540216 RXRBP28702 533 aa18.79■□□□□ 0.6
CCDC130-202ENST00000540216 QTRT2Q9H974 415 aaKnown RBP18.79■□□□□ 0.6
CCDC130-202ENST00000540216 TRPC5Q9UL62 973 aaPredicted RBP18.79■□□□□ 0.6
CCDC130-202ENST00000540216 NWD2Q9ULI1 1742 aa18.79■□□□□ 0.6
CCDC130-202ENST00000540216 USP19O94966 1318 aa18.78■□□□□ 0.6
CCDC130-202ENST00000540216 MON2Q7Z3U7 1717 aa18.78■□□□□ 0.6
CCDC130-202ENST00000540216 NRKQ7Z2Y5 1582 aa18.78■□□□□ 0.6
CCDC130-202ENST00000540216 ATRNO75882 1429 aa18.78■□□□□ 0.6
CCDC130-202ENST00000540216 PLEKHG5O94827 1062 aa18.78■□□□□ 0.6
CCDC130-202ENST00000540216 CDCA8Q53HL2 280 aa18.78■□□□□ 0.6
CCDC130-202ENST00000540216 NLRP13Q86W25 1043 aa18.78■□□□□ 0.6
CCDC130-202ENST00000540216 PLCH1Q4KWH8 1693 aa18.78■□□□□ 0.6
CCDC130-202ENST00000540216 TTC21AQ8NDW8 1320 aa18.77■□□□□ 0.6
CCDC130-202ENST00000540216 RBM6P78332 1123 aaKnown RBP18.77■□□□□ 0.6
CCDC130-202ENST00000540216 COL14A1Q05707 1796 aaKnown RBP18.77■□□□□ 0.6
CCDC130-202ENST00000540216 KTN1Q86UP2 1357 aaKnown RBP18.77■□□□□ 0.6
CCDC130-202ENST00000540216 CD163L1Q9NR16 1453 aa18.77■□□□□ 0.59
CCDC130-202ENST00000540216 NUTM2GQ5VZR2 741 aa18.76■□□□□ 0.59
CCDC130-202ENST00000540216 HDGFL2Q7Z4V5 671 aaPredicted RBP18.76■□□□□ 0.59
CCDC130-202ENST00000540216 TMC1Q8TDI8 760 aa18.76■□□□□ 0.59
CCDC130-202ENST00000540216 TERF2IPQ9NYB0 399 aa18.76■□□□□ 0.59
CCDC130-202ENST00000540216 TTC21BQ7Z4L5 1316 aa18.75■□□□□ 0.59
CCDC130-202ENST00000540216 UNC5CLQ8IV45 518 aa18.75■□□□□ 0.59
CCDC130-202ENST00000540216 PIK3C2AO00443 1686 aa18.75■□□□□ 0.59
CCDC130-202ENST00000540216 SLC12A5Q9H2X9 1139 aa18.74■□□□□ 0.59
CCDC130-202ENST00000540216 FAM83GA6ND36 823 aa18.73■□□□□ 0.59
CCDC130-202ENST00000540216 EIF4G2P78344 907 aaKnown RBP eCLIP18.73■□□□□ 0.59
CCDC130-202ENST00000540216 PRDM11Q9NQV5 511 aa18.73■□□□□ 0.59
CCDC130-202ENST00000540216 SLIT3O75094 1523 aa18.73■□□□□ 0.59
CCDC130-202ENST00000540216 EDC4Q6P2E9 1401 aaKnown RBP18.73■□□□□ 0.59
CCDC130-202ENST00000540216 A0A1W2PP64 1363 aa18.72■□□□□ 0.59
CCDC130-202ENST00000540216 CPDO75976 1380 aa18.72■□□□□ 0.59
CCDC130-202ENST00000540216 NLRP6P59044 892 aa18.72■□□□□ 0.59
CCDC130-202ENST00000540216 KIAA0232Q92628 1395 aa18.71■□□□□ 0.59
CCDC130-202ENST00000540216 NRAPQ86VF7 1730 aa18.71■□□□□ 0.59
CCDC130-202ENST00000540216 GCP02774 474 aa18.7■□□□□ 0.58
CCDC130-202ENST00000540216 USP54Q70EL1 1684 aa18.69■□□□□ 0.58
CCDC130-202ENST00000540216 ANKRD36BQ8N2N9 1353 aa18.69■□□□□ 0.58
CCDC130-202ENST00000540216 RGS12O14924 1447 aa18.69■□□□□ 0.58
CCDC130-202ENST00000540216 VPS72Q15906 364 aa18.69■□□□□ 0.58
CCDC130-202ENST00000540216 GJD4Q96KN9 370 aaPredicted RBP18.69■□□□□ 0.58
CCDC130-202ENST00000540216 BTG4Q9NY30 223 aa18.68■□□□□ 0.58
CCDC130-202ENST00000540216 USP31Q70CQ4 1352 aa18.68■□□□□ 0.58
CCDC130-202ENST00000540216 HSPA5P11021 654 aaKnown RBP18.67■□□□□ 0.58
CCDC130-202ENST00000540216 ZC3H6P61129 1189 aaKnown RBP18.67■□□□□ 0.58
CCDC130-202ENST00000540216 KCNH5Q8NCM2 988 aa18.67■□□□□ 0.58
CCDC130-202ENST00000540216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCDC130-202ENST00000540216 GLI3P10071 1580 aa18.66■□□□□ 0.58
CCDC130-202ENST00000540216 MYOM1P52179 1685 aa18.65■□□□□ 0.58
CCDC130-202ENST00000540216 LMO7Q8WWI1 1683 aa18.65■□□□□ 0.58
CCDC130-202ENST00000540216 CHRNA2Q15822 529 aa18.64■□□□□ 0.57
CCDC130-202ENST00000540216 NME9Q86XW9 330 aa18.63■□□□□ 0.57
CCDC130-202ENST00000540216 AATKQ6ZMQ8 1374 aa18.63■□□□□ 0.57
CCDC130-202ENST00000540216 NFAT5O94916 1531 aa18.63■□□□□ 0.57
CCDC130-202ENST00000540216 CCDC9Q9Y3X0 531 aaKnown RBP18.62■□□□□ 0.57
CCDC130-202ENST00000540216 CAMTA1Q9Y6Y1 1673 aa18.61■□□□□ 0.57
CCDC130-202ENST00000540216 ABCC6O95255 1503 aa18.61■□□□□ 0.57
CCDC130-202ENST00000540216 OVOS2A0A0J9YW53 1432 aa18.61■□□□□ 0.57
CCDC130-202ENST00000540216 OVOS2Q6IE36 1432 aa18.61■□□□□ 0.57
CCDC130-202ENST00000540216 SPATA31A5Q5VU36 1347 aa18.6■□□□□ 0.57
CCDC130-202ENST00000540216 SPATA31A7Q8IWB4 1347 aa18.6■□□□□ 0.57
CCDC130-202ENST00000540216 ARHGEF25Q86VW2 580 aa18.59■□□□□ 0.57
CCDC130-202ENST00000540216 ONECUT3O60422 494 aaPredicted RBP18.58■□□□□ 0.56
CCDC130-202ENST00000540216 EVA1CP58658 441 aa18.58■□□□□ 0.56
CCDC130-202ENST00000540216 COL5A2P05997 1499 aaPredicted RBP18.58■□□□□ 0.56
CCDC130-202ENST00000540216 COL18A1P39060 1754 aa18.58■□□□□ 0.56
CCDC130-202ENST00000540216 STRN4Q9NRL3 753 aa18.57■□□□□ 0.56
CCDC130-202ENST00000540216 ZRANB1Q9UGI0 708 aa18.57■□□□□ 0.56
CCDC130-202ENST00000540216 SPATA31A1Q5TZJ5 1347 aa18.56■□□□□ 0.56
CCDC130-202ENST00000540216 ZBTB7CA1YPR0 619 aa18.56■□□□□ 0.56
CCDC130-202ENST00000540216 COG3Q96JB2 828 aa18.56■□□□□ 0.56
CCDC130-202ENST00000540216 SOX12O15370 315 aa18.55■□□□□ 0.56
CCDC130-202ENST00000540216 KIF20BQ96Q89 1820 aa18.54■□□□□ 0.56
CCDC130-202ENST00000540216 SEPT12Q8IYM1 358 aa18.54■□□□□ 0.56
CCDC130-202ENST00000540216 NSD3Q9BZ95 1437 aa18.54■□□□□ 0.56
CCDC130-202ENST00000540216 THSD7AQ9UPZ6 1657 aa18.54■□□□□ 0.56
CCDC130-202ENST00000540216 CRB1P82279 1406 aa18.53■□□□□ 0.56
CCDC130-202ENST00000540216 POLR3GLQ9BT43 218 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms