RNA–Protein interactions for RNA: ENST00000540115.1

ACSL3-210, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 3

Gene ACSL3, Length 624 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-210ENST00000540115 CARD11Q9BXL7 1154 aa14.18□□□□□ -0.14
ACSL3-210ENST00000540115 ATP7BP35670 1465 aa14.18□□□□□ -0.14
ACSL3-210ENST00000540115 ACEP12821 1306 aa14.17□□□□□ -0.14
ACSL3-210ENST00000540115 USP32Q8NFA0 1604 aa14.17□□□□□ -0.14
ACSL3-210ENST00000540115 NBPF8Q3BBV2 869 aa14.17□□□□□ -0.14
ACSL3-210ENST00000540115 CABLES1Q8TDN4 633 aa14.17□□□□□ -0.14
ACSL3-210ENST00000540115 RGPD8O14715 1765 aaPredicted RBP14.17□□□□□ -0.14
ACSL3-210ENST00000540115 GJD4Q96KN9 370 aaPredicted RBP14.16□□□□□ -0.14
ACSL3-210ENST00000540115 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
ACSL3-210ENST00000540115 ATRNO75882 1429 aa14.15□□□□□ -0.14
ACSL3-210ENST00000540115 POLR3AO14802 1390 aaPredicted RBP14.15□□□□□ -0.14
ACSL3-210ENST00000540115 BRD4O60885 1362 aaPredicted RBP14.15□□□□□ -0.14
ACSL3-210ENST00000540115 SLC24A1O60721 1099 aa14.15□□□□□ -0.14
ACSL3-210ENST00000540115 CCDC9Q9Y3X0 531 aaKnown RBP14.15□□□□□ -0.14
ACSL3-210ENST00000540115 ITSN1Q15811 1721 aa14.15□□□□□ -0.14
ACSL3-210ENST00000540115 PPIP5K1Q6PFW1 1433 aa14.14□□□□□ -0.15
ACSL3-210ENST00000540115 BCL9LQ86UU0 1499 aa14.13□□□□□ -0.15
ACSL3-210ENST00000540115 TRPM1Q7Z4N2 1603 aa14.13□□□□□ -0.15
ACSL3-210ENST00000540115 ABTB2Q8N961 1025 aa14.13□□□□□ -0.15
ACSL3-210ENST00000540115 CABP1Q9NZU7 370 aa14.13□□□□□ -0.15
ACSL3-210ENST00000540115 SLIT2O94813 1529 aa14.12□□□□□ -0.15
ACSL3-210ENST00000540115 VPS72Q15906 364 aa14.12□□□□□ -0.15
ACSL3-210ENST00000540115 NLRP13Q86W25 1043 aa14.12□□□□□ -0.15
ACSL3-210ENST00000540115 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
ACSL3-210ENST00000540115 PRDM11Q9NQV5 511 aa14.12□□□□□ -0.15
ACSL3-210ENST00000540115 RGS12O14924 1447 aa14.12□□□□□ -0.15
ACSL3-210ENST00000540115 ATAD2Q6PL18 1390 aa14.11□□□□□ -0.15
ACSL3-210ENST00000540115 FAM83GA6ND36 823 aa14.11□□□□□ -0.15
ACSL3-210ENST00000540115 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.15
ACSL3-210ENST00000540115 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
ACSL3-210ENST00000540115 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
ACSL3-210ENST00000540115 TIMELESSQ9UNS1 1208 aa14.1□□□□□ -0.15
ACSL3-210ENST00000540115 MARF1Q9Y4F3 1742 aaKnown RBP14.1□□□□□ -0.15
ACSL3-210ENST00000540115 NUTM2GQ5VZR2 741 aa14.09□□□□□ -0.15
ACSL3-210ENST00000540115 BTG4Q9NY30 223 aa14.09□□□□□ -0.15
ACSL3-210ENST00000540115 RALGAPBQ86X10 1494 aa14.09□□□□□ -0.15
ACSL3-210ENST00000540115 QRICH2Q9H0J4 1663 aa14.09□□□□□ -0.15
ACSL3-210ENST00000540115 SBNO2Q9Y2G9 1366 aa14.09□□□□□ -0.15
ACSL3-210ENST00000540115 TRPM3Q9HCF6 1732 aaPredicted RBP14.08□□□□□ -0.16
ACSL3-210ENST00000540115 A0A0G2JS52 829 aa14.07□□□□□ -0.16
ACSL3-210ENST00000540115 MYT1Q01538 1121 aa14.07□□□□□ -0.16
ACSL3-210ENST00000540115 ALS2Q96Q42 1657 aa14.07□□□□□ -0.16
ACSL3-210ENST00000540115 EVA1CP58658 441 aa14.06□□□□□ -0.16
ACSL3-210ENST00000540115 NLRP6P59044 892 aa14.06□□□□□ -0.16
ACSL3-210ENST00000540115 ZC3H6P61129 1189 aaKnown RBP14.06□□□□□ -0.16
ACSL3-210ENST00000540115 CCDC125Q86Z20 511 aa14.06□□□□□ -0.16
ACSL3-210ENST00000540115 PUS7Q96PZ0 661 aaKnown RBP14.06□□□□□ -0.16
ACSL3-210ENST00000540115 TOPAZ1Q8N9V7 1692 aa14.06□□□□□ -0.16
ACSL3-210ENST00000540115 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.05□□□□□ -0.16
ACSL3-210ENST00000540115 HDGFL2Q7Z4V5 671 aaPredicted RBP14.05□□□□□ -0.16
ACSL3-210ENST00000540115 SEPT12Q8IYM1 358 aa14.05□□□□□ -0.16
ACSL3-210ENST00000540115 KIAA0232Q92628 1395 aa14.05□□□□□ -0.16
ACSL3-210ENST00000540115 USP6P35125 1406 aa14.05□□□□□ -0.16
ACSL3-210ENST00000540115 GCP02774 474 aa14.04□□□□□ -0.16
ACSL3-210ENST00000540115 TMC1Q8TDI8 760 aa14.04□□□□□ -0.16
ACSL3-210ENST00000540115 USP19O94966 1318 aa14.04□□□□□ -0.16
ACSL3-210ENST00000540115 TTC21AQ8NDW8 1320 aa14.04□□□□□ -0.16
ACSL3-210ENST00000540115 NWD2Q9ULI1 1742 aa14.04□□□□□ -0.16
ACSL3-210ENST00000540115 ONECUT3O60422 494 aaPredicted RBP14.03□□□□□ -0.16
ACSL3-210ENST00000540115 CHRNA2Q15822 529 aa14.03□□□□□ -0.16
ACSL3-210ENST00000540115 KCNH5Q8NCM2 988 aa14.03□□□□□ -0.16
ACSL3-210ENST00000540115 TERF2IPQ9NYB0 399 aa14.03□□□□□ -0.16
ACSL3-210ENST00000540115 COL14A1Q05707 1796 aaKnown RBP14.03□□□□□ -0.16
ACSL3-210ENST00000540115 CPDO75976 1380 aa14.02□□□□□ -0.17
ACSL3-210ENST00000540115 KTN1Q86UP2 1357 aaKnown RBP14.02□□□□□ -0.17
ACSL3-210ENST00000540115 TTC21BQ7Z4L5 1316 aa14.02□□□□□ -0.17
ACSL3-210ENST00000540115 SF3B2Q13435 895 aaKnown RBP14.02□□□□□ -0.17
ACSL3-210ENST00000540115 CCER1Q8TC90 406 aaPredicted RBP14.02□□□□□ -0.17
ACSL3-210ENST00000540115 STRN4Q9NRL3 753 aa14.02□□□□□ -0.17
ACSL3-210ENST00000540115 ABCA3Q99758 1704 aa14.01□□□□□ -0.17
ACSL3-210ENST00000540115 SPATA31A5Q5VU36 1347 aa14.01□□□□□ -0.17
ACSL3-210ENST00000540115 SPATA31A7Q8IWB4 1347 aa14.01□□□□□ -0.17
ACSL3-210ENST00000540115 ST20-MTHFSA0A0A6YYL1 179 aa14.01□□□□□ -0.17
ACSL3-210ENST00000540115 FAM98CQ17RN3 349 aaKnown RBP14.01□□□□□ -0.17
ACSL3-210ENST00000540115 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
ACSL3-210ENST00000540115 ZBTB7CA1YPR0 619 aa14□□□□□ -0.17
ACSL3-210ENST00000540115 TMF1P82094 1093 aa14□□□□□ -0.17
ACSL3-210ENST00000540115 KRT27Q7Z3Y8 459 aa14□□□□□ -0.17
ACSL3-210ENST00000540115 PLCH1Q4KWH8 1693 aa14□□□□□ -0.17
ACSL3-210ENST00000540115 NINLQ9Y2I6 1382 aa13.99□□□□□ -0.17
ACSL3-210ENST00000540115 GLI3P10071 1580 aa13.98□□□□□ -0.17
ACSL3-210ENST00000540115 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
ACSL3-210ENST00000540115 SSH2Q76I76 1423 aa13.98□□□□□ -0.17
ACSL3-210ENST00000540115 SPATA31A1Q5TZJ5 1347 aa13.97□□□□□ -0.17
ACSL3-210ENST00000540115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.97□□□□□ -0.171e-6■□□□□ 9.3
ACSL3-210ENST00000540115 THRAP3Q9Y2W1 955 aaKnown RBP13.97□□□□□ -0.17
ACSL3-210ENST00000540115 USP47Q96K76 1375 aa13.96□□□□□ -0.17
ACSL3-210ENST00000540115 TESK2Q96S53 571 aa13.96□□□□□ -0.17
ACSL3-210ENST00000540115 SLC12A5Q9H2X9 1139 aa13.96□□□□□ -0.17
ACSL3-210ENST00000540115 PHRF1Q9P1Y6 1649 aaKnown RBP13.96□□□□□ -0.17
ACSL3-210ENST00000540115 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.18
ACSL3-210ENST00000540115 BARGINQ6ZT62 677 aa13.95□□□□□ -0.18
ACSL3-210ENST00000540115 TCP11L2Q8N4U5 519 aa13.95□□□□□ -0.18
ACSL3-210ENST00000540115 USP35Q9P2H5 1018 aa13.95□□□□□ -0.18
ACSL3-210ENST00000540115 SOX12O15370 315 aa13.94□□□□□ -0.18
ACSL3-210ENST00000540115 BLMP54132 1417 aaPredicted RBP13.94□□□□□ -0.18
ACSL3-210ENST00000540115 PDE3BQ13370 1112 aa13.94□□□□□ -0.18
ACSL3-210ENST00000540115 NRKQ7Z2Y5 1582 aa13.94□□□□□ -0.18
ACSL3-210ENST00000540115 CRYBG1Q9Y4K1 1723 aa13.94□□□□□ -0.18
ACSL3-210ENST00000540115 NRAPQ86VF7 1730 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms