RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 NUTM2FA1L443 756 aa9.88□□□□□ -0.83
LPCAT3-209ENST00000540060 ORAI2Q96SN7 254 aa9.88□□□□□ -0.83
LPCAT3-209ENST00000540060 CRYBG1Q9Y4K1 1723 aa9.87□□□□□ -0.83
LPCAT3-209ENST00000540060 HSPA1LP34931 641 aa9.87□□□□□ -0.83
LPCAT3-209ENST00000540060 LCE2DQ5TA82 110 aaPredicted RBP9.87□□□□□ -0.83
LPCAT3-209ENST00000540060 ST20-MTHFSA0A0A6YYL1 179 aa9.86□□□□□ -0.83
LPCAT3-209ENST00000540060 TESK2Q96S53 571 aa9.86□□□□□ -0.83
LPCAT3-209ENST00000540060 CDK19Q9BWU1 502 aa9.86□□□□□ -0.83
LPCAT3-209ENST00000540060 EVC2Q86UK5 1308 aa9.85□□□□□ -0.83
LPCAT3-209ENST00000540060 MARF1Q9Y4F3 1742 aaKnown RBP9.85□□□□□ -0.83
LPCAT3-209ENST00000540060 PPIP5K1Q6PFW1 1433 aa9.85□□□□□ -0.83
LPCAT3-209ENST00000540060 ESCO1Q5FWF5 840 aa9.85□□□□□ -0.83
LPCAT3-209ENST00000540060 DISP3Q9P2K9 1392 aa9.85□□□□□ -0.83
LPCAT3-209ENST00000540060 DDX17Q92841 729 aaKnown RBP9.84□□□□□ -0.83
LPCAT3-209ENST00000540060 NUDT16Q96DE0 195 aaKnown RBP9.84□□□□□ -0.83
LPCAT3-209ENST00000540060 POLR3AO14802 1390 aaPredicted RBP9.84□□□□□ -0.83
LPCAT3-209ENST00000540060 SOS2Q07890 1332 aaPredicted RBP9.83□□□□□ -0.84
LPCAT3-209ENST00000540060 NPHP3Q7Z494 1330 aa9.83□□□□□ -0.84
LPCAT3-209ENST00000540060 PHRF1Q9P1Y6 1649 aaKnown RBP9.83□□□□□ -0.84
LPCAT3-209ENST00000540060 SRPK2P78362 688 aaKnown RBP9.83□□□□□ -0.84
LPCAT3-209ENST00000540060 CABP2Q9NPB3 220 aa9.83□□□□□ -0.84
LPCAT3-209ENST00000540060 PHF8Q9UPP1 1060 aa9.83□□□□□ -0.84
LPCAT3-209ENST00000540060 ATAD2Q6PL18 1390 aa9.83□□□□□ -0.84
LPCAT3-209ENST00000540060 MED1Q15648 1581 aaPredicted RBP9.83□□□□□ -0.84
LPCAT3-209ENST00000540060 PIK3C2AO00443 1686 aa9.83□□□□□ -0.84
LPCAT3-209ENST00000540060 USP54Q70EL1 1684 aa9.83□□□□□ -0.84
LPCAT3-209ENST00000540060 CD163L1Q9NR16 1453 aa9.82□□□□□ -0.84
LPCAT3-209ENST00000540060 TNS3Q68CZ2 1445 aa9.82□□□□□ -0.84
LPCAT3-209ENST00000540060 PNPLA6Q8IY17 1366 aa9.81□□□□□ -0.84
LPCAT3-209ENST00000540060 JCADQ9P266 1359 aa9.81□□□□□ -0.84
LPCAT3-209ENST00000540060 FOXO3O43524 673 aa9.81□□□□□ -0.84
LPCAT3-209ENST00000540060 HSPA5P11021 654 aaKnown RBP9.81□□□□□ -0.84
LPCAT3-209ENST00000540060 EIF4G2P78344 907 aaKnown RBP eCLIP9.81□□□□□ -0.84
LPCAT3-209ENST00000540060 PMFBP1Q8TBY8 1022 aa9.81□□□□□ -0.84
LPCAT3-209ENST00000540060 CCDC61Q9Y6R9 512 aa9.81□□□□□ -0.84
LPCAT3-209ENST00000540060 KIF20BQ96Q89 1820 aa9.8□□□□□ -0.84
LPCAT3-209ENST00000540060 SBNO1A3KN83 1393 aa9.8□□□□□ -0.84
LPCAT3-209ENST00000540060 PLEKHG3A1L390 1219 aa9.8□□□□□ -0.84
LPCAT3-209ENST00000540060 SLC24A1O60721 1099 aa9.8□□□□□ -0.84
LPCAT3-209ENST00000540060 LRP6O75581 1613 aa9.8□□□□□ -0.84
LPCAT3-209ENST00000540060 USP6P35125 1406 aa9.8□□□□□ -0.84
LPCAT3-209ENST00000540060 CPSF1Q10570 1443 aaKnown RBP9.8□□□□□ -0.84
LPCAT3-209ENST00000540060 NINLQ9Y2I6 1382 aa9.79□□□□□ -0.84
LPCAT3-209ENST00000540060 XPCQ01831 940 aaPredicted RBP9.79□□□□□ -0.84
LPCAT3-209ENST00000540060 PUS7Q96PZ0 661 aaKnown RBP9.79□□□□□ -0.84
LPCAT3-209ENST00000540060 ACEP12821 1306 aa9.79□□□□□ -0.84
LPCAT3-209ENST00000540060 TMF1P82094 1093 aa9.78□□□□□ -0.84
LPCAT3-209ENST00000540060 LRRC59Q96AG4 307 aaKnown RBP9.78□□□□□ -0.84
LPCAT3-209ENST00000540060 SSH2Q76I76 1423 aa9.78□□□□□ -0.84
LPCAT3-209ENST00000540060 SPATA31A3Q5VYP0 1347 aa9.78□□□□□ -0.84
LPCAT3-209ENST00000540060 PLCH1Q4KWH8 1693 aa9.77□□□□□ -0.84
LPCAT3-209ENST00000540060 ANKRD26Q9UPS8 1709 aa9.77□□□□□ -0.85
LPCAT3-209ENST00000540060 KRT28Q7Z3Y7 464 aa9.77□□□□□ -0.85
LPCAT3-209ENST00000540060 NGDNQ8NEJ9 315 aaKnown RBP9.77□□□□□ -0.85
LPCAT3-209ENST00000540060 CABP1Q9NZU7 370 aa9.77□□□□□ -0.85
LPCAT3-209ENST00000540060 A0A1W2PP64 1363 aa9.76□□□□□ -0.85
LPCAT3-209ENST00000540060 ARHGEF10O15013 1369 aa9.76□□□□□ -0.85
LPCAT3-209ENST00000540060 BRD4O60885 1362 aaPredicted RBP9.76□□□□□ -0.85
LPCAT3-209ENST00000540060 PSME1Q06323 249 aa9.76□□□□□ -0.85
LPCAT3-209ENST00000540060 SPATA31A6Q5VVP1 1343 aa9.76□□□□□ -0.85
LPCAT3-209ENST00000540060 CDCA8Q53HL2 280 aa9.75□□□□□ -0.85
LPCAT3-209ENST00000540060 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.75□□□□□ -0.85
LPCAT3-209ENST00000540060 SLIT3O75094 1523 aa9.75□□□□□ -0.85
LPCAT3-209ENST00000540060 KTN1Q86UP2 1357 aaKnown RBP9.75□□□□□ -0.85
LPCAT3-209ENST00000540060 ANKRD36BQ8N2N9 1353 aa9.75□□□□□ -0.85
LPCAT3-209ENST00000540060 EDC4Q6P2E9 1401 aaKnown RBP9.74□□□□□ -0.85
LPCAT3-209ENST00000540060 NWD2Q9ULI1 1742 aa9.74□□□□□ -0.85
LPCAT3-209ENST00000540060 LTN1O94822 1766 aa9.74□□□□□ -0.85
LPCAT3-209ENST00000540060 NRAPQ86VF7 1730 aa9.73□□□□□ -0.85
LPCAT3-209ENST00000540060 COL14A1Q05707 1796 aaKnown RBP9.73□□□□□ -0.85
LPCAT3-209ENST00000540060 ZEB1P37275 1124 aaPredicted RBP9.73□□□□□ -0.85
LPCAT3-209ENST00000540060 CDAN1Q8IWY9 1227 aa9.73□□□□□ -0.85
LPCAT3-209ENST00000540060 TMC1Q8TDI8 760 aa9.73□□□□□ -0.85
LPCAT3-209ENST00000540060 FAM163AQ96GL9 167 aaPredicted RBP9.73□□□□□ -0.85
LPCAT3-209ENST00000540060 SLC12A5Q9H2X9 1139 aa9.73□□□□□ -0.85
LPCAT3-209ENST00000540060 LMO7Q8WWI1 1683 aa9.72□□□□□ -0.85
LPCAT3-209ENST00000540060 C11orf95C9JLR9 678 aaPredicted RBP9.72□□□□□ -0.85
LPCAT3-209ENST00000540060 ZNF692Q9BU19 519 aaPredicted RBP9.72□□□□□ -0.85
LPCAT3-209ENST00000540060 KIF7Q2M1P5 1343 aa9.72□□□□□ -0.85
LPCAT3-209ENST00000540060 NFAT5O94916 1531 aa9.72□□□□□ -0.85
LPCAT3-209ENST00000540060 PAK3O75914 559 aaPredicted RBP9.71□□□□□ -0.86
LPCAT3-209ENST00000540060 HDGFL2Q7Z4V5 671 aaPredicted RBP9.71□□□□□ -0.86
LPCAT3-209ENST00000540060 TERF2IPQ9NYB0 399 aa9.71□□□□□ -0.86
LPCAT3-209ENST00000540060 USP19O94966 1318 aa9.71□□□□□ -0.86
LPCAT3-209ENST00000540060 TTC21BQ7Z4L5 1316 aa9.71□□□□□ -0.86
LPCAT3-209ENST00000540060 TTC21AQ8NDW8 1320 aa9.71□□□□□ -0.86
LPCAT3-209ENST00000540060 OVOS2A0A0J9YW53 1432 aa9.71□□□□□ -0.86
LPCAT3-209ENST00000540060 OVOS2Q6IE36 1432 aa9.71□□□□□ -0.86
LPCAT3-209ENST00000540060 LMOD2Q6P5Q4 547 aa9.7□□□□□ -0.86
LPCAT3-209ENST00000540060 CCDC7Q96M83 1385 aa9.7□□□□□ -0.86
LPCAT3-209ENST00000540060 COL18A1P39060 1754 aa9.7□□□□□ -0.86
LPCAT3-209ENST00000540060 RGPD5Q99666 1765 aa9.7□□□□□ -0.86
LPCAT3-209ENST00000540060 NUTM2BA6NNL0 878 aaPredicted RBP9.69□□□□□ -0.86
LPCAT3-209ENST00000540060 NUTM2EB1AL46 878 aaPredicted RBP9.69□□□□□ -0.86
LPCAT3-209ENST00000540060 CD44P16070 742 aaKnown RBP9.69□□□□□ -0.86
LPCAT3-209ENST00000540060 NUTM2AQ8IVF1 878 aaPredicted RBP9.69□□□□□ -0.86
LPCAT3-209ENST00000540060 CABLES1Q8TDN4 633 aa9.69□□□□□ -0.86
LPCAT3-209ENST00000540060 NSD3Q9BZ95 1437 aa9.69□□□□□ -0.86
LPCAT3-209ENST00000540060 CLEC11AQ9Y240 323 aa9.69□□□□□ -0.86
LPCAT3-209ENST00000540060 SLIT2O94813 1529 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms