RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 NPHP1O15259 732 aa10.61□□□□□ -0.71
GNE-205ENST00000539815 UBE2Q2Q8WVN8 375 aa10.61□□□□□ -0.71
GNE-205ENST00000539815 CDK19Q9BWU1 502 aa10.61□□□□□ -0.71
GNE-205ENST00000539815 AMPHP49418 695 aa10.6□□□□□ -0.71
GNE-205ENST00000539815 KCNH5Q8NCM2 988 aa10.6□□□□□ -0.71
GNE-205ENST00000539815 ZNF526Q8TF50 670 aaPredicted RBP10.6□□□□□ -0.71
GNE-205ENST00000539815 AMER1Q5JTC6 1135 aaPredicted RBP10.59□□□□□ -0.71
GNE-205ENST00000539815 GRIN3BO60391 1043 aa10.59□□□□□ -0.71
GNE-205ENST00000539815 ACSBG1Q96GR2 724 aa10.59□□□□□ -0.71
GNE-205ENST00000539815 RALGAPBQ86X10 1494 aa10.59□□□□□ -0.71
GNE-205ENST00000539815 ARXQ96QS3 562 aa10.59□□□□□ -0.71
GNE-205ENST00000539815 GPBP1L1Q9HC44 474 aaPredicted RBP10.59□□□□□ -0.71
GNE-205ENST00000539815 LMTK2Q8IWU2 1503 aa10.58□□□□□ -0.72
GNE-205ENST00000539815 TNS3Q68CZ2 1445 aa10.58□□□□□ -0.72
GNE-205ENST00000539815 ABCC11Q96J66 1382 aa10.58□□□□□ -0.72
GNE-205ENST00000539815 DIP2AQ14689 1571 aa10.58□□□□□ -0.72
GNE-205ENST00000539815 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.58□□□□□ -0.72
GNE-205ENST00000539815 C14orf93Q9H972 538 aaKnown RBP10.58□□□□□ -0.72
GNE-205ENST00000539815 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
GNE-205ENST00000539815 LARP1Q6PKG0 1096 aaKnown RBP10.57□□□□□ -0.72
GNE-205ENST00000539815 ATRNO75882 1429 aa10.57□□□□□ -0.72
GNE-205ENST00000539815 KIAA0232Q92628 1395 aa10.57□□□□□ -0.72
GNE-205ENST00000539815 GCP02774 474 aa10.56□□□□□ -0.72
GNE-205ENST00000539815 PARD3Q8TEW0 1356 aa10.56□□□□□ -0.72
GNE-205ENST00000539815 RAPGEF4Q8WZA2 1011 aa10.56□□□□□ -0.72
GNE-205ENST00000539815 THRAP3Q9Y2W1 955 aaKnown RBP10.56□□□□□ -0.72
GNE-205ENST00000539815 SPATA31A5Q5VU36 1347 aa10.56□□□□□ -0.72
GNE-205ENST00000539815 EVC2Q86UK5 1308 aa10.56□□□□□ -0.72
GNE-205ENST00000539815 SPATA31A7Q8IWB4 1347 aa10.56□□□□□ -0.72
GNE-205ENST00000539815 SIRT1Q96EB6 747 aa10.56□□□□□ -0.72
GNE-205ENST00000539815 SBNO1A3KN83 1393 aa10.56□□□□□ -0.72
GNE-205ENST00000539815 ADGRL2O95490 1459 aa10.55□□□□□ -0.72
GNE-205ENST00000539815 KDM5AP29375 1690 aaKnown RBP10.55□□□□□ -0.72
GNE-205ENST00000539815 SETD1AO15047 1707 aaKnown RBP10.55□□□□□ -0.72
GNE-205ENST00000539815 MROH1Q8NDA8 1641 aa10.55□□□□□ -0.72
GNE-205ENST00000539815 PPM1GO15355 546 aaPredicted RBP10.55□□□□□ -0.72
GNE-205ENST00000539815 ACEP12821 1306 aa10.55□□□□□ -0.72
GNE-205ENST00000539815 AHDC1Q5TGY3 1603 aaPredicted RBP10.55□□□□□ -0.72
GNE-205ENST00000539815 NCBP3Q53F19 620 aaKnown RBP10.54□□□□□ -0.72
GNE-205ENST00000539815 YTHDC2Q9H6S0 1430 aaKnown RBP10.54□□□□□ -0.72
GNE-205ENST00000539815 ZNF692Q9BU19 519 aaPredicted RBP10.54□□□□□ -0.72
GNE-205ENST00000539815 MTFR1LQ9H019 292 aa10.54□□□□□ -0.72
GNE-205ENST00000539815 TERF2IPQ9NYB0 399 aa10.54□□□□□ -0.72
GNE-205ENST00000539815 CCDC136Q96JN2 1154 aa10.54□□□□□ -0.72
GNE-205ENST00000539815 CABP2Q9NPB3 220 aa10.54□□□□□ -0.72
GNE-205ENST00000539815 WWC3Q9ULE0 1092 aa10.54□□□□□ -0.72
GNE-205ENST00000539815 LRRIQ1Q96JM4 1722 aa10.53□□□□□ -0.72
GNE-205ENST00000539815 CENPJQ9HC77 1338 aaPredicted RBP10.53□□□□□ -0.72
GNE-205ENST00000539815 TXNRD1Q16881 649 aa10.53□□□□□ -0.72
GNE-205ENST00000539815 NWD1Q149M9 1564 aa10.53□□□□□ -0.72
GNE-205ENST00000539815 SPATA31A1Q5TZJ5 1347 aa10.52□□□□□ -0.73
GNE-205ENST00000539815 FHDC1Q9C0D6 1143 aaPredicted RBP10.52□□□□□ -0.73
GNE-205ENST00000539815 COL16A1Q07092 1604 aaPredicted RBP10.51□□□□□ -0.73
GNE-205ENST00000539815 CAPN15O75808 1086 aa10.51□□□□□ -0.73
GNE-205ENST00000539815 CABP1Q9NZU7 370 aa10.51□□□□□ -0.73
GNE-205ENST00000539815 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.51□□□□□ -0.73
GNE-205ENST00000539815 TET3O43151 1660 aa10.51□□□□□ -0.73
GNE-205ENST00000539815 ADRA2BP18089 450 aa10.51□□□□□ -0.73
GNE-205ENST00000539815 AK7Q96M32 723 aa10.51□□□□□ -0.73
GNE-205ENST00000539815 PLEKHH1Q9ULM0 1364 aa10.5□□□□□ -0.73
GNE-205ENST00000539815 NINLQ9Y2I6 1382 aa10.5□□□□□ -0.73
GNE-205ENST00000539815 C1QTNF8P60827 252 aa10.49□□□□□ -0.73
GNE-205ENST00000539815 SLC15A2Q16348 729 aa10.49□□□□□ -0.73
GNE-205ENST00000539815 BARGINQ6ZT62 677 aa10.49□□□□□ -0.73
GNE-205ENST00000539815 ZNF784Q8NCA9 323 aaPredicted RBP10.49□□□□□ -0.73
GNE-205ENST00000539815 SYT17Q9BSW7 474 aa10.49□□□□□ -0.73
GNE-205ENST00000539815 IL2RBP14784 551 aa10.48□□□□□ -0.73
GNE-205ENST00000539815 SLC16A10Q8TF71 515 aa10.48□□□□□ -0.73
GNE-205ENST00000539815 CAMKK2Q96RR4 588 aa10.48□□□□□ -0.73
GNE-205ENST00000539815 BCL9LQ86UU0 1499 aa10.48□□□□□ -0.73
GNE-205ENST00000539815 COG3Q96JB2 828 aa10.48□□□□□ -0.73
GNE-205ENST00000539815 PKNOX2Q96KN3 472 aa10.47□□□□□ -0.73
GNE-205ENST00000539815 ONECUT3O60422 494 aaPredicted RBP10.47□□□□□ -0.73
GNE-205ENST00000539815 SALL2Q9Y467 1007 aaPredicted RBP10.47□□□□□ -0.73
GNE-205ENST00000539815 TATP17735 454 aaPredicted RBP10.47□□□□□ -0.73
GNE-205ENST00000539815 FLAD1Q8NFF5 587 aa10.47□□□□□ -0.73
GNE-205ENST00000539815 CCNL1Q9UK58 526 aaPredicted RBP10.47□□□□□ -0.73
GNE-205ENST00000539815 OVOS2A0A0G2JMS6 1433 aa10.46□□□□□ -0.73
GNE-205ENST00000539815 OVOS2A0A0J9YW53 1432 aa10.46□□□□□ -0.73
GNE-205ENST00000539815 OVOS2Q6IE36 1432 aa10.46□□□□□ -0.73
GNE-205ENST00000539815 PLSCR1O15162 318 aa10.46□□□□□ -0.74
GNE-205ENST00000539815 CARD11Q9BXL7 1154 aa10.46□□□□□ -0.74
GNE-205ENST00000539815 SETBP1Q9Y6X0 1596 aa10.45□□□□□ -0.74
GNE-205ENST00000539815 STRCP1A6NGW2 1772 aa10.45□□□□□ -0.74
GNE-205ENST00000539815 BRD4O60885 1362 aaPredicted RBP10.45□□□□□ -0.74
GNE-205ENST00000539815 CFAP44Q96MT7 982 aa10.44□□□□□ -0.74
GNE-205ENST00000539815 MYOM2P54296 1465 aa10.44□□□□□ -0.74
GNE-205ENST00000539815 GCC2Q8IWJ2 1684 aa10.44□□□□□ -0.74
GNE-205ENST00000539815 PHF14O94880 888 aa10.44□□□□□ -0.74
GNE-205ENST00000539815 MSL1Q68DK7 614 aa10.44□□□□□ -0.74
GNE-205ENST00000539815 CDCA8Q53HL2 280 aa10.43□□□□□ -0.74
GNE-205ENST00000539815 ANKARQ7Z5J8 1434 aa10.43□□□□□ -0.74
GNE-205ENST00000539815 ALKQ9UM73 1620 aa10.42□□□□□ -0.74
GNE-205ENST00000539815 SMARCC1Q92922 1105 aaPredicted RBP10.42□□□□□ -0.74
GNE-205ENST00000539815 BCS1LQ9Y276 419 aa10.42□□□□□ -0.74
GNE-205ENST00000539815 TMEM131LA2VDJ0 1609 aa10.42□□□□□ -0.74
GNE-205ENST00000539815 USP47Q96K76 1375 aa10.42□□□□□ -0.74
GNE-205ENST00000539815 CARD10Q9BWT7 1032 aa10.42□□□□□ -0.74
GNE-205ENST00000539815 SHPRHQ149N8 1683 aa10.42□□□□□ -0.74
GNE-205ENST00000539815 CHD2O14647 1828 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms