RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 STAC3Q96MF2 364 aa11.94□□□□□ -0.5
CD4-209ENST00000539492 WASLO00401 505 aaPredicted RBP11.93□□□□□ -0.5
CD4-209ENST00000539492 BTG4Q9NY30 223 aa11.93□□□□□ -0.5
CD4-209ENST00000539492 THSD7AQ9UPZ6 1657 aa11.93□□□□□ -0.5
CD4-209ENST00000539492 ATP7BP35670 1465 aa11.92□□□□□ -0.5
CD4-209ENST00000539492 A0A0G2JS52 829 aa11.92□□□□□ -0.5
CD4-209ENST00000539492 MYT1Q01538 1121 aa11.92□□□□□ -0.5
CD4-209ENST00000539492 FAM98CQ17RN3 349 aaKnown RBP11.92□□□□□ -0.5
CD4-209ENST00000539492 DCAF11Q8TEB1 546 aa11.92□□□□□ -0.5
CD4-209ENST00000539492 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
CD4-209ENST00000539492 PHRF1Q9P1Y6 1649 aaKnown RBP11.92□□□□□ -0.5
CD4-209ENST00000539492 KIAA1210Q9ULL0 1709 aa11.91□□□□□ -0.5
CD4-209ENST00000539492 TOPAZ1Q8N9V7 1692 aa11.91□□□□□ -0.5
CD4-209ENST00000539492 BAG6P46379 1132 aa11.91□□□□□ -0.5
CD4-209ENST00000539492 NGDNQ8NEJ9 315 aaKnown RBP11.91□□□□□ -0.5
CD4-209ENST00000539492 TNS1Q9HBL0 1735 aaKnown RBP11.91□□□□□ -0.5
CD4-209ENST00000539492 SPATA31A5Q5VU36 1347 aa11.9□□□□□ -0.5
CD4-209ENST00000539492 SPATA31A7Q8IWB4 1347 aa11.9□□□□□ -0.5
CD4-209ENST00000539492 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
CD4-209ENST00000539492 PRDM11Q9NQV5 511 aa11.89□□□□□ -0.51
CD4-209ENST00000539492 HRCP23327 699 aa11.88□□□□□ -0.51
CD4-209ENST00000539492 DISP2A7MBM2 1401 aa11.87□□□□□ -0.51
CD4-209ENST00000539492 NUDT16Q96DE0 195 aaKnown RBP11.87□□□□□ -0.51
CD4-209ENST00000539492 POLR3AO14802 1390 aaPredicted RBP11.86□□□□□ -0.51
CD4-209ENST00000539492 KIAA0232Q92628 1395 aa11.86□□□□□ -0.51
CD4-209ENST00000539492 NRKQ7Z2Y5 1582 aa11.85□□□□□ -0.51
CD4-209ENST00000539492 SPATA31A1Q5TZJ5 1347 aa11.85□□□□□ -0.51
CD4-209ENST00000539492 PSDA5PKW4 1024 aaPredicted RBP11.84□□□□□ -0.51
CD4-209ENST00000539492 EN1Q05925 392 aaPredicted RBP11.84□□□□□ -0.51
CD4-209ENST00000539492 CDK19Q9BWU1 502 aa11.84□□□□□ -0.51
CD4-209ENST00000539492 CHRNA2Q15822 529 aa11.83□□□□□ -0.52
CD4-209ENST00000539492 FAM182BQ5T319 152 aa11.83□□□□□ -0.52
CD4-209ENST00000539492 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
CD4-209ENST00000539492 LMO7Q8WWI1 1683 aa11.83□□□□□ -0.52
CD4-209ENST00000539492 ACEP12821 1306 aa11.83□□□□□ -0.52
CD4-209ENST00000539492 RREB1Q92766 1687 aa11.82□□□□□ -0.52
CD4-209ENST00000539492 QRICH2Q9H0J4 1663 aa11.82□□□□□ -0.52
CD4-209ENST00000539492 PLEKHG3A1L390 1219 aa11.82□□□□□ -0.52
CD4-209ENST00000539492 NBPF8Q3BBV2 869 aa11.82□□□□□ -0.52
CD4-209ENST00000539492 FAM196AQ6ZSG2 479 aa11.82□□□□□ -0.52
CD4-209ENST00000539492 STRN4Q9NRL3 753 aa11.82□□□□□ -0.52
CD4-209ENST00000539492 SSH2Q76I76 1423 aa11.82□□□□□ -0.52
CD4-209ENST00000539492 CPDO75976 1380 aa11.81□□□□□ -0.52
CD4-209ENST00000539492 PARP4Q9UKK3 1724 aaKnown RBP11.81□□□□□ -0.52
CD4-209ENST00000539492 ZC3H6P61129 1189 aaKnown RBP11.81□□□□□ -0.52
CD4-209ENST00000539492 NUTM2GQ5VZR2 741 aa11.81□□□□□ -0.52
CD4-209ENST00000539492 USP19O94966 1318 aa11.81□□□□□ -0.52
CD4-209ENST00000539492 CAMTA1Q9Y6Y1 1673 aa11.81□□□□□ -0.52
CD4-209ENST00000539492 PARD3Q8TEW0 1356 aa11.8□□□□□ -0.52
CD4-209ENST00000539492 NUP188Q5SRE5 1749 aa11.8□□□□□ -0.52
CD4-209ENST00000539492 BARGINQ6ZT62 677 aa11.8□□□□□ -0.52
CD4-209ENST00000539492 SBF2Q86WG5 1849 aa11.79□□□□□ -0.52
CD4-209ENST00000539492 TRIM37O94972 964 aa11.79□□□□□ -0.52
CD4-209ENST00000539492 EVA1CP58658 441 aa11.79□□□□□ -0.52
CD4-209ENST00000539492 R3HDM1Q15032 1099 aaKnown RBP11.79□□□□□ -0.52
CD4-209ENST00000539492 ABTB2Q8N961 1025 aa11.79□□□□□ -0.52
CD4-209ENST00000539492 BRD4O60885 1362 aaPredicted RBP11.79□□□□□ -0.52
CD4-209ENST00000539492 PPIP5K1Q6PFW1 1433 aa11.78□□□□□ -0.52
CD4-209ENST00000539492 EZH2Q15910 746 aaKnown RBP11.78□□□□□ -0.52
CD4-209ENST00000539492 CAMKK2Q96RR4 588 aa11.78□□□□□ -0.52
CD4-209ENST00000539492 USP35Q9P2H5 1018 aa11.78□□□□□ -0.52
CD4-209ENST00000539492 WNK3Q9BYP7 1800 aa11.78□□□□□ -0.52
CD4-209ENST00000539492 CENPJQ9HC77 1338 aaPredicted RBP11.78□□□□□ -0.52
CD4-209ENST00000539492 SRPK2P78362 688 aaKnown RBP11.77□□□□□ -0.53
CD4-209ENST00000539492 PDE3BQ13370 1112 aa11.77□□□□□ -0.53
CD4-209ENST00000539492 NBPF1Q3BBV0 1214 aa11.77□□□□□ -0.53
CD4-209ENST00000539492 LARP1Q6PKG0 1096 aaKnown RBP11.77□□□□□ -0.53
CD4-209ENST00000539492 NLRP13Q86W25 1043 aa11.77□□□□□ -0.53
CD4-209ENST00000539492 TCP11L2Q8N4U5 519 aa11.77□□□□□ -0.53
CD4-209ENST00000539492 RGPD3A6NKT7 1758 aaPredicted RBP11.77□□□□□ -0.53
CD4-209ENST00000539492 RGPD4Q7Z3J3 1758 aa11.77□□□□□ -0.53
CD4-209ENST00000539492 COL5A2P05997 1499 aaPredicted RBP11.76□□□□□ -0.53
CD4-209ENST00000539492 KAT6BQ8WYB5 2073 aa11.76□□□□□ -0.53
CD4-209ENST00000539492 THRAP3Q9Y2W1 955 aaKnown RBP11.76□□□□□ -0.53
CD4-209ENST00000539492 SLIT3O75094 1523 aa11.76□□□□□ -0.53
CD4-209ENST00000539492 PIK3C2AO00443 1686 aa11.75□□□□□ -0.53
CD4-209ENST00000539492 COL18A1P39060 1754 aa11.75□□□□□ -0.53
CD4-209ENST00000539492 AKAP12Q02952 1782 aa11.75□□□□□ -0.53
CD4-209ENST00000539492 APBA3O96018 575 aa11.75□□□□□ -0.53
CD4-209ENST00000539492 GCP02774 474 aa11.75□□□□□ -0.53
CD4-209ENST00000539492 USP6P35125 1406 aa11.75□□□□□ -0.53
CD4-209ENST00000539492 PEAK1Q9H792 1746 aa11.74□□□□□ -0.53
CD4-209ENST00000539492 RGPD5Q99666 1765 aa11.74□□□□□ -0.53
CD4-209ENST00000539492 CABP2Q9NPB3 220 aa11.74□□□□□ -0.53
CD4-209ENST00000539492 CRB1P82279 1406 aa11.74□□□□□ -0.53
CD4-209ENST00000539492 LRRC37A3O60309 1634 aa11.74□□□□□ -0.53
CD4-209ENST00000539492 TRPM1Q7Z4N2 1603 aa11.74□□□□□ -0.53
CD4-209ENST00000539492 C11orf95C9JLR9 678 aaPredicted RBP11.73□□□□□ -0.53
CD4-209ENST00000539492 OVOS2A0A0G2JMS6 1433 aa11.72□□□□□ -0.53
CD4-209ENST00000539492 OVOS2A0A0J9YW53 1432 aa11.72□□□□□ -0.53
CD4-209ENST00000539492 OVOS2Q6IE36 1432 aa11.72□□□□□ -0.53
CD4-209ENST00000539492 AATKQ6ZMQ8 1374 aa11.72□□□□□ -0.53
CD4-209ENST00000539492 NLRP6P59044 892 aa11.71□□□□□ -0.53
CD4-209ENST00000539492 NBPF14Q5TI25 921 aa11.71□□□□□ -0.53
CD4-209ENST00000539492 CABP1Q9NZU7 370 aa11.71□□□□□ -0.53
CD4-209ENST00000539492 EVC2Q86UK5 1308 aa11.7□□□□□ -0.54
CD4-209ENST00000539492 ZBTB7CA1YPR0 619 aa11.69□□□□□ -0.54
CD4-209ENST00000539492 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
CD4-209ENST00000539492 CPSF1Q10570 1443 aaKnown RBP11.69□□□□□ -0.54
CD4-209ENST00000539492 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms