RNA–Protein interactions for RNA: ENST00000539121.1

USP30-210, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 4

Gene USP30, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-210ENST00000539121 GPRASP1Q5JY77 1395 aa9.21□□□□□ -0.94
USP30-210ENST00000539121 SAFB2Q14151 953 aaKnown RBP eCLIP9.2□□□□□ -0.94
USP30-210ENST00000539121 PMFBP1Q8TBY8 1022 aa9.2□□□□□ -0.94
USP30-210ENST00000539121 CCDC9Q9Y3X0 531 aaKnown RBP9.2□□□□□ -0.94
USP30-210ENST00000539121 PLCH1Q4KWH8 1693 aa9.2□□□□□ -0.94
USP30-210ENST00000539121 DEFB132Q7Z7B7 95 aa9.19□□□□□ -0.94
USP30-210ENST00000539121 ADGRB1O14514 1584 aa9.19□□□□□ -0.94
USP30-210ENST00000539121 ABCA3Q99758 1704 aa9.19□□□□□ -0.94
USP30-210ENST00000539121 WASLO00401 505 aaPredicted RBP9.18□□□□□ -0.94
USP30-210ENST00000539121 BAG6P46379 1132 aa9.18□□□□□ -0.94
USP30-210ENST00000539121 BTG4Q9NY30 223 aa9.18□□□□□ -0.94
USP30-210ENST00000539121 TRAK1Q9UPV9 953 aa9.18□□□□□ -0.94
USP30-210ENST00000539121 COL14A1Q05707 1796 aaKnown RBP9.17□□□□□ -0.94
USP30-210ENST00000539121 TRPM3Q9HCF6 1732 aaPredicted RBP9.17□□□□□ -0.94
USP30-210ENST00000539121 ALS2Q96Q42 1657 aa9.17□□□□□ -0.94
USP30-210ENST00000539121 TULP4Q9NRJ4 1543 aa9.17□□□□□ -0.94
USP30-210ENST00000539121 RAB3GAP2Q9H2M9 1393 aa9.17□□□□□ -0.94
USP30-210ENST00000539121 SPATA31A5Q5VU36 1347 aa9.16□□□□□ -0.94
USP30-210ENST00000539121 SPATA31A7Q8IWB4 1347 aa9.16□□□□□ -0.94
USP30-210ENST00000539121 PRR36Q9H6K5 1346 aa9.16□□□□□ -0.94
USP30-210ENST00000539121 FAM98CQ17RN3 349 aaKnown RBP9.16□□□□□ -0.94
USP30-210ENST00000539121 NGDNQ8NEJ9 315 aaKnown RBP9.16□□□□□ -0.94
USP30-210ENST00000539121 DCAF11Q8TEB1 546 aa9.16□□□□□ -0.94
USP30-210ENST00000539121 HIRIP3Q9BW71 556 aaPredicted RBP9.16□□□□□ -0.94
USP30-210ENST00000539121 NRAPQ86VF7 1730 aa9.16□□□□□ -0.94
USP30-210ENST00000539121 MINK1Q8N4C8 1332 aaPredicted RBP9.15□□□□□ -0.94
USP30-210ENST00000539121 A0A0G2JS52 829 aa9.15□□□□□ -0.94
USP30-210ENST00000539121 PLEKHG5O94827 1062 aa9.15□□□□□ -0.94
USP30-210ENST00000539121 MYT1Q01538 1121 aa9.15□□□□□ -0.94
USP30-210ENST00000539121 KDM2AQ9Y2K7 1162 aa9.15□□□□□ -0.94
USP30-210ENST00000539121 LRP5O75197 1615 aa9.14□□□□□ -0.95
USP30-210ENST00000539121 PAK3O75914 559 aaPredicted RBP9.14□□□□□ -0.95
USP30-210ENST00000539121 PRDM11Q9NQV5 511 aa9.14□□□□□ -0.95
USP30-210ENST00000539121 DISP2A7MBM2 1401 aa9.14□□□□□ -0.95
USP30-210ENST00000539121 NUDT16Q96DE0 195 aaKnown RBP9.13□□□□□ -0.95
USP30-210ENST00000539121 ITSN1Q15811 1721 aa9.13□□□□□ -0.95
USP30-210ENST00000539121 ATP7BP35670 1465 aa9.13□□□□□ -0.95
USP30-210ENST00000539121 SPATA31A1Q5TZJ5 1347 aa9.12□□□□□ -0.95
USP30-210ENST00000539121 RGPD1P0DJD0 1748 aa9.12□□□□□ -0.95
USP30-210ENST00000539121 CRYBG1Q9Y4K1 1723 aa9.12□□□□□ -0.95
USP30-210ENST00000539121 FAM196AQ6ZSG2 479 aa9.12□□□□□ -0.95
USP30-210ENST00000539121 CCDC61Q9Y6R9 512 aa9.12□□□□□ -0.95
USP30-210ENST00000539121 THSD7AQ9UPZ6 1657 aa9.12□□□□□ -0.95
USP30-210ENST00000539121 POLR3AO14802 1390 aaPredicted RBP9.12□□□□□ -0.95
USP30-210ENST00000539121 KIAA0232Q92628 1395 aa9.12□□□□□ -0.95
USP30-210ENST00000539121 PLEKHG3A1L390 1219 aa9.11□□□□□ -0.95
USP30-210ENST00000539121 EN1Q05925 392 aaPredicted RBP9.11□□□□□ -0.95
USP30-210ENST00000539121 SPINK5Q9NQ38 1064 aaPredicted RBP9.11□□□□□ -0.95
USP30-210ENST00000539121 ARHGEF28Q8N1W1 1705 aaKnown RBP9.11□□□□□ -0.95
USP30-210ENST00000539121 PARD3Q8TEW0 1356 aa9.11□□□□□ -0.95
USP30-210ENST00000539121 NBPF8Q3BBV2 869 aa9.1□□□□□ -0.95
USP30-210ENST00000539121 BARGINQ6ZT62 677 aa9.1□□□□□ -0.95
USP30-210ENST00000539121 CDK19Q9BWU1 502 aa9.1□□□□□ -0.95
USP30-210ENST00000539121 ZNF219Q9P2Y4 722 aaPredicted RBP9.1□□□□□ -0.95
USP30-210ENST00000539121 ACEP12821 1306 aa9.09□□□□□ -0.95
USP30-210ENST00000539121 PSDA5PKW4 1024 aaPredicted RBP9.09□□□□□ -0.95
USP30-210ENST00000539121 C11orf95C9JLR9 678 aaPredicted RBP9.09□□□□□ -0.95
USP30-210ENST00000539121 EVA1CP58658 441 aa9.09□□□□□ -0.95
USP30-210ENST00000539121 THRAP3Q9Y2W1 955 aaKnown RBP9.09□□□□□ -0.95
USP30-210ENST00000539121 BRD4O60885 1362 aaPredicted RBP9.09□□□□□ -0.95
USP30-210ENST00000539121 CPDO75976 1380 aa9.09□□□□□ -0.95
USP30-210ENST00000539121 KIAA1210Q9ULL0 1709 aa9.08□□□□□ -0.96
USP30-210ENST00000539121 ZC3H6P61129 1189 aaKnown RBP9.08□□□□□ -0.96
USP30-210ENST00000539121 PDE3BQ13370 1112 aa9.08□□□□□ -0.96
USP30-210ENST00000539121 CHRNA2Q15822 529 aa9.08□□□□□ -0.96
USP30-210ENST00000539121 FAM182BQ5T319 152 aa9.08□□□□□ -0.96
USP30-210ENST00000539121 ABTB2Q8N961 1025 aa9.08□□□□□ -0.96
USP30-210ENST00000539121 CAMKK2Q96RR4 588 aa9.08□□□□□ -0.96
USP30-210ENST00000539121 STRN4Q9NRL3 753 aa9.08□□□□□ -0.96
USP30-210ENST00000539121 PHRF1Q9P1Y6 1649 aaKnown RBP9.08□□□□□ -0.96
USP30-210ENST00000539121 TNS1Q9HBL0 1735 aaKnown RBP9.08□□□□□ -0.96
USP30-210ENST00000539121 USP19O94966 1318 aa9.07□□□□□ -0.96
USP30-210ENST00000539121 SSH2Q76I76 1423 aa9.07□□□□□ -0.96
USP30-210ENST00000539121 ZBTB22O15209 634 aa9.07□□□□□ -0.96
USP30-210ENST00000539121 TRIM37O94972 964 aa9.07□□□□□ -0.96
USP30-210ENST00000539121 ZEB1P37275 1124 aaPredicted RBP9.07□□□□□ -0.96
USP30-210ENST00000539121 R3HDM1Q15032 1099 aaKnown RBP9.07□□□□□ -0.96
USP30-210ENST00000539121 EZH2Q15910 746 aaKnown RBP9.07□□□□□ -0.96
USP30-210ENST00000539121 NLRP13Q86W25 1043 aa9.07□□□□□ -0.96
USP30-210ENST00000539121 TCP11L2Q8N4U5 519 aa9.07□□□□□ -0.96
USP30-210ENST00000539121 TOPAZ1Q8N9V7 1692 aa9.07□□□□□ -0.96
USP30-210ENST00000539121 APBA3O96018 575 aa9.06□□□□□ -0.96
USP30-210ENST00000539121 GCP02774 474 aa9.06□□□□□ -0.96
USP30-210ENST00000539121 CAMTA1Q9Y6Y1 1673 aa9.05□□□□□ -0.96
USP30-210ENST00000539121 NUTM2GQ5VZR2 741 aa9.05□□□□□ -0.96
USP30-210ENST00000539121 LARP1Q6PKG0 1096 aaKnown RBP9.05□□□□□ -0.96
USP30-210ENST00000539121 USP35Q9P2H5 1018 aa9.05□□□□□ -0.96
USP30-210ENST00000539121 LMO7Q8WWI1 1683 aa9.04□□□□□ -0.96
USP30-210ENST00000539121 NRKQ7Z2Y5 1582 aa9.04□□□□□ -0.96
USP30-210ENST00000539121 NBPF14Q5TI25 921 aa9.04□□□□□ -0.96
USP30-210ENST00000539121 CENPJQ9HC77 1338 aaPredicted RBP9.04□□□□□ -0.96
USP30-210ENST00000539121 SRPK2P78362 688 aaKnown RBP9.03□□□□□ -0.96
USP30-210ENST00000539121 TRIM26Q12899 539 aaPredicted RBP9.03□□□□□ -0.96
USP30-210ENST00000539121 NBPF1Q3BBV0 1214 aa9.03□□□□□ -0.96
USP30-210ENST00000539121 PPIP5K1Q6PFW1 1433 aa9.03□□□□□ -0.96
USP30-210ENST00000539121 UTRNP46939 3433 aa9.03□□□□□ -0.96
USP30-210ENST00000539121 AATKQ6ZMQ8 1374 aa9.02□□□□□ -0.97
USP30-210ENST00000539121 CRB1P82279 1406 aa9.02□□□□□ -0.97
USP30-210ENST00000539121 PARP4Q9UKK3 1724 aaKnown RBP9.02□□□□□ -0.97
USP30-210ENST00000539121 COL5A2P05997 1499 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms